RNA–Protein interactions for RNA: ENST00000473177.1

LRCH3-214, Transcript of leucine rich repeats and calponin homology domain containing 3, humanhuman

TSL 4

Gene LRCH3, Length 520 nt, Biotype retained intron, Subcellular localisation Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LRCH3-214ENST00000473177 ZDHHC9Q9Y397 364 aa5.66□□□□□ -1.5
LRCH3-214ENST00000473177 CYP46A1Q9Y6A2 500 aa5.66□□□□□ -1.5
LRCH3-214ENST00000473177 V9GYY5 206 aaPredicted RBP5.66□□□□□ -1.5
LRCH3-214ENST00000473177 MEGF11A6BM72 1044 aa5.65□□□□□ -1.5
LRCH3-214ENST00000473177 C9orf172C9J069 976 aa5.65□□□□□ -1.5
LRCH3-214ENST00000473177 KCNQ3O43525 872 aa5.65□□□□□ -1.5
LRCH3-214ENST00000473177 F13A1P00488 732 aa5.65□□□□□ -1.5
LRCH3-214ENST00000473177 CTSBP07858 339 aa5.65□□□□□ -1.5
LRCH3-214ENST00000473177 TFE3P19532 575 aaPredicted RBP5.65□□□□□ -1.5
LRCH3-214ENST00000473177 CHMLP26374 656 aa5.65□□□□□ -1.5
LRCH3-214ENST00000473177 NRG1Q02297 640 aaPredicted RBP5.65□□□□□ -1.5
LRCH3-214ENST00000473177 SP3Q02447 781 aa5.65□□□□□ -1.5
LRCH3-214ENST00000473177 LMNB2Q03252 620 aa5.65□□□□□ -1.5
LRCH3-214ENST00000473177 TPD52L1Q16890 204 aaPredicted RBP5.65□□□□□ -1.5
LRCH3-214ENST00000473177 ZNF394Q53GI3 561 aa5.65□□□□□ -1.5
LRCH3-214ENST00000473177 PRAMEF18Q5VWM3 479 aa5.65□□□□□ -1.5
LRCH3-214ENST00000473177 SUSD4Q5VX71 490 aa5.65□□□□□ -1.5
LRCH3-214ENST00000473177 ACAD11Q709F0 780 aa5.65□□□□□ -1.5
LRCH3-214ENST00000473177 CCDC84Q86UT8 332 aaPredicted RBP5.65□□□□□ -1.5
LRCH3-214ENST00000473177 TRIM42Q8IWZ5 723 aa5.65□□□□□ -1.5
LRCH3-214ENST00000473177 ZGPATQ8N5A5 531 aaKnown RBP5.65□□□□□ -1.5
LRCH3-214ENST00000473177 KIF18AQ8NI77 898 aa5.65□□□□□ -1.5
LRCH3-214ENST00000473177 KCNB2Q92953 911 aa5.65□□□□□ -1.5
LRCH3-214ENST00000473177 RILPL2Q969X0 211 aa5.65□□□□□ -1.5
LRCH3-214ENST00000473177 KIF1BPQ96EK5 621 aa5.65□□□□□ -1.5
LRCH3-214ENST00000473177 TIGD1Q96MW7 591 aa5.65□□□□□ -1.5
LRCH3-214ENST00000473177 EYA3Q99504 573 aa5.65□□□□□ -1.5
LRCH3-214ENST00000473177 TMPRSS13Q9BYE2 586 aa5.65□□□□□ -1.5
LRCH3-214ENST00000473177 NUP62CLQ9H1M0 184 aa5.65□□□□□ -1.5
LRCH3-214ENST00000473177 ALDH8A1Q9H2A2 487 aaPredicted RBP5.65□□□□□ -1.5
LRCH3-214ENST00000473177 TNMDQ9H2S6 317 aa5.65□□□□□ -1.5
LRCH3-214ENST00000473177 ZSCAN16Q9H4T2 348 aaPredicted RBP5.65□□□□□ -1.5
LRCH3-214ENST00000473177 CCDC86Q9H6F5 360 aaKnown RBP5.65□□□□□ -1.5
LRCH3-214ENST00000473177 CWC15Q9P013 229 aaKnown RBP5.65□□□□□ -1.5
LRCH3-214ENST00000473177 IMPACTQ9P2X3 320 aa5.65□□□□□ -1.5
LRCH3-214ENST00000473177 PTCH2Q9Y6C5 1203 aa5.65□□□□□ -1.5
LRCH3-214ENST00000473177 MORC2Q9Y6X9 1032 aaPredicted RBP5.65□□□□□ -1.5
LRCH3-214ENST00000473177 TTC41PQ6P2S7 1318 aa5.65□□□□□ -1.51
LRCH3-214ENST00000473177 MAP3K15Q6ZN16 1313 aa5.65□□□□□ -1.51
LRCH3-214ENST00000473177 UBN2Q6ZU65 1347 aa5.65□□□□□ -1.51
LRCH3-214ENST00000473177 SYNGAP1Q96PV0 1343 aa5.65□□□□□ -1.51
LRCH3-214ENST00000473177 ERVV-1B6SEH8 477 aa5.64□□□□□ -1.51
LRCH3-214ENST00000473177 F6X3S4 739 aa5.64□□□□□ -1.51
LRCH3-214ENST00000473177 F8W735 103 aaPredicted RBP5.64□□□□□ -1.51
LRCH3-214ENST00000473177 MYO1BO43795 1136 aa5.64□□□□□ -1.51
LRCH3-214ENST00000473177 GLRX3O76003 335 aaKnown RBP5.64□□□□□ -1.51
LRCH3-214ENST00000473177 NTSR2O95665 410 aa5.64□□□□□ -1.51
LRCH3-214ENST00000473177 ERCC5P28715 1186 aaPredicted RBP5.64□□□□□ -1.51
LRCH3-214ENST00000473177 RACK1P63244 317 aaKnown RBP5.64□□□□□ -1.51
LRCH3-214ENST00000473177 CBX1P83916 185 aa5.64□□□□□ -1.51
LRCH3-214ENST00000473177 CRHR2Q13324 411 aa5.64□□□□□ -1.51
LRCH3-214ENST00000473177 CAMK2GQ13555 558 aaPredicted RBP5.64□□□□□ -1.51
LRCH3-214ENST00000473177 GRAPQ13588 217 aa5.64□□□□□ -1.51
LRCH3-214ENST00000473177 PTPN14Q15678 1187 aa5.64□□□□□ -1.51
LRCH3-214ENST00000473177 PARP10Q53GL7 1025 aa5.64□□□□□ -1.51
LRCH3-214ENST00000473177 EXOSC6Q5RKV6 272 aaKnown RBP5.64□□□□□ -1.51
LRCH3-214ENST00000473177 CTR9Q6PD62 1173 aa5.64□□□□□ -1.51
LRCH3-214ENST00000473177 ZNF654Q8IZM8 581 aa5.64□□□□□ -1.51
LRCH3-214ENST00000473177 C8orf58Q8NAV2 365 aa5.64□□□□□ -1.51
LRCH3-214ENST00000473177 ZNF397Q8NF99 534 aaPredicted RBP5.64□□□□□ -1.51
LRCH3-214ENST00000473177 IL17REQ8NFR9 667 aa5.64□□□□□ -1.51
LRCH3-214ENST00000473177 GRAPLQ8TC17 118 aaPredicted RBP5.64□□□□□ -1.51
LRCH3-214ENST00000473177 SH3TC2Q8TF17 1288 aa5.64□□□□□ -1.51
LRCH3-214ENST00000473177 GAL3ST3Q96A11 431 aa5.64□□□□□ -1.51
LRCH3-214ENST00000473177 RUSC1Q9BVN2 902 aa5.64□□□□□ -1.51
LRCH3-214ENST00000473177 TRIM5Q9C035 493 aa5.64□□□□□ -1.51
LRCH3-214ENST00000473177 ZC3H12CQ9C0D7 883 aaKnown RBP5.64□□□□□ -1.51
LRCH3-214ENST00000473177 TGIF2Q9GZN2 237 aa5.64□□□□□ -1.51
LRCH3-214ENST00000473177 RNF208Q9H0X6 261 aa5.64□□□□□ -1.51
LRCH3-214ENST00000473177 MIR1-1HGQ9H1L0 117 aa5.64□□□□□ -1.51
LRCH3-214ENST00000473177 SUGCTQ9HAC7 445 aa5.64□□□□□ -1.51
LRCH3-214ENST00000473177 MYOZ2Q9NPC6 264 aa5.64□□□□□ -1.51
LRCH3-214ENST00000473177 KCND1Q9NSA2 647 aa5.64□□□□□ -1.51
LRCH3-214ENST00000473177 HMG20BQ9P0W2 317 aa5.64□□□□□ -1.51
LRCH3-214ENST00000473177 SCAF8Q9UPN6 1271 aaKnown RBP5.64□□□□□ -1.51
LRCH3-214ENST00000473177 PCDHGB7Q9Y5F8 929 aa5.64□□□□□ -1.51
LRCH3-214ENST00000473177 RBBP6Q7Z6E9 1792 aaKnown RBP5.63□□□□□ -1.51
LRCH3-214ENST00000473177 KRBA1A5PL33 1030 aa5.63□□□□□ -1.51
LRCH3-214ENST00000473177 GOLGA6L9A6NEM1 432 aa5.63□□□□□ -1.51
LRCH3-214ENST00000473177 WTIPA6NIX2 430 aaPredicted RBP5.63□□□□□ -1.51
LRCH3-214ENST00000473177 BECN2A8MW95 431 aa5.63□□□□□ -1.51
LRCH3-214ENST00000473177 MINDY4BA8MYZ0 360 aa5.63□□□□□ -1.51
LRCH3-214ENST00000473177 ZNF862O60290 1169 aa5.63□□□□□ -1.51
LRCH3-214ENST00000473177 PF4P02776 101 aa5.63□□□□□ -1.51
LRCH3-214ENST00000473177 PROCP04070 461 aa5.63□□□□□ -1.51
LRCH3-214ENST00000473177 TUBBP07437 444 aa5.63□□□□□ -1.51
LRCH3-214ENST00000473177 HMGB1P09429 215 aaKnown RBP5.63□□□□□ -1.51
LRCH3-214ENST00000473177 UBTFL1P0CB47 393 aaPredicted RBP5.63□□□□□ -1.51
LRCH3-214ENST00000473177 TNNT1P13805 278 aa5.63□□□□□ -1.51
LRCH3-214ENST00000473177 MYL6BP14649 208 aa5.63□□□□□ -1.51
LRCH3-214ENST00000473177 SYT1P21579 422 aa5.63□□□□□ -1.51
LRCH3-214ENST00000473177 GARTP22102 1010 aa5.63□□□□□ -1.51
LRCH3-214ENST00000473177 EIF4A3P38919 411 aaKnown RBP5.63□□□□□ -1.51
LRCH3-214ENST00000473177 KCNJ6P48051 423 aa5.63□□□□□ -1.51
LRCH3-214ENST00000473177 SLC20A2Q08357 652 aa5.63□□□□□ -1.51
LRCH3-214ENST00000473177 ADGRE1Q14246 886 aa5.63□□□□□ -1.51
LRCH3-214ENST00000473177 KIF22Q14807 665 aa5.63□□□□□ -1.51
LRCH3-214ENST00000473177 LARP1BQ659C4 914 aaKnown RBP5.63□□□□□ -1.51
LRCH3-214ENST00000473177 SARM1Q6SZW1 724 aa5.63□□□□□ -1.51
LRCH3-214ENST00000473177 Q6ZS46 218 aa5.63□□□□□ -1.51
Retrieved 100 of 20,778 RNA–protein pairs in 88.2 ms