RNA–Protein interactions for RNA: ENST00000448404.5

SF1-211, Transcript of splicing factor 1, humanhuman

TSL 1 (best)

Gene SF1, Length 2,778 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SF1-211ENST00000448404 SPDYE3A6NKU9 549 aa16.43■□□□□ 0.22
SF1-211ENST00000448404 LRRC53A6NM62 1247 aa16.43■□□□□ 0.22
SF1-211ENST00000448404 hCG_1984214I3L0E3 225 aa16.43■□□□□ 0.22
SF1-211ENST00000448404 DDX39AO00148 427 aaKnown RBP16.43■□□□□ 0.22
SF1-211ENST00000448404 POLR3GO15318 223 aaPredicted RBP16.43■□□□□ 0.22
SF1-211ENST00000448404 MSH4O15457 936 aa16.43■□□□□ 0.22
SF1-211ENST00000448404 GYS2P54840 703 aa16.43■□□□□ 0.22
SF1-211ENST00000448404 SPIRE1Q08AE8 756 aa16.43■□□□□ 0.22
SF1-211ENST00000448404 TSR1Q2NL82 804 aaKnown RBP16.43■□□□□ 0.22
SF1-211ENST00000448404 TBC1D10BQ4KMP7 808 aaPredicted RBP16.43■□□□□ 0.22
SF1-211ENST00000448404 MYOCDQ8IZQ8 938 aa16.43■□□□□ 0.22
SF1-211ENST00000448404 ZNF713Q8N859 430 aaPredicted RBP16.43■□□□□ 0.22
SF1-211ENST00000448404 SCFD1Q8WVM8 642 aa16.43■□□□□ 0.22
SF1-211ENST00000448404 GDAP1L1Q96MZ0 367 aa16.43■□□□□ 0.22
SF1-211ENST00000448404 A0A1W2PQC6 194 aa16.42■□□□□ 0.22
SF1-211ENST00000448404 PRPF6O94906 941 aaKnown RBP16.42■□□□□ 0.22
SF1-211ENST00000448404 SPATA31C1P0DKV0 1188 aa16.42■□□□□ 0.22
SF1-211ENST00000448404 ZNF76P36508 570 aa16.42■□□□□ 0.22
SF1-211ENST00000448404 PTPROQ16827 1216 aa16.42■□□□□ 0.22
SF1-211ENST00000448404 STYK1Q6J9G0 422 aa16.42■□□□□ 0.22
SF1-211ENST00000448404 ETNPPLQ8TBG4 499 aa16.42■□□□□ 0.22
SF1-211ENST00000448404 BMP2KQ9NSY1 1161 aaPredicted RBP16.42■□□□□ 0.22
SF1-211ENST00000448404 EHD2Q9NZN4 543 aa16.42■□□□□ 0.22
SF1-211ENST00000448404 CDC23Q9UJX2 597 aa16.42■□□□□ 0.22
SF1-211ENST00000448404 SIK3Q9Y2K2 1263 aa16.42■□□□□ 0.22
SF1-211ENST00000448404 EHHADHQ08426 723 aa16.42■□□□□ 0.22
SF1-211ENST00000448404 KCNMA1Q12791 1236 aa16.42■□□□□ 0.22
SF1-211ENST00000448404 CCDC40Q4G0X9 1142 aa16.42■□□□□ 0.22
SF1-211ENST00000448404 DCAF4Q8WV16 495 aa16.42■□□□□ 0.22
SF1-211ENST00000448404 CNKSR1Q969H4 720 aa16.42■□□□□ 0.22
SF1-211ENST00000448404 BHMT2Q9H2M3 363 aa16.42■□□□□ 0.22
SF1-211ENST00000448404 MAGEF1Q9HAY2 307 aa16.42■□□□□ 0.22
SF1-211ENST00000448404 SPDYE2BA6NHP3 402 aa16.41■□□□□ 0.22
SF1-211ENST00000448404 SPDYE6P0CI01 402 aa16.41■□□□□ 0.22
SF1-211ENST00000448404 MYBP10242 640 aa16.41■□□□□ 0.22
SF1-211ENST00000448404 ACTN1P12814 892 aa16.41■□□□□ 0.22
SF1-211ENST00000448404 DPEP1P16444 411 aa16.41■□□□□ 0.22
SF1-211ENST00000448404 PLA2G4AP47712 749 aa16.41■□□□□ 0.22
SF1-211ENST00000448404 FKBP15Q5T1M5 1219 aa16.41■□□□□ 0.22
SF1-211ENST00000448404 CC2D2BQ6DHV5 1058 aa16.41■□□□□ 0.22
SF1-211ENST00000448404 POTEAQ6S8J7 498 aa16.41■□□□□ 0.22
SF1-211ENST00000448404 GUF1Q8N442 669 aaKnown RBP16.41■□□□□ 0.22
SF1-211ENST00000448404 JAKMIP2Q96AA8 810 aa16.41■□□□□ 0.22
SF1-211ENST00000448404 NAPGQ99747 312 aaPredicted RBP16.41■□□□□ 0.22
SF1-211ENST00000448404 RUSC1Q9BVN2 902 aa16.41■□□□□ 0.22
SF1-211ENST00000448404 PLEKHA4Q9H4M7 779 aa16.41■□□□□ 0.22
SF1-211ENST00000448404 ANKZF1Q9H8Y5 726 aa16.41■□□□□ 0.22
SF1-211ENST00000448404 CXCR5P32302 372 aa16.41■□□□□ 0.22
SF1-211ENST00000448404 EIF4A3P38919 411 aaKnown RBP16.41■□□□□ 0.22
SF1-211ENST00000448404 GFPT1Q06210 699 aaPredicted RBP16.41■□□□□ 0.22
SF1-211ENST00000448404 PPP1R18Q6NYC8 613 aa16.41■□□□□ 0.22
SF1-211ENST00000448404 TMCO3Q6UWJ1 677 aa16.41■□□□□ 0.22
SF1-211ENST00000448404 MAEAQ7L5Y9 396 aa16.41■□□□□ 0.22
SF1-211ENST00000448404 SFR1Q86XK3 245 aa16.41■□□□□ 0.22
SF1-211ENST00000448404 PLCD3Q8N3E9 789 aa16.41■□□□□ 0.22
SF1-211ENST00000448404 REEP2Q9BRK0 252 aa16.41■□□□□ 0.22
SF1-211ENST00000448404 WDR18Q9BV38 432 aa16.41■□□□□ 0.22
SF1-211ENST00000448404 HOMER2Q9NSB8 354 aa16.41■□□□□ 0.22
SF1-211ENST00000448404 ZNF70Q9UC06 446 aaPredicted RBP16.41■□□□□ 0.22
SF1-211ENST00000448404 SALL4Q9UJQ4 1053 aa16.41■□□□□ 0.22
SF1-211ENST00000448404 ASTN2O75129 1339 aaPredicted RBP16.41■□□□□ 0.22
SF1-211ENST00000448404 ARFGEF1Q9Y6D6 1849 aa16.41■□□□□ 0.22
SF1-211ENST00000448404 PVALEFA0A1B0GWK0 134 aa16.4■□□□□ 0.22
SF1-211ENST00000448404 CLIC2O15247 247 aa16.4■□□□□ 0.22
SF1-211ENST00000448404 TRIM14Q14142 442 aa16.4■□□□□ 0.22
SF1-211ENST00000448404 MYO3BQ8WXR4 1341 aa16.4■□□□□ 0.22
SF1-211ENST00000448404 CAPN6Q9Y6Q1 641 aa16.4■□□□□ 0.22
SF1-211ENST00000448404 ZBED6P86452 979 aa16.4■□□□□ 0.22
SF1-211ENST00000448404 DLGAP5Q15398 846 aa16.4■□□□□ 0.22
SF1-211ENST00000448404 SRGAP1Q7Z6B7 1085 aa16.4■□□□□ 0.22
SF1-211ENST00000448404 FLAD1Q8NFF5 587 aa16.4■□□□□ 0.22
SF1-211ENST00000448404 PURBQ96QR8 312 aaKnown RBP16.4■□□□□ 0.22
SF1-211ENST00000448404 MMS19Q96T76 1030 aa16.4■□□□□ 0.22
SF1-211ENST00000448404 PCDHA2Q9Y5H9 948 aa16.4■□□□□ 0.22
SF1-211ENST00000448404 ERICH4A6NGS2 130 aa16.39■□□□□ 0.21
SF1-211ENST00000448404 HOXD13P35453 343 aa16.39■□□□□ 0.21
SF1-211ENST00000448404 SLC12A3P55017 1021 aa16.39■□□□□ 0.21
SF1-211ENST00000448404 GABPB1Q06547 395 aaPredicted RBP16.39■□□□□ 0.21
SF1-211ENST00000448404 PLS1Q14651 629 aa16.39■□□□□ 0.21
SF1-211ENST00000448404 CC2D1AQ6P1N0 951 aaPredicted RBP16.39■□□□□ 0.21
SF1-211ENST00000448404 TPH2Q8IWU9 490 aa16.39■□□□□ 0.21
SF1-211ENST00000448404 CRYGNQ8WXF5 182 aa16.39■□□□□ 0.21
SF1-211ENST00000448404 GOLGA1Q92805 767 aa16.39■□□□□ 0.21
SF1-211ENST00000448404 NCK2O43639 380 aa16.39■□□□□ 0.21
SF1-211ENST00000448404 BUB1O43683 1085 aa16.39■□□□□ 0.21
SF1-211ENST00000448404 ZRANB2O95218 330 aaKnown RBP eCLIP16.39■□□□□ 0.211e-6■■■□□ 14.8
SF1-211ENST00000448404 MOCS3O95396 460 aa16.39■□□□□ 0.21
SF1-211ENST00000448404 TBC1D8O95759 1140 aa16.39■□□□□ 0.21
SF1-211ENST00000448404 TUBB4AP04350 444 aa16.39■□□□□ 0.21
SF1-211ENST00000448404 IRX5P78411 483 aaPredicted RBP16.39■□□□□ 0.21
SF1-211ENST00000448404 PRAMEF18Q5VWM3 479 aa16.39■□□□□ 0.21
SF1-211ENST00000448404 GSPT2Q8IYD1 628 aaKnown RBP16.39■□□□□ 0.21
SF1-211ENST00000448404 KRT222Q8N1A0 295 aa16.39■□□□□ 0.21
SF1-211ENST00000448404 CCDC42Q96M95 316 aa16.39■□□□□ 0.21
SF1-211ENST00000448404 EMILIN3Q9NT22 766 aa16.39■□□□□ 0.21
SF1-211ENST00000448404 WRAP73Q9P2S5 460 aaPredicted RBP16.39■□□□□ 0.21
SF1-211ENST00000448404 RGS17Q9UGC6 210 aaPredicted RBP16.39■□□□□ 0.21
SF1-211ENST00000448404 QSER1Q2KHR3 1735 aa16.39■□□□□ 0.21
SF1-211ENST00000448404 PDE2AO00408 941 aaPredicted RBP16.38■□□□□ 0.21
SF1-211ENST00000448404 CASP4P49662 377 aa16.38■□□□□ 0.21
Retrieved 100 of 20,778 RNA–protein pairs in 41 ms