RNA–Protein interactions for RNA: ENST00000520746.1

HDAC2-208, Transcript of histone deacetylase 2, humanhuman

TSL 3

Gene HDAC2, Length 497 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC2-208ENST00000520746 ZNF143P52747 638 aaPredicted RBP5.7□□□□□ -1.5
HDAC2-208ENST00000520746 SLFN13Q68D06 897 aa5.7□□□□□ -1.5
HDAC2-208ENST00000520746 KLHL36Q8N4N3 616 aa5.7□□□□□ -1.5
HDAC2-208ENST00000520746 FAM169BQ8N8A8 192 aa5.7□□□□□ -1.5
HDAC2-208ENST00000520746 SREK1Q8WXA9 508 aaKnown RBP5.7□□□□□ -1.5
HDAC2-208ENST00000520746 DIO2Q92813 273 aa5.7□□□□□ -1.5
HDAC2-208ENST00000520746 TMEM169Q96HH4 297 aa5.7□□□□□ -1.5
HDAC2-208ENST00000520746 ZNF408Q9H9D4 720 aa5.7□□□□□ -1.5
HDAC2-208ENST00000520746 ING1Q9UK53 422 aaPredicted RBP5.7□□□□□ -1.5
HDAC2-208ENST00000520746 PCDHB4Q9Y5E5 795 aa5.7□□□□□ -1.5
HDAC2-208ENST00000520746 HGSO14964 777 aaPredicted RBP5.69□□□□□ -1.5
HDAC2-208ENST00000520746 SMAD7O15105 426 aaKnown RBP5.69□□□□□ -1.5
HDAC2-208ENST00000520746 B4GALT4O60513 344 aa5.69□□□□□ -1.5
HDAC2-208ENST00000520746 ZNF623O75123 536 aa5.69□□□□□ -1.5
HDAC2-208ENST00000520746 CYP7B1O75881 506 aa5.69□□□□□ -1.5
HDAC2-208ENST00000520746 STK10O94804 968 aaKnown RBP5.69□□□□□ -1.5
HDAC2-208ENST00000520746 LRG1P02750 347 aa5.69□□□□□ -1.5
HDAC2-208ENST00000520746 NAT2P11245 290 aa5.69□□□□□ -1.5
HDAC2-208ENST00000520746 GTF2A2P52657 109 aa5.69□□□□□ -1.5
HDAC2-208ENST00000520746 NFATC3Q12968 1075 aa5.69□□□□□ -1.5
HDAC2-208ENST00000520746 CHRNA2Q15822 529 aa5.69□□□□□ -1.5
HDAC2-208ENST00000520746 BTN2A2Q8WVV5 523 aa5.69□□□□□ -1.5
HDAC2-208ENST00000520746 PPP1R14AQ96A00 147 aa5.69□□□□□ -1.5
HDAC2-208ENST00000520746 WRNIP1Q96S55 665 aa5.69□□□□□ -1.5
HDAC2-208ENST00000520746 TMEM209Q96SK2 561 aa5.69□□□□□ -1.5
HDAC2-208ENST00000520746 FTSJ1Q9UET6 329 aa5.69□□□□□ -1.5
HDAC2-208ENST00000520746 COA3Q9Y2R0 106 aaPredicted RBP5.69□□□□□ -1.5
HDAC2-208ENST00000520746 MEFVO15553 781 aaPredicted RBP5.68□□□□□ -1.5
HDAC2-208ENST00000520746 TBX1O43435 398 aa5.68□□□□□ -1.5
HDAC2-208ENST00000520746 MYO1BO43795 1136 aa5.68□□□□□ -1.5
HDAC2-208ENST00000520746 TADA3O75528 432 aa5.68□□□□□ -1.5
HDAC2-208ENST00000520746 KCNAB2Q13303 367 aa5.68□□□□□ -1.5
HDAC2-208ENST00000520746 EMC4Q5J8M3 183 aa5.68□□□□□ -1.5
HDAC2-208ENST00000520746 STEAP3Q658P3 488 aa5.68□□□□□ -1.5
HDAC2-208ENST00000520746 TRMT10BQ6PF06 316 aaKnown RBP5.68□□□□□ -1.5
HDAC2-208ENST00000520746 TMC5Q6UXY8 1006 aa5.68□□□□□ -1.5
HDAC2-208ENST00000520746 RCBTB1Q8NDN9 531 aa5.68□□□□□ -1.5
HDAC2-208ENST00000520746 Q8TCH9 128 aa5.68□□□□□ -1.5
HDAC2-208ENST00000520746 DRC1Q96MC2 740 aa5.68□□□□□ -1.5
HDAC2-208ENST00000520746 SEMA4AQ9H3S1 761 aa5.68□□□□□ -1.5
HDAC2-208ENST00000520746 TESMINQ9Y4I5 508 aa5.68□□□□□ -1.5
HDAC2-208ENST00000520746 H7BY64 318 aa5.67□□□□□ -1.5
HDAC2-208ENST00000520746 COL6A1P12109 1028 aa5.67□□□□□ -1.5
HDAC2-208ENST00000520746 TNNI3KQ59H18 835 aa5.67□□□□□ -1.5
HDAC2-208ENST00000520746 KREMEN2Q8NCW0 462 aa5.67□□□□□ -1.5
HDAC2-208ENST00000520746 BARX1Q9HBU1 254 aaPredicted RBP5.67□□□□□ -1.5
HDAC2-208ENST00000520746 RBPJLQ9UBG7 517 aa5.67□□□□□ -1.5
HDAC2-208ENST00000520746 PRKAG3Q9UGI9 489 aa5.67□□□□□ -1.5
HDAC2-208ENST00000520746 ADAM29Q9UKF5 820 aa5.67□□□□□ -1.5
HDAC2-208ENST00000520746 ZDHHC9Q9Y397 364 aa5.67□□□□□ -1.5
HDAC2-208ENST00000520746 R3HCC1Q9Y3T6 440 aaKnown RBP5.67□□□□□ -1.5
HDAC2-208ENST00000520746 CNOT4O95628 575 aaKnown RBP5.66□□□□□ -1.5
HDAC2-208ENST00000520746 ECI1P42126 302 aa5.66□□□□□ -1.5
HDAC2-208ENST00000520746 TESK1Q15569 626 aa5.66□□□□□ -1.5
HDAC2-208ENST00000520746 ANKS3Q6ZW76 656 aa5.66□□□□□ -1.5
HDAC2-208ENST00000520746 NUDT10Q8NFP7 164 aa5.66□□□□□ -1.5
HDAC2-208ENST00000520746 PPIL4Q8WUA2 492 aaKnown RBP eCLIP5.66□□□□□ -1.5
HDAC2-208ENST00000520746 NUDT11Q96G61 164 aa5.66□□□□□ -1.5
HDAC2-208ENST00000520746 ACTR10Q9NZ32 417 aa5.66□□□□□ -1.5
HDAC2-208ENST00000520746 RB1CC1Q8TDY2 1594 aa5.65□□□□□ -1.5
HDAC2-208ENST00000520746 SCG5P05408 212 aa5.65□□□□□ -1.5
HDAC2-208ENST00000520746 SNRPB2P08579 225 aaKnown RBP5.65□□□□□ -1.5
HDAC2-208ENST00000520746 LCP1P13796 627 aa5.65□□□□□ -1.5
HDAC2-208ENST00000520746 HOXC12P31275 282 aa5.65□□□□□ -1.5
HDAC2-208ENST00000520746 LSAMPQ13449 338 aa5.65□□□□□ -1.5
HDAC2-208ENST00000520746 NCAPHQ15003 741 aa5.65□□□□□ -1.5
HDAC2-208ENST00000520746 PRSS53Q2L4Q9 553 aa5.65□□□□□ -1.5
HDAC2-208ENST00000520746 ACBD5Q5T8D3 534 aaPredicted RBP5.65□□□□□ -1.5
HDAC2-208ENST00000520746 LARP1BQ659C4 914 aaKnown RBP5.65□□□□□ -1.5
HDAC2-208ENST00000520746 CKAP2LQ8IYA6 745 aa5.65□□□□□ -1.5
HDAC2-208ENST00000520746 HNRNPLLQ8WVV9 542 aaKnown RBP5.65□□□□□ -1.5
HDAC2-208ENST00000520746 USP35Q9P2H5 1018 aa5.65□□□□□ -1.5
HDAC2-208ENST00000520746 MYOTQ9UBF9 498 aa5.65□□□□□ -1.5
HDAC2-208ENST00000520746 PCDHA2Q9Y5H9 948 aa5.65□□□□□ -1.5
HDAC2-208ENST00000520746 KLHL18O94889 574 aa5.64□□□□□ -1.51
HDAC2-208ENST00000520746 LTBRP36941 435 aa5.64□□□□□ -1.51
HDAC2-208ENST00000520746 SF1Q15637 639 aaKnown RBP5.64□□□□□ -1.51
HDAC2-208ENST00000520746 PHF19Q5T6S3 580 aa5.64□□□□□ -1.51
HDAC2-208ENST00000520746 ZNF227Q86WZ6 799 aa5.64□□□□□ -1.51
HDAC2-208ENST00000520746 PROSER1Q86XN7 944 aa5.64□□□□□ -1.51
HDAC2-208ENST00000520746 PPIL6Q8IXY8 311 aa5.64□□□□□ -1.51
HDAC2-208ENST00000520746 ARMC5Q96C12 935 aa5.64□□□□□ -1.51
HDAC2-208ENST00000520746 CHAMP1Q96JM3 812 aa5.64□□□□□ -1.51
HDAC2-208ENST00000520746 HIRIP3Q9BW71 556 aaPredicted RBP5.64□□□□□ -1.51
HDAC2-208ENST00000520746 ZNF341Q9BYN7 854 aa5.64□□□□□ -1.51
HDAC2-208ENST00000520746 EPB41L1Q9H4G0 881 aa5.64□□□□□ -1.51
HDAC2-208ENST00000520746 CLDND1Q9NY35 253 aa5.64□□□□□ -1.51
HDAC2-208ENST00000520746 HSPBP1Q9NZL4 362 aa5.64□□□□□ -1.51
HDAC2-208ENST00000520746 NPIPB8E9PQR5 432 aa5.63□□□□□ -1.51
HDAC2-208ENST00000520746 FOXS1O43638 330 aa5.63□□□□□ -1.51
HDAC2-208ENST00000520746 ITGAVP06756 1048 aa5.63□□□□□ -1.51
HDAC2-208ENST00000520746 DENND5AQ6IQ26 1287 aa5.63□□□□□ -1.51
HDAC2-208ENST00000520746 RALYLQ86SE5 291 aaKnown RBP5.63□□□□□ -1.51
HDAC2-208ENST00000520746 PMFBP1Q8TBY8 1022 aa5.63□□□□□ -1.51
HDAC2-208ENST00000520746 PHOSPHO1Q8TCT1 267 aa5.63□□□□□ -1.51
HDAC2-208ENST00000520746 GNRHR2Q96P88 292 aa5.63□□□□□ -1.51
HDAC2-208ENST00000520746 DNAJC2Q99543 621 aaKnown RBP5.63□□□□□ -1.51
HDAC2-208ENST00000520746 TRIM55Q9BYV6 548 aa5.63□□□□□ -1.51
HDAC2-208ENST00000520746 SEC61A2Q9H9S3 476 aa5.63□□□□□ -1.51
HDAC2-208ENST00000520746 KLF4O43474 513 aa5.62□□□□□ -1.51
Retrieved 100 of 20,778 RNA–protein pairs in 53.3 ms