RNA–Protein interactions for RNA: ENST00000479712.1

UPF3A-205, Transcript of UPF3A, regulator of nonsense mediated mRNA decay, humanhuman

TSL 2

Gene UPF3A, Length 423 nt, Biotype processed transcript.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UPF3A-205ENST00000479712 ASLP04424 464 aa7.22□□□□□ -1.25
UPF3A-205ENST00000479712 APPP05067 770 aa7.22□□□□□ -1.25
UPF3A-205ENST00000479712 SYPP08247 313 aa7.22□□□□□ -1.25
UPF3A-205ENST00000479712 GSTM1P09488 218 aa7.22□□□□□ -1.25
UPF3A-205ENST00000479712 TPP2P29144 1249 aaPredicted RBP7.22□□□□□ -1.25
UPF3A-205ENST00000479712 CLCN7P51798 805 aa7.22□□□□□ -1.25
UPF3A-205ENST00000479712 PCBP3P57721 371 aaKnown RBP7.22□□□□□ -1.25
UPF3A-205ENST00000479712 NFKB2Q00653 900 aa7.22□□□□□ -1.25
UPF3A-205ENST00000479712 ACBD5Q5T8D3 534 aaPredicted RBP7.22□□□□□ -1.25
UPF3A-205ENST00000479712 RCSD1Q6JBY9 416 aa7.22□□□□□ -1.25
UPF3A-205ENST00000479712 KCNT2Q6UVM3 1135 aa7.22□□□□□ -1.25
UPF3A-205ENST00000479712 JAMLQ86YT9 394 aa7.22□□□□□ -1.25
UPF3A-205ENST00000479712 SLC17A8Q8NDX2 589 aa7.22□□□□□ -1.25
UPF3A-205ENST00000479712 NPLOC4Q8TAT6 608 aa7.22□□□□□ -1.25
UPF3A-205ENST00000479712 FRS2Q8WU20 508 aa7.22□□□□□ -1.25
UPF3A-205ENST00000479712 SCLYQ96I15 445 aa7.22□□□□□ -1.25
UPF3A-205ENST00000479712 MAGEB10Q96LZ2 347 aaPredicted RBP7.22□□□□□ -1.25
UPF3A-205ENST00000479712 HSPA12BQ96MM6 686 aa7.22□□□□□ -1.25
UPF3A-205ENST00000479712 FAM126AQ9BYI3 521 aaPredicted RBP7.22□□□□□ -1.25
UPF3A-205ENST00000479712 DDX56Q9NY93 547 aaKnown RBP7.22□□□□□ -1.25
UPF3A-205ENST00000479712 ZSWIM5Q9P217 1185 aa7.22□□□□□ -1.25
UPF3A-205ENST00000479712 TECPR2O15040 1411 aa7.21□□□□□ -1.25
UPF3A-205ENST00000479712 WASH4PA8MWX3 477 aa7.21□□□□□ -1.26
UPF3A-205ENST00000479712 RASGRP1O95267 797 aa7.21□□□□□ -1.26
UPF3A-205ENST00000479712 CRTAMO95727 393 aa7.21□□□□□ -1.26
UPF3A-205ENST00000479712 IGLV1-40P01703 118 aa7.21□□□□□ -1.26
UPF3A-205ENST00000479712 POU3F3P20264 500 aaPredicted RBP7.21□□□□□ -1.26
UPF3A-205ENST00000479712 IGFALSP35858 605 aa7.21□□□□□ -1.26
UPF3A-205ENST00000479712 NEK4P51957 841 aa7.21□□□□□ -1.26
UPF3A-205ENST00000479712 ZNF460Q14592 562 aa7.21□□□□□ -1.26
UPF3A-205ENST00000479712 CPSF6Q16630 551 aaKnown RBP eCLIP7.21□□□□□ -1.262e-7■■■□□ 16.2
UPF3A-205ENST00000479712 TXNRD1Q16881 649 aa7.21□□□□□ -1.26
UPF3A-205ENST00000479712 EEF1DP3Q658K8 133 aa7.21□□□□□ -1.26
UPF3A-205ENST00000479712 THAP5Q7Z6K1 395 aa7.21□□□□□ -1.26
UPF3A-205ENST00000479712 AHI1Q8N157 1196 aa7.21□□□□□ -1.26
UPF3A-205ENST00000479712 PRPF38AQ8NAV1 312 aaKnown RBP7.21□□□□□ -1.26
UPF3A-205ENST00000479712 LINC00116Q8NCU8 138 aa7.21□□□□□ -1.26
UPF3A-205ENST00000479712 PHF20Q9BVI0 1012 aa7.21□□□□□ -1.26
UPF3A-205ENST00000479712 CLEC1BQ9P126 229 aa7.21□□□□□ -1.26
UPF3A-205ENST00000479712 MCM8Q9UJA3 840 aa7.21□□□□□ -1.26
UPF3A-205ENST00000479712 TCFL5Q9UL49 500 aa7.21□□□□□ -1.26
UPF3A-205ENST00000479712 CCDC141Q6ZP82 1450 aa7.2□□□□□ -1.26
UPF3A-205ENST00000479712 TCRBV16S1A1N1A0A5B0 115 aa7.2□□□□□ -1.26
UPF3A-205ENST00000479712 PLS3P13797 630 aa7.2□□□□□ -1.26
UPF3A-205ENST00000479712 NAT1P18440 290 aa7.2□□□□□ -1.26
UPF3A-205ENST00000479712 FSTP19883 344 aa7.2□□□□□ -1.26
UPF3A-205ENST00000479712 FLT3P36888 993 aa7.2□□□□□ -1.26
UPF3A-205ENST00000479712 CDKN1CP49918 316 aaPredicted RBP7.2□□□□□ -1.26
UPF3A-205ENST00000479712 HABP4Q5JVS0 413 aaKnown RBP7.2□□□□□ -1.26
UPF3A-205ENST00000479712 RTP2Q5QGT7 225 aa7.2□□□□□ -1.26
UPF3A-205ENST00000479712 E4F1Q66K89 784 aaPredicted RBP7.2□□□□□ -1.26
UPF3A-205ENST00000479712 RSPO2Q6UXX9 243 aaPredicted RBP7.2□□□□□ -1.26
UPF3A-205ENST00000479712 MTDHQ86UE4 582 aaKnown RBP7.2□□□□□ -1.26
UPF3A-205ENST00000479712 USHBP1Q8N6Y0 703 aa7.2□□□□□ -1.26
UPF3A-205ENST00000479712 LEO1Q8WVC0 666 aaPredicted RBP7.2□□□□□ -1.26
UPF3A-205ENST00000479712 UBE2FQ969M7 185 aa7.2□□□□□ -1.26
UPF3A-205ENST00000479712 ZFYVE21Q9BQ24 234 aa7.2□□□□□ -1.26
UPF3A-205ENST00000479712 FOXP3Q9BZS1 431 aa7.2□□□□□ -1.26
UPF3A-205ENST00000479712 METTL14Q9HCE5 456 aaKnown RBP7.2□□□□□ -1.26
UPF3A-205ENST00000479712 DUSP13Q9UII6 198 aa7.2□□□□□ -1.26
UPF3A-205ENST00000479712 TMEFF2Q9UIK5 374 aaPredicted RBP7.2□□□□□ -1.26
UPF3A-205ENST00000479712 PLAGL2Q9UPG8 496 aa7.2□□□□□ -1.26
UPF3A-205ENST00000479712 CCNB3Q8WWL7 1395 aa7.2□□□□□ -1.26
UPF3A-205ENST00000479712 FKTNO75072 461 aa7.19□□□□□ -1.26
UPF3A-205ENST00000479712 JMJD7P0C870 316 aa7.19□□□□□ -1.26
UPF3A-205ENST00000479712 HSPA8P11142 646 aaKnown RBP7.19□□□□□ -1.26
UPF3A-205ENST00000479712 POU3F2P20265 443 aaPredicted RBP7.19□□□□□ -1.26
UPF3A-205ENST00000479712 LTBRP36941 435 aa7.19□□□□□ -1.26
UPF3A-205ENST00000479712 GUCY1A3Q02108 690 aa7.19□□□□□ -1.26
UPF3A-205ENST00000479712 KCNAB2Q13303 367 aa7.19□□□□□ -1.26
UPF3A-205ENST00000479712 TESK1Q15569 626 aa7.19□□□□□ -1.26
UPF3A-205ENST00000479712 IFI16Q16666 785 aaKnown RBP7.19□□□□□ -1.26
UPF3A-205ENST00000479712 GAB4Q2WGN9 574 aa7.19□□□□□ -1.26
UPF3A-205ENST00000479712 WWC2Q6AWC2 1192 aa7.19□□□□□ -1.26
UPF3A-205ENST00000479712 RNF111Q6ZNA4 994 aa7.19□□□□□ -1.26
UPF3A-205ENST00000479712 DDX46Q7L014 1031 aaKnown RBP7.19□□□□□ -1.26
UPF3A-205ENST00000479712 DDX42Q86XP3 938 aaKnown RBP eCLIP7.19□□□□□ -1.26
UPF3A-205ENST00000479712 KRTAP1-3Q8IUG1 177 aa7.19□□□□□ -1.26
UPF3A-205ENST00000479712 IFNL3Q8IZI9 196 aa7.19□□□□□ -1.26
UPF3A-205ENST00000479712 AFAP1L2Q8N4X5 818 aa7.19□□□□□ -1.26
UPF3A-205ENST00000479712 STAG1Q8WVM7 1258 aa7.19□□□□□ -1.26
UPF3A-205ENST00000479712 DIO2Q92813 273 aa7.19□□□□□ -1.26
UPF3A-205ENST00000479712 CDADC1Q9BWV3 514 aa7.19□□□□□ -1.26
UPF3A-205ENST00000479712 GPR27Q9NS67 375 aa7.19□□□□□ -1.26
UPF3A-205ENST00000479712 HOMER2Q9NSB8 354 aa7.19□□□□□ -1.26
UPF3A-205ENST00000479712 TYW1Q9NV66 732 aaKnown RBP7.19□□□□□ -1.26
UPF3A-205ENST00000479712 PCDHA9Q9Y5H5 950 aa7.19□□□□□ -1.26
UPF3A-205ENST00000479712 NPFFR2Q9Y5X5 522 aa7.19□□□□□ -1.26
UPF3A-205ENST00000479712 SPATA31A1Q5TZJ5 1347 aa7.19□□□□□ -1.26
UPF3A-205ENST00000479712 B4E1Z4 1266 aa7.18□□□□□ -1.26
UPF3A-205ENST00000479712 CYP26A1O43174 497 aa7.18□□□□□ -1.26
UPF3A-205ENST00000479712 KPNA6O60684 536 aa7.18□□□□□ -1.26
UPF3A-205ENST00000479712 H2AFB1P0C5Y9 115 aa7.18□□□□□ -1.26
UPF3A-205ENST00000479712 H2AFB2P0C5Z0 115 aa7.18□□□□□ -1.26
UPF3A-205ENST00000479712 PAMP19021 973 aa7.18□□□□□ -1.26
UPF3A-205ENST00000479712 ENDOUP21128 410 aaKnown RBP7.18□□□□□ -1.26
UPF3A-205ENST00000479712 SOX10P56693 466 aa7.18□□□□□ -1.26
UPF3A-205ENST00000479712 EVA1CP58658 441 aa7.18□□□□□ -1.26
UPF3A-205ENST00000479712 GPR85P60893 370 aa7.18□□□□□ -1.26
UPF3A-205ENST00000479712 PLEKHG6Q3KR16 790 aa7.18□□□□□ -1.26
Retrieved 100 of 20,778 RNA–protein pairs in 111.3 ms