RNA–Protein interactions for RNA: ENST00000484088.5

ITGB1-213, Transcript of integrin subunit beta 1, humanhuman

TSL 4

Gene ITGB1, Length 580 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ITGB1-213ENST00000484088 SGSM2O43147 1006 aa3.35□□□□□ -1.87
ITGB1-213ENST00000484088 PRICKLE3O43900 615 aaPredicted RBP3.35□□□□□ -1.87
ITGB1-213ENST00000484088 PDE8AO60658 829 aa3.35□□□□□ -1.87
ITGB1-213ENST00000484088 EFCAB14O75071 495 aa3.35□□□□□ -1.87
ITGB1-213ENST00000484088 EYA4O95677 639 aa3.35□□□□□ -1.87
ITGB1-213ENST00000484088 ASLP04424 464 aa3.35□□□□□ -1.87
ITGB1-213ENST00000484088 FPR2P25090 351 aa3.35□□□□□ -1.87
ITGB1-213ENST00000484088 BCL6P41182 706 aa3.35□□□□□ -1.87
ITGB1-213ENST00000484088 CAP1Q01518 475 aa3.35□□□□□ -1.87
ITGB1-213ENST00000484088 SKOR2Q2VWA4 1001 aaPredicted RBP3.35□□□□□ -1.87
ITGB1-213ENST00000484088 TMEM132EQ6IEE7 984 aa3.35□□□□□ -1.87
ITGB1-213ENST00000484088 IQCEQ6IPM2 695 aa3.35□□□□□ -1.87
ITGB1-213ENST00000484088 CNKSR3Q6P9H4 555 aa3.35□□□□□ -1.87
ITGB1-213ENST00000484088 OVCH1Q7RTY7 1134 aa3.35□□□□□ -1.87
ITGB1-213ENST00000484088 FILIP1Q7Z7B0 1213 aa3.35□□□□□ -1.87
ITGB1-213ENST00000484088 SAPCD2Q86UD0 394 aa3.35□□□□□ -1.87
ITGB1-213ENST00000484088 IFNL3Q8IZI9 196 aa3.35□□□□□ -1.87
ITGB1-213ENST00000484088 LINC01356Q8N9X3 169 aa3.35□□□□□ -1.87
ITGB1-213ENST00000484088 TSPAN17Q96FV3 270 aa3.35□□□□□ -1.87
ITGB1-213ENST00000484088 PWWP2AQ96N64 755 aa3.35□□□□□ -1.87
ITGB1-213ENST00000484088 BRINP2Q9C0B6 783 aa3.35□□□□□ -1.87
ITGB1-213ENST00000484088 CBLCQ9ULV8 474 aa3.35□□□□□ -1.87
ITGB1-213ENST00000484088 DUSP10Q9Y6W6 482 aa3.35□□□□□ -1.87
ITGB1-213ENST00000484088 TRBV23OR9-2A0A075B6M9 112 aa3.34□□□□□ -1.87
ITGB1-213ENST00000484088 F8W031 263 aaPredicted RBP3.34□□□□□ -1.87
ITGB1-213ENST00000484088 AQP7O14520 342 aa3.34□□□□□ -1.87
ITGB1-213ENST00000484088 ABLIM1O14639 778 aa3.34□□□□□ -1.87
ITGB1-213ENST00000484088 DNAJC6O75061 913 aa3.34□□□□□ -1.87
ITGB1-213ENST00000484088 GLRX3O76003 335 aaKnown RBP3.34□□□□□ -1.87
ITGB1-213ENST00000484088 TBC1D8O95759 1140 aa3.34□□□□□ -1.87
ITGB1-213ENST00000484088 AMY2AP04746 511 aa3.34□□□□□ -1.87
ITGB1-213ENST00000484088 C8BP07358 591 aa3.34□□□□□ -1.87
ITGB1-213ENST00000484088 MYCLP1P12525 358 aaPredicted RBP3.34□□□□□ -1.87
ITGB1-213ENST00000484088 AMY2BP19961 511 aa3.34□□□□□ -1.87
ITGB1-213ENST00000484088 IGFALSP35858 605 aa3.34□□□□□ -1.87
ITGB1-213ENST00000484088 SLURP1P55000 103 aa3.34□□□□□ -1.87
ITGB1-213ENST00000484088 FOXO4P98177 505 aa3.34□□□□□ -1.87
ITGB1-213ENST00000484088 NR1I3Q14994 352 aa3.34□□□□□ -1.87
ITGB1-213ENST00000484088 PTPROQ16827 1216 aa3.34□□□□□ -1.87
ITGB1-213ENST00000484088 ZNF385BQ569K4 471 aa3.34□□□□□ -1.87
ITGB1-213ENST00000484088 TCERG1LQ5VWI1 586 aa3.34□□□□□ -1.87
ITGB1-213ENST00000484088 ZCCHC8Q6NZY4 707 aaKnown RBP3.34□□□□□ -1.87
ITGB1-213ENST00000484088 PKN3Q6P5Z2 889 aa3.34□□□□□ -1.87
ITGB1-213ENST00000484088 ZC3H14Q6PJT7 736 aaKnown RBP3.34□□□□□ -1.87
ITGB1-213ENST00000484088 JAMLQ86YT9 394 aa3.34□□□□□ -1.87
ITGB1-213ENST00000484088 FAM26EQ8N5C1 309 aa3.34□□□□□ -1.87
ITGB1-213ENST00000484088 SH3RF2Q8TEC5 729 aa3.34□□□□□ -1.87
ITGB1-213ENST00000484088 STAG1Q8WVM7 1258 aa3.34□□□□□ -1.87
ITGB1-213ENST00000484088 PUS7Q96PZ0 661 aaKnown RBP3.34□□□□□ -1.87
ITGB1-213ENST00000484088 ADAM7Q9H2U9 754 aa3.34□□□□□ -1.87
ITGB1-213ENST00000484088 IPPKQ9H8X2 491 aa3.34□□□□□ -1.87
ITGB1-213ENST00000484088 SPC25Q9HBM1 224 aa3.34□□□□□ -1.87
ITGB1-213ENST00000484088 SMURF1Q9HCE7 757 aa3.34□□□□□ -1.87
ITGB1-213ENST00000484088 PCDH12Q9NPG4 1184 aa3.34□□□□□ -1.87
ITGB1-213ENST00000484088 RTEL1Q9NZ71 1219 aa3.34□□□□□ -1.87
ITGB1-213ENST00000484088 MAPRE3Q9UPY8 281 aa3.34□□□□□ -1.87
ITGB1-213ENST00000484088 PCDHA2Q9Y5H9 948 aa3.34□□□□□ -1.87
ITGB1-213ENST00000484088 TIMM13Q9Y5L4 95 aaPredicted RBP3.34□□□□□ -1.87
ITGB1-213ENST00000484088 COL4A3BPQ9Y5P4 624 aa3.34□□□□□ -1.87
ITGB1-213ENST00000484088 SH3D21A4FU49 640 aa3.33□□□□□ -1.88
ITGB1-213ENST00000484088 H7BY64 318 aa3.33□□□□□ -1.88
ITGB1-213ENST00000484088 ZNF561-AS1K7EIQ3 104 aa3.33□□□□□ -1.88
ITGB1-213ENST00000484088 CBX4O00257 560 aa3.33□□□□□ -1.88
ITGB1-213ENST00000484088 FOXD2O60548 495 aaPredicted RBP3.33□□□□□ -1.88
ITGB1-213ENST00000484088 SOD2P04179 222 aa3.33□□□□□ -1.88
ITGB1-213ENST00000484088 NTRK1P04629 796 aa3.33□□□□□ -1.88
ITGB1-213ENST00000484088 GRK2P25098 689 aa3.33□□□□□ -1.88
ITGB1-213ENST00000484088 GRK3P35626 688 aa3.33□□□□□ -1.88
ITGB1-213ENST00000484088 CDKN1CP49918 316 aaPredicted RBP3.33□□□□□ -1.88
ITGB1-213ENST00000484088 LACTBP83111 547 aaPredicted RBP3.33□□□□□ -1.88
ITGB1-213ENST00000484088 GUCY1A3Q02108 690 aa3.33□□□□□ -1.88
ITGB1-213ENST00000484088 DSG1Q02413 1049 aa3.33□□□□□ -1.88
ITGB1-213ENST00000484088 PAK1Q13153 545 aa3.33□□□□□ -1.88
ITGB1-213ENST00000484088 LSAMPQ13449 338 aa3.33□□□□□ -1.88
ITGB1-213ENST00000484088 KIZQ2M2Z5 673 aa3.33□□□□□ -1.88
ITGB1-213ENST00000484088 PRR31Q5SQ13 230 aa3.33□□□□□ -1.88
ITGB1-213ENST00000484088 BICRALQ6AI39 1079 aa3.33□□□□□ -1.88
ITGB1-213ENST00000484088 LIPIQ6XZB0 460 aa3.33□□□□□ -1.88
ITGB1-213ENST00000484088 LHFPL2Q6ZUX7 228 aa3.33□□□□□ -1.88
ITGB1-213ENST00000484088 OTOP1Q7RTM1 612 aa3.33□□□□□ -1.88
ITGB1-213ENST00000484088 B3GNT8Q7Z7M8 397 aa3.33□□□□□ -1.88
ITGB1-213ENST00000484088 RIOX2Q8IUF8 465 aa3.33□□□□□ -1.88
ITGB1-213ENST00000484088 TEX2Q8IWB9 1127 aa3.33□□□□□ -1.88
ITGB1-213ENST00000484088 UBR7Q8N806 425 aa3.33□□□□□ -1.88
ITGB1-213ENST00000484088 LINC00482Q8N8I6 264 aa3.33□□□□□ -1.88
ITGB1-213ENST00000484088 NAT16Q8N8M0 369 aa3.33□□□□□ -1.88
ITGB1-213ENST00000484088 SYTL4Q96C24 671 aaPredicted RBP3.33□□□□□ -1.88
ITGB1-213ENST00000484088 MAGEB10Q96LZ2 347 aaPredicted RBP3.33□□□□□ -1.88
ITGB1-213ENST00000484088 IPO9Q96P70 1041 aaKnown RBP3.33□□□□□ -1.88
ITGB1-213ENST00000484088 JAM3Q9BX67 310 aa3.33□□□□□ -1.88
ITGB1-213ENST00000484088 KRTAP3-1Q9BYR8 98 aa3.33□□□□□ -1.88
ITGB1-213ENST00000484088 CELF4Q9BZC1 486 aaKnown RBP3.33□□□□□ -1.88
ITGB1-213ENST00000484088 IGF2BP1Q9NZI8 577 aaKnown RBP eCLIP3.33□□□□□ -1.885e-6■□□□□ 9.7
ITGB1-213ENST00000484088 COQ6Q9Y2Z9 468 aa3.33□□□□□ -1.88
ITGB1-213ENST00000484088 TELO2Q9Y4R8 837 aa3.33□□□□□ -1.88
ITGB1-213ENST00000484088 B8ZZF3 427 aa3.32□□□□□ -1.88
ITGB1-213ENST00000484088 NKRFO15226 690 aaKnown RBP eCLIP3.32□□□□□ -1.88
ITGB1-213ENST00000484088 JMJD7P0C870 316 aa3.32□□□□□ -1.88
ITGB1-213ENST00000484088 ZBTB48P10074 688 aaPredicted RBP3.32□□□□□ -1.88
ITGB1-213ENST00000484088 PYGMP11217 842 aa3.32□□□□□ -1.88
Retrieved 100 of 20,778 RNA–protein pairs in 43.2 ms