RNA–Protein interactions for RNA: ENST00000471445.5

SREBF1-210, Transcript of sterol regulatory element binding transcription factor 1, humanhuman

TSL 2

Gene SREBF1, Length 936 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SREBF1-210ENST00000471445 GPR20Q99678 358 aa24.04■■□□□ 1.44
SREBF1-210ENST00000471445 RIC8AQ9NPQ8 531 aa24.04■■□□□ 1.44
SREBF1-210ENST00000471445 PCDHA6Q9UN73 950 aa24.04■■□□□ 1.44
SREBF1-210ENST00000471445 PCDHA8Q9Y5H6 950 aa24.04■■□□□ 1.44
SREBF1-210ENST00000471445 DLL1O00548 723 aa24.03■■□□□ 1.44
SREBF1-210ENST00000471445 ITGB5P18084 799 aa24.03■■□□□ 1.44
SREBF1-210ENST00000471445 CDHR1Q96JP9 859 aa24.03■■□□□ 1.44
SREBF1-210ENST00000471445 UBIAD1Q9Y5Z9 338 aa24.03■■□□□ 1.44
SREBF1-210ENST00000471445 V9GY48 417 aaPredicted RBP24.03■■□□□ 1.44
SREBF1-210ENST00000471445 CDH23Q9H251 3354 aa24.03■■□□□ 1.44
SREBF1-210ENST00000471445 COL6A3P12111 3177 aa24.03■■□□□ 1.44
SREBF1-210ENST00000471445 KAT6AQ92794 2004 aa24.02■■□□□ 1.44
SREBF1-210ENST00000471445 H3BRB1 525 aa24.02■■□□□ 1.44
SREBF1-210ENST00000471445 KCNA2P16389 499 aa24.02■■□□□ 1.44
SREBF1-210ENST00000471445 PSMA5P28066 241 aa24.02■■□□□ 1.44
SREBF1-210ENST00000471445 HOXC8P31273 242 aa24.02■■□□□ 1.44
SREBF1-210ENST00000471445 PTK7Q13308 1070 aa24.02■■□□□ 1.44
SREBF1-210ENST00000471445 HIC1Q14526 733 aa24.02■■□□□ 1.44
SREBF1-210ENST00000471445 RAB30Q15771 203 aa24.02■■□□□ 1.44
SREBF1-210ENST00000471445 LRRC8DQ7L1W4 858 aa24.02■■□□□ 1.44
SREBF1-210ENST00000471445 TUT1Q9H6E5 874 aaKnown RBP24.02■■□□□ 1.44
SREBF1-210ENST00000471445 EHMT1Q9H9B1 1298 aa24.02■■□□□ 1.44
SREBF1-210ENST00000471445 PPP4R2Q9NY27 417 aa24.02■■□□□ 1.44
SREBF1-210ENST00000471445 BARHL2Q9NY43 387 aa24.02■■□□□ 1.44
SREBF1-210ENST00000471445 NAP1L2Q9ULW6 460 aaPredicted RBP24.02■■□□□ 1.44
SREBF1-210ENST00000471445 TELO2Q9Y4R8 837 aa24.02■■□□□ 1.44
SREBF1-210ENST00000471445 CCDC196A0A1B0GTZ2 297 aa24.01■■□□□ 1.43
SREBF1-210ENST00000471445 SELPP16109 830 aa24.01■■□□□ 1.43
SREBF1-210ENST00000471445 ADD1P35611 737 aaKnown RBP24.01■■□□□ 1.43
SREBF1-210ENST00000471445 ADCY7P51828 1080 aa24.01■■□□□ 1.43
SREBF1-210ENST00000471445 TRIM71Q2Q1W2 868 aaKnown RBP24.01■■□□□ 1.43
SREBF1-210ENST00000471445 ERICH6BQ5W0A0 696 aa24.01■■□□□ 1.43
SREBF1-210ENST00000471445 GIMAP8Q8ND71 665 aaPredicted RBP24.01■■□□□ 1.43
SREBF1-210ENST00000471445 MYLIPQ8WY64 445 aa24.01■■□□□ 1.43
SREBF1-210ENST00000471445 WNT8BQ93098 351 aa24.01■■□□□ 1.43
SREBF1-210ENST00000471445 USP26Q9BXU7 913 aa24.01■■□□□ 1.43
SREBF1-210ENST00000471445 ZNF576Q9H609 170 aa24.01■■□□□ 1.43
SREBF1-210ENST00000471445 SLC4A7Q9Y6M7 1214 aa24.01■■□□□ 1.43
SREBF1-210ENST00000471445 ZBBXA8MT70 800 aa24■■□□□ 1.43
SREBF1-210ENST00000471445 CKBP12277 381 aa24■■□□□ 1.43
SREBF1-210ENST00000471445 ACTN1P12814 892 aa24■■□□□ 1.43
SREBF1-210ENST00000471445 ZNF200P98182 395 aaPredicted RBP24■■□□□ 1.43
SREBF1-210ENST00000471445 GPNMBQ14956 572 aa24■■□□□ 1.43
SREBF1-210ENST00000471445 PFKFB3Q16875 520 aaPredicted RBP24■■□□□ 1.43
SREBF1-210ENST00000471445 TRIM50Q86XT4 487 aa24■■□□□ 1.43
SREBF1-210ENST00000471445 ANO3Q9BYT9 981 aa24■■□□□ 1.43
SREBF1-210ENST00000471445 JADE2Q9NQC1 790 aa24■■□□□ 1.43
SREBF1-210ENST00000471445 ATP9AO75110 1047 aa23.99■■□□□ 1.43
SREBF1-210ENST00000471445 PARNO95453 639 aaKnown RBP23.99■■□□□ 1.43
SREBF1-210ENST00000471445 SMIM10L2AP0DMW4 78 aa23.99■■□□□ 1.43
SREBF1-210ENST00000471445 SMIM10L2BP0DMW5 78 aa23.99■■□□□ 1.43
SREBF1-210ENST00000471445 CLK2P49760 499 aaKnown RBP23.99■■□□□ 1.43
SREBF1-210ENST00000471445 AP3B2Q13367 1082 aa23.99■■□□□ 1.43
SREBF1-210ENST00000471445 MTMR1Q13613 665 aa23.99■■□□□ 1.43
SREBF1-210ENST00000471445 GRIN2CQ14957 1233 aa23.99■■□□□ 1.43
SREBF1-210ENST00000471445 TRAF7Q6Q0C0 670 aa23.99■■□□□ 1.43
SREBF1-210ENST00000471445 PGBD1Q96JS3 809 aa23.99■■□□□ 1.43
SREBF1-210ENST00000471445 MSRAQ9UJ68 235 aa23.99■■□□□ 1.43
SREBF1-210ENST00000471445 YBX2Q9Y2T7 364 aaKnown RBP23.99■■□□□ 1.43
SREBF1-210ENST00000471445 SMCO2A6NFE2 343 aa23.98■■□□□ 1.43
SREBF1-210ENST00000471445 FOSP01100 380 aaPredicted RBP23.98■■□□□ 1.43
SREBF1-210ENST00000471445 SCG2P13521 617 aa23.98■■□□□ 1.43
SREBF1-210ENST00000471445 EVCP57679 992 aa23.98■■□□□ 1.43
SREBF1-210ENST00000471445 SP4Q02446 784 aa23.98■■□□□ 1.43
SREBF1-210ENST00000471445 SERINC5Q86VE9 423 aa23.98■■□□□ 1.43
SREBF1-210ENST00000471445 GLT8D2Q9H1C3 349 aa23.98■■□□□ 1.43
SREBF1-210ENST00000471445 ZNF215Q9UL58 517 aaPredicted RBP23.98■■□□□ 1.43
SREBF1-210ENST00000471445 MICAL3Q7RTP6 2002 aa23.98■■□□□ 1.43
SREBF1-210ENST00000471445 ESYT2A0FGR8 921 aa23.97■■□□□ 1.43
SREBF1-210ENST00000471445 C17orf102A2RUQ5 167 aa23.97■■□□□ 1.43
SREBF1-210ENST00000471445 MAFGO15525 162 aa23.97■■□□□ 1.43
SREBF1-210ENST00000471445 BAIAP3O94812 1187 aa23.97■■□□□ 1.43
SREBF1-210ENST00000471445 CXCL10P02778 98 aa23.97■■□□□ 1.43
SREBF1-210ENST00000471445 FOSL2P15408 326 aa23.97■■□□□ 1.43
SREBF1-210ENST00000471445 ATP2A2P16615 1042 aaKnown RBP23.97■■□□□ 1.43
SREBF1-210ENST00000471445 RUFY3Q7L099 469 aa23.97■■□□□ 1.43
SREBF1-210ENST00000471445 SLC9A7Q96T83 725 aa23.97■■□□□ 1.43
SREBF1-210ENST00000471445 FTOQ9C0B1 505 aaKnown RBP eCLIP23.97■■□□□ 1.43
SREBF1-210ENST00000471445 NKX2-4Q9H2Z4 354 aa23.97■■□□□ 1.43
SREBF1-210ENST00000471445 ZSWIM6Q9HCJ5 1215 aa23.97■■□□□ 1.43
SREBF1-210ENST00000471445 MYO9BQ13459 2157 aa23.96■■□□□ 1.43
SREBF1-210ENST00000471445 SIP14410 1827 aa23.96■■□□□ 1.43
SREBF1-210ENST00000471445 NBNO60934 754 aa23.96■■□□□ 1.43
SREBF1-210ENST00000471445 TCF7P36402 384 aaPredicted RBP23.96■■□□□ 1.43
SREBF1-210ENST00000471445 SREBF1P36956 1147 aa23.96■■□□□ 1.43
SREBF1-210ENST00000471445 NTRK3Q16288 839 aa23.96■■□□□ 1.43
SREBF1-210ENST00000471445 PKN1Q16512 942 aa23.96■■□□□ 1.43
SREBF1-210ENST00000471445 UTP14CQ5TAP6 766 aaKnown RBP23.96■■□□□ 1.43
SREBF1-210ENST00000471445 MXRA8Q9BRK3 442 aa23.96■■□□□ 1.43
SREBF1-210ENST00000471445 RNPEPQ9H4A4 650 aa23.96■■□□□ 1.43
SREBF1-210ENST00000471445 TMEM260Q9NX78 707 aa23.96■■□□□ 1.43
SREBF1-210ENST00000471445 PCDHA11Q9Y5I1 949 aa23.96■■□□□ 1.43
SREBF1-210ENST00000471445 PRPF3O43395 683 aaKnown RBP23.95■■□□□ 1.42
SREBF1-210ENST00000471445 RABGGTBP53611 331 aa23.95■■□□□ 1.42
SREBF1-210ENST00000471445 TOB2Q14106 344 aaPredicted RBP23.95■■□□□ 1.42
SREBF1-210ENST00000471445 ZNF618Q5T7W0 954 aa23.95■■□□□ 1.42
SREBF1-210ENST00000471445 ATP6V0A1Q93050 837 aa23.95■■□□□ 1.42
SREBF1-210ENST00000471445 RNF26Q9BY78 433 aaPredicted RBP23.95■■□□□ 1.42
SREBF1-210ENST00000471445 TM6SF1Q9BZW5 370 aa23.95■■□□□ 1.42
SREBF1-210ENST00000471445 PKD2L1Q9P0L9 805 aa23.95■■□□□ 1.42
Retrieved 100 of 20,778 RNA–protein pairs in 25.7 ms