RNA–Protein interactions for RNA: ENST00000559942.5

PPP1R3E-204, Transcript of protein phosphatase 1 regulatory subunit 3E, humanhuman

TSL 1 (best)

Gene PPP1R3E, Length 1,187 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PPP1R3E-204ENST00000559942 DYNLL2Q96FJ2 89 aa11.23□□□□□ -0.61
PPP1R3E-204ENST00000559942 MEIS3Q99687 375 aa11.23□□□□□ -0.61
PPP1R3E-204ENST00000559942 RNF39Q9H2S5 420 aa11.23□□□□□ -0.61
PPP1R3E-204ENST00000559942 ADAM7Q9H2U9 754 aa11.23□□□□□ -0.61
PPP1R3E-204ENST00000559942 RC3H2Q9HBD1 1191 aaKnown RBP11.23□□□□□ -0.61
PPP1R3E-204ENST00000559942 SEMA4GQ9NTN9 838 aa11.23□□□□□ -0.61
PPP1R3E-204ENST00000559942 ZSCAN32Q9NX65 697 aa11.23□□□□□ -0.61
PPP1R3E-204ENST00000559942 GTF2IRD1Q9UHL9 959 aa11.23□□□□□ -0.61
PPP1R3E-204ENST00000559942 USTQ9Y2C2 406 aa11.23□□□□□ -0.61
PPP1R3E-204ENST00000559942 PLXNA4Q9HCM2 1894 aa11.23□□□□□ -0.61
PPP1R3E-204ENST00000559942 TM4SF5O14894 197 aa11.22□□□□□ -0.61
PPP1R3E-204ENST00000559942 LAMTOR5O43504 91 aa11.22□□□□□ -0.61
PPP1R3E-204ENST00000559942 PPFIA3O75145 1194 aa11.22□□□□□ -0.61
PPP1R3E-204ENST00000559942 HOXD8P13378 290 aaPredicted RBP11.22□□□□□ -0.61
PPP1R3E-204ENST00000559942 NCLP19338 710 aaKnown RBP11.22□□□□□ -0.61
PPP1R3E-204ENST00000559942 MTHFRP42898 656 aa11.22□□□□□ -0.61
PPP1R3E-204ENST00000559942 CSTF1Q05048 431 aaKnown RBP11.22□□□□□ -0.61
PPP1R3E-204ENST00000559942 ITIH3Q06033 890 aa11.22□□□□□ -0.61
PPP1R3E-204ENST00000559942 TPRNQ4KMQ1 711 aa11.22□□□□□ -0.61
PPP1R3E-204ENST00000559942 CCDC158Q5M9N0 1113 aa11.22□□□□□ -0.61
PPP1R3E-204ENST00000559942 LLGL2Q6P1M3 1020 aa11.22□□□□□ -0.61
PPP1R3E-204ENST00000559942 MAP4K1Q92918 833 aa11.22□□□□□ -0.61
PPP1R3E-204ENST00000559942 WNT8BQ93098 351 aa11.22□□□□□ -0.61
PPP1R3E-204ENST00000559942 NUP88Q99567 741 aaPredicted RBP11.22□□□□□ -0.61
PPP1R3E-204ENST00000559942 DBNDD2Q9BQY9 259 aa11.22□□□□□ -0.61
PPP1R3E-204ENST00000559942 KIAA1671Q9BY89 1806 aa11.22□□□□□ -0.61
PPP1R3E-204ENST00000559942 HOMER2Q9NSB8 354 aa11.22□□□□□ -0.61
PPP1R3E-204ENST00000559942 RXFP3Q9NSD7 469 aa11.22□□□□□ -0.61
PPP1R3E-204ENST00000559942 MCM9Q9NXL9 1143 aa11.22□□□□□ -0.61
PPP1R3E-204ENST00000559942 RAB23Q9ULC3 237 aa11.22□□□□□ -0.61
PPP1R3E-204ENST00000559942 TTC3P53804 2025 aa11.21□□□□□ -0.61
PPP1R3E-204ENST00000559942 MIA3Q5JRA6 1907 aa11.21□□□□□ -0.61
PPP1R3E-204ENST00000559942 KCNK5O95279 499 aa11.21□□□□□ -0.61
PPP1R3E-204ENST00000559942 EEF2P13639 858 aaKnown RBP11.21□□□□□ -0.61
PPP1R3E-204ENST00000559942 SPINK2P20155 84 aa11.21□□□□□ -0.61
PPP1R3E-204ENST00000559942 FOXC1Q12948 553 aa11.21□□□□□ -0.61
PPP1R3E-204ENST00000559942 CSRP2Q16527 193 aa11.21□□□□□ -0.61
PPP1R3E-204ENST00000559942 PHLDB3Q6NSJ2 640 aa11.21□□□□□ -0.61
PPP1R3E-204ENST00000559942 C7orf31Q8N865 590 aa11.21□□□□□ -0.61
PPP1R3E-204ENST00000559942 PRPF38AQ8NAV1 312 aaKnown RBP11.21□□□□□ -0.61
PPP1R3E-204ENST00000559942 ZNF689Q96CS4 500 aaPredicted RBP11.21□□□□□ -0.61
PPP1R3E-204ENST00000559942 ACAD9Q9H845 621 aa11.21□□□□□ -0.61
PPP1R3E-204ENST00000559942 KCNK12Q9HB15 430 aa11.21□□□□□ -0.61
PPP1R3E-204ENST00000559942 GOPCQ9HD26 462 aa11.21□□□□□ -0.61
PPP1R3E-204ENST00000559942 A1CFQ9NQ94 594 aaKnown RBP11.21□□□□□ -0.61
PPP1R3E-204ENST00000559942 SPATA6Q9NWH7 488 aaPredicted RBP11.21□□□□□ -0.61
PPP1R3E-204ENST00000559942 HDAC6Q9UBN7 1215 aa11.21□□□□□ -0.61
PPP1R3E-204ENST00000559942 DBR1Q9UK59 544 aaKnown RBP11.21□□□□□ -0.61
PPP1R3E-204ENST00000559942 CA14Q9ULX7 337 aa11.21□□□□□ -0.61
PPP1R3E-204ENST00000559942 NKRFO15226 690 aaKnown RBP eCLIP11.2□□□□□ -0.62
PPP1R3E-204ENST00000559942 NARSO43776 548 aaKnown RBP11.2□□□□□ -0.62
PPP1R3E-204ENST00000559942 RETP07949 1114 aa11.2□□□□□ -0.62
PPP1R3E-204ENST00000559942 GLULP15104 373 aa11.2□□□□□ -0.62
PPP1R3E-204ENST00000559942 THPOP40225 353 aa11.2□□□□□ -0.62
PPP1R3E-204ENST00000559942 G3BP1Q13283 466 aaKnown RBP eCLIP11.2□□□□□ -0.62
PPP1R3E-204ENST00000559942 LAIR1Q6GTX8 287 aa11.2□□□□□ -0.62
PPP1R3E-204ENST00000559942 RUFY4Q6ZNE9 571 aa11.2□□□□□ -0.62
PPP1R3E-204ENST00000559942 TMEFF1Q8IYR6 380 aa11.2□□□□□ -0.62
PPP1R3E-204ENST00000559942 RASGRP4Q8TDF6 673 aa11.2□□□□□ -0.62
PPP1R3E-204ENST00000559942 HDAC5Q9UQL6 1122 aa11.2□□□□□ -0.62
PPP1R3E-204ENST00000559942 GPSM3Q9Y4H4 160 aa11.2□□□□□ -0.62
PPP1R3E-204ENST00000559942 MRPL42Q9Y6G3 142 aaKnown RBP11.2□□□□□ -0.62
PPP1R3E-204ENST00000559942 WDFY3Q8IZQ1 3526 aa11.2□□□□□ -0.62
PPP1R3E-204ENST00000559942 PIEZO2Q9H5I5 2752 aa11.19□□□□□ -0.62
PPP1R3E-204ENST00000559942 RBM47A0AV96 593 aaKnown RBP11.19□□□□□ -0.62
PPP1R3E-204ENST00000559942 FOXD2O60548 495 aaPredicted RBP11.19□□□□□ -0.62
PPP1R3E-204ENST00000559942 EOMESO95936 686 aa11.19□□□□□ -0.62
PPP1R3E-204ENST00000559942 WEE2P0C1S8 567 aa11.19□□□□□ -0.62
PPP1R3E-204ENST00000559942 LPAL2Q16609 132 aa11.19□□□□□ -0.62
PPP1R3E-204ENST00000559942 CERS3Q8IU89 383 aa11.19□□□□□ -0.62
PPP1R3E-204ENST00000559942 MORC4Q8TE76 937 aa11.19□□□□□ -0.62
PPP1R3E-204ENST00000559942 SDR42E1Q8WUS8 393 aa11.19□□□□□ -0.62
PPP1R3E-204ENST00000559942 APBB2Q92870 758 aa11.19□□□□□ -0.62
PPP1R3E-204ENST00000559942 ACSF2Q96CM8 615 aaPredicted RBP11.19□□□□□ -0.62
PPP1R3E-204ENST00000559942 DOPEY1Q5JWR5 2465 aa11.19□□□□□ -0.62
PPP1R3E-204ENST00000559942 LAMA5O15230 3695 aa11.19□□□□□ -0.62
PPP1R3E-204ENST00000559942 TENM4Q6N022 2769 aa11.19□□□□□ -0.62
PPP1R3E-204ENST00000559942 BAZ2AQ9UIF9 1905 aaKnown RBP11.19□□□□□ -0.62
PPP1R3E-204ENST00000559942 SDK1Q7Z5N4 2213 aa11.19□□□□□ -0.62
PPP1R3E-204ENST00000559942 AKAP13Q12802 2813 aa11.18□□□□□ -0.62
PPP1R3E-204ENST00000559942 ARHGAP6O43182 974 aa11.18□□□□□ -0.62
PPP1R3E-204ENST00000559942 PLA2G2AP14555 144 aa11.18□□□□□ -0.62
PPP1R3E-204ENST00000559942 LIMK1P53667 647 aa11.18□□□□□ -0.62
PPP1R3E-204ENST00000559942 UBE3AQ05086 875 aa11.18□□□□□ -0.62
PPP1R3E-204ENST00000559942 PPP2R5BQ15173 497 aa11.18□□□□□ -0.62
PPP1R3E-204ENST00000559942 CCDC6Q16204 474 aa11.18□□□□□ -0.62
PPP1R3E-204ENST00000559942 TNNI3KQ59H18 835 aa11.18□□□□□ -0.62
PPP1R3E-204ENST00000559942 ATAT1Q5SQI0 421 aa11.18□□□□□ -0.62
PPP1R3E-204ENST00000559942 PDE12Q6L8Q7 609 aaKnown RBP11.18□□□□□ -0.62
PPP1R3E-204ENST00000559942 XRRA1Q6P2D8 792 aa11.18□□□□□ -0.62
PPP1R3E-204ENST00000559942 KAT2BQ92831 832 aa11.18□□□□□ -0.62
PPP1R3E-204ENST00000559942 NELL1Q92832 810 aa11.18□□□□□ -0.62
PPP1R3E-204ENST00000559942 CASP10Q92851 521 aa11.18□□□□□ -0.62
PPP1R3E-204ENST00000559942 COPS5Q92905 334 aa11.18□□□□□ -0.62
PPP1R3E-204ENST00000559942 RIOK1Q9BRS2 568 aaKnown RBP11.18□□□□□ -0.62
PPP1R3E-204ENST00000559942 ANTXR1Q9H6X2 564 aa11.18□□□□□ -0.62
PPP1R3E-204ENST00000559942 SLC38A10Q9HBR0 1119 aa11.18□□□□□ -0.62
PPP1R3E-204ENST00000559942 WASF3Q9UPY6 502 aa11.18□□□□□ -0.62
PPP1R3E-204ENST00000559942 FPGT-TNNI3KV9GXZ4 949 aa11.18□□□□□ -0.62
PPP1R3E-204ENST00000559942 PATJQ8NI35 1801 aa11.17□□□□□ -0.62
Retrieved 100 of 20,778 RNA–protein pairs in 47.5 ms