RNA–Protein interactions for RNA: ENST00000502250.5

ATXN3-206, Transcript of ataxin 3, humanhuman

TSL 1 (best) BASIC

Gene ATXN3, Length 1,259 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATXN3-206ENST00000502250 GNAT1P11488 350 aa8.6□□□□□ -1.03
ATXN3-206ENST00000502250 GLDCP23378 1020 aa8.6□□□□□ -1.03
ATXN3-206ENST00000502250 TAF7LQ5H9L4 462 aa8.6□□□□□ -1.03
ATXN3-206ENST00000502250 C16orf59Q7L2K0 433 aa8.6□□□□□ -1.03
ATXN3-206ENST00000502250 ZC3H7AQ8IWR0 971 aaKnown RBP8.6□□□□□ -1.03
ATXN3-206ENST00000502250 UHMK1Q8TAS1 419 aaKnown RBP8.6□□□□□ -1.03
ATXN3-206ENST00000502250 PPP1R16BQ96T49 567 aa8.6□□□□□ -1.03
ATXN3-206ENST00000502250 RNF38Q9H0F5 515 aa8.6□□□□□ -1.03
ATXN3-206ENST00000502250 SMOC1Q9H4F8 434 aa8.6□□□□□ -1.03
ATXN3-206ENST00000502250 CNTD2Q9H8S5 307 aa8.6□□□□□ -1.03
ATXN3-206ENST00000502250 PALD1Q9ULE6 856 aa8.6□□□□□ -1.03
ATXN3-206ENST00000502250 SIT1Q9Y3P8 196 aa8.6□□□□□ -1.03
ATXN3-206ENST00000502250 NUB1Q9Y5A7 615 aa8.6□□□□□ -1.03
ATXN3-206ENST00000502250 HCFC2Q9Y5Z7 792 aa8.6□□□□□ -1.03
ATXN3-206ENST00000502250 DNAJC8O75937 253 aaPredicted RBP8.59□□□□□ -1.03
ATXN3-206ENST00000502250 MED14OSP0DP75 135 aa8.59□□□□□ -1.03
ATXN3-206ENST00000502250 PIP4K2CQ8TBX8 421 aa8.59□□□□□ -1.03
ATXN3-206ENST00000502250 KCNJ15Q99712 375 aa8.59□□□□□ -1.03
ATXN3-206ENST00000502250 CELF4Q9BZC1 486 aaKnown RBP8.59□□□□□ -1.03
ATXN3-206ENST00000502250 PDGFDQ9GZP0 370 aaPredicted RBP8.59□□□□□ -1.03
ATXN3-206ENST00000502250 RXFP1Q9HBX9 757 aa8.59□□□□□ -1.03
ATXN3-206ENST00000502250 PCDHB4Q9Y5E5 795 aa8.59□□□□□ -1.03
ATXN3-206ENST00000502250 IQGAP2Q13576 1575 aa8.58□□□□□ -1.04
ATXN3-206ENST00000502250 CKMP06732 381 aa8.58□□□□□ -1.04
ATXN3-206ENST00000502250 IGFALSP35858 605 aa8.58□□□□□ -1.04
ATXN3-206ENST00000502250 TXKP42681 527 aa8.58□□□□□ -1.04
ATXN3-206ENST00000502250 DLG4P78352 724 aa8.58□□□□□ -1.04
ATXN3-206ENST00000502250 ZNF200P98182 395 aaPredicted RBP8.58□□□□□ -1.04
ATXN3-206ENST00000502250 TARBP2Q15633 366 aaKnown RBP8.58□□□□□ -1.04
ATXN3-206ENST00000502250 TMEM132EQ6IEE7 984 aa8.58□□□□□ -1.04
ATXN3-206ENST00000502250 LDHDQ86WU2 507 aa8.58□□□□□ -1.04
ATXN3-206ENST00000502250 MIB1Q86YT6 1006 aa8.58□□□□□ -1.04
ATXN3-206ENST00000502250 CPA5Q8WXQ8 436 aa8.58□□□□□ -1.04
ATXN3-206ENST00000502250 ALG3Q92685 438 aa8.58□□□□□ -1.04
ATXN3-206ENST00000502250 KCNK12Q9HB15 430 aa8.58□□□□□ -1.04
ATXN3-206ENST00000502250 GCM1Q9NP62 436 aa8.58□□□□□ -1.04
ATXN3-206ENST00000502250 PCDHA5Q9Y5H7 936 aa8.58□□□□□ -1.04
ATXN3-206ENST00000502250 N4BP3O15049 544 aa8.57□□□□□ -1.04
ATXN3-206ENST00000502250 CDR1P51861 262 aa8.57□□□□□ -1.04
ATXN3-206ENST00000502250 GPR19Q15760 415 aa8.57□□□□□ -1.04
ATXN3-206ENST00000502250 DALRD3Q5D0E6 543 aaKnown RBP8.57□□□□□ -1.04
ATXN3-206ENST00000502250 SYDE1Q6ZW31 735 aaPredicted RBP8.57□□□□□ -1.04
ATXN3-206ENST00000502250 MILR1Q7Z6M3 343 aa8.57□□□□□ -1.04
ATXN3-206ENST00000502250 AMIGO3Q86WK7 504 aa8.57□□□□□ -1.04
ATXN3-206ENST00000502250 TRIM48Q8IWZ4 208 aa8.57□□□□□ -1.04
ATXN3-206ENST00000502250 NIM1KQ8IY84 436 aa8.57□□□□□ -1.04
ATXN3-206ENST00000502250 MZB1Q8WU39 189 aa8.57□□□□□ -1.04
ATXN3-206ENST00000502250 SLC38A3Q99624 504 aa8.57□□□□□ -1.04
ATXN3-206ENST00000502250 MYOTQ9UBF9 498 aa8.57□□□□□ -1.04
ATXN3-206ENST00000502250 CARMIL1Q5VZK9 1371 aa8.57□□□□□ -1.04
ATXN3-206ENST00000502250 ADGRL1O94910 1474 aa8.57□□□□□ -1.04
ATXN3-206ENST00000502250 TTBK1Q5TCY1 1321 aaPredicted RBP8.56□□□□□ -1.04
ATXN3-206ENST00000502250 TCRBV5S2A0A599 114 aa8.56□□□□□ -1.04
ATXN3-206ENST00000502250 CCDC66A2RUB6 948 aa8.56□□□□□ -1.04
ATXN3-206ENST00000502250 TSPAN15O95858 294 aa8.56□□□□□ -1.04
ATXN3-206ENST00000502250 SRGAP2CP0DJJ0 459 aa8.56□□□□□ -1.04
ATXN3-206ENST00000502250 KCNA6P17658 529 aa8.56□□□□□ -1.04
ATXN3-206ENST00000502250 SDSP20132 328 aa8.56□□□□□ -1.04
ATXN3-206ENST00000502250 ST5P78524 1137 aa8.56□□□□□ -1.04
ATXN3-206ENST00000502250 LACTBP83111 547 aaPredicted RBP8.56□□□□□ -1.04
ATXN3-206ENST00000502250 ZCCHC8Q6NZY4 707 aaKnown RBP8.56□□□□□ -1.04
ATXN3-206ENST00000502250 TTLL11Q8NHH1 800 aa8.56□□□□□ -1.04
ATXN3-206ENST00000502250 KCNN1Q92952 543 aa8.56□□□□□ -1.04
ATXN3-206ENST00000502250 MFSD3Q96ES6 412 aa8.56□□□□□ -1.04
ATXN3-206ENST00000502250 CATSPERZQ9NTU4 200 aa8.56□□□□□ -1.04
ATXN3-206ENST00000502250 ASH2LQ9UBL3 628 aa8.56□□□□□ -1.04
ATXN3-206ENST00000502250 TNPO3Q9Y5L0 923 aaKnown RBP8.56□□□□□ -1.04
ATXN3-206ENST00000502250 ABCC2Q92887 1545 aa8.55□□□□□ -1.04
ATXN3-206ENST00000502250 ETV2O00321 342 aaPredicted RBP8.55□□□□□ -1.04
ATXN3-206ENST00000502250 SMARCA5O60264 1052 aaPredicted RBP8.55□□□□□ -1.04
ATXN3-206ENST00000502250 CLSTN1O94985 981 aa8.55□□□□□ -1.04
ATXN3-206ENST00000502250 ASGR2P07307 311 aa8.55□□□□□ -1.04
ATXN3-206ENST00000502250 TMEM253P0C7T8 217 aa8.55□□□□□ -1.04
ATXN3-206ENST00000502250 PYGMP11217 842 aa8.55□□□□□ -1.04
ATXN3-206ENST00000502250 NCAM1P13591 858 aa8.55□□□□□ -1.04
ATXN3-206ENST00000502250 PFKLP17858 780 aa8.55□□□□□ -1.04
ATXN3-206ENST00000502250 IGFBP6P24592 240 aaPredicted RBP8.55□□□□□ -1.04
ATXN3-206ENST00000502250 PMLP29590 882 aa8.55□□□□□ -1.04
ATXN3-206ENST00000502250 FLT3P36888 993 aa8.55□□□□□ -1.04
ATXN3-206ENST00000502250 EPHA5P54756 1037 aa8.55□□□□□ -1.04
ATXN3-206ENST00000502250 CRY1Q16526 586 aa8.55□□□□□ -1.04
ATXN3-206ENST00000502250 DDX53Q86TM3 631 aaKnown RBP8.55□□□□□ -1.04
ATXN3-206ENST00000502250 FAM126BQ8IXS8 530 aa8.55□□□□□ -1.04
ATXN3-206ENST00000502250 SLKQ9H2G2 1235 aaPredicted RBP8.55□□□□□ -1.04
ATXN3-206ENST00000502250 DSEQ9UL01 958 aa8.55□□□□□ -1.04
ATXN3-206ENST00000502250 CBLCQ9ULV8 474 aa8.55□□□□□ -1.04
ATXN3-206ENST00000502250 CTTNBP2Q8WZ74 1663 aa8.55□□□□□ -1.04
ATXN3-206ENST00000502250 PTPRGP23470 1445 aa8.54□□□□□ -1.04
ATXN3-206ENST00000502250 DISP1Q96F81 1524 aa8.54□□□□□ -1.04
ATXN3-206ENST00000502250 ZCCHC11Q5TAX3 1644 aaKnown RBP8.54□□□□□ -1.04
ATXN3-206ENST00000502250 GLI2P10070 1586 aa8.54□□□□□ -1.04
ATXN3-206ENST00000502250 ZNF561-AS1K7EIQ3 104 aa8.54□□□□□ -1.04
ATXN3-206ENST00000502250 IRS4O14654 1257 aaPredicted RBP8.54□□□□□ -1.04
ATXN3-206ENST00000502250 NKRFO15226 690 aaKnown RBP eCLIP8.54□□□□□ -1.04
ATXN3-206ENST00000502250 OPA1O60313 960 aa8.54□□□□□ -1.04
ATXN3-206ENST00000502250 KRT1P04264 644 aa8.54□□□□□ -1.04
ATXN3-206ENST00000502250 COL6A2P12110 1019 aa8.54□□□□□ -1.04
ATXN3-206ENST00000502250 PDE6AP16499 860 aa8.54□□□□□ -1.04
ATXN3-206ENST00000502250 POU3F2P20265 443 aaPredicted RBP8.54□□□□□ -1.04
ATXN3-206ENST00000502250 TM4SF20Q53R12 229 aa8.54□□□□□ -1.04
Retrieved 100 of 20,778 RNA–protein pairs in 35.2 ms