RNA–Protein interactions for RNA: ENST00000369259.4

CHD1L-203, Transcript of chromodomain helicase DNA binding protein 1 like, humanhuman

TSL 1 (best) BASIC

Gene CHD1L, Length 2,358 nt, Biotype protein coding, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHD1L-203ENST00000369259 SAMD15Q9P1V8 674 aa17.73■□□□□ 0.43
CHD1L-203ENST00000369259 AFF2P51816 1311 aa17.73■□□□□ 0.43
CHD1L-203ENST00000369259 PNPLA7Q6ZV29 1317 aa17.73■□□□□ 0.43
CHD1L-203ENST00000369259 CNTNAP5Q8WYK1 1306 aa17.73■□□□□ 0.43
CHD1L-203ENST00000369259 ADAMTS3O15072 1205 aa17.73■□□□□ 0.43
CHD1L-203ENST00000369259 AP1G2O75843 785 aa17.73■□□□□ 0.43
CHD1L-203ENST00000369259 MMEP08473 750 aa17.73■□□□□ 0.43
CHD1L-203ENST00000369259 CALM1P0DP23 149 aa17.73■□□□□ 0.43
CHD1L-203ENST00000369259 CALM2P0DP24 149 aa17.73■□□□□ 0.43
CHD1L-203ENST00000369259 CALM3P0DP25 149 aa17.73■□□□□ 0.43
CHD1L-203ENST00000369259 ITGA6P23229 1130 aa17.73■□□□□ 0.43
CHD1L-203ENST00000369259 EIF3BP55884 814 aaKnown RBP17.73■□□□□ 0.43
CHD1L-203ENST00000369259 TROAPQ12815 778 aa17.73■□□□□ 0.43
CHD1L-203ENST00000369259 RPS6KA1Q15418 735 aa17.73■□□□□ 0.43
CHD1L-203ENST00000369259 TRIM9Q9C026 710 aa17.73■□□□□ 0.43
CHD1L-203ENST00000369259 CUEDC2Q9H467 287 aa17.73■□□□□ 0.43
CHD1L-203ENST00000369259 MAGEF1Q9HAY2 307 aa17.73■□□□□ 0.43
CHD1L-203ENST00000369259 PNMA2Q9UL42 364 aa17.73■□□□□ 0.43
CHD1L-203ENST00000369259 WDR3Q9UNX4 943 aaKnown RBP eCLIP17.73■□□□□ 0.43
CHD1L-203ENST00000369259 AGAP1Q9UPQ3 857 aa17.73■□□□□ 0.43
CHD1L-203ENST00000369259 SCG2P13521 617 aa17.72■□□□□ 0.43
CHD1L-203ENST00000369259 CHN1P15882 459 aa17.72■□□□□ 0.43
CHD1L-203ENST00000369259 SPATA5Q8NB90 893 aa17.72■□□□□ 0.43
CHD1L-203ENST00000369259 LRRC15Q8TF66 581 aa17.72■□□□□ 0.43
CHD1L-203ENST00000369259 PBKQ96KB5 322 aa17.72■□□□□ 0.43
CHD1L-203ENST00000369259 CALR3Q96L12 384 aaKnown RBP17.72■□□□□ 0.43
CHD1L-203ENST00000369259 CPSF2Q9P2I0 782 aaKnown RBP17.72■□□□□ 0.43
CHD1L-203ENST00000369259 ABCB11O95342 1321 aa17.72■□□□□ 0.43
CHD1L-203ENST00000369259 CYP27B1O15528 508 aa17.72■□□□□ 0.43
CHD1L-203ENST00000369259 PDE8BO95263 885 aa17.72■□□□□ 0.43
CHD1L-203ENST00000369259 SERPING1P05155 500 aa17.72■□□□□ 0.43
CHD1L-203ENST00000369259 KCNJ2P63252 427 aa17.72■□□□□ 0.43
CHD1L-203ENST00000369259 ASIC1P78348 528 aa17.72■□□□□ 0.43
CHD1L-203ENST00000369259 DHX9Q08211 1270 aaKnown RBP17.72■□□□□ 0.43
CHD1L-203ENST00000369259 MKRN4PQ13434 485 aaPredicted RBP17.72■□□□□ 0.43
CHD1L-203ENST00000369259 COBLL1Q53SF7 1204 aa17.72■□□□□ 0.43
CHD1L-203ENST00000369259 CENPPQ6IPU0 288 aa17.72■□□□□ 0.43
CHD1L-203ENST00000369259 ARHGAP27Q6ZUM4 889 aa17.72■□□□□ 0.43
CHD1L-203ENST00000369259 ACTRT1Q8TDG2 376 aa17.72■□□□□ 0.43
CHD1L-203ENST00000369259 YIPF3Q9GZM5 350 aa17.72■□□□□ 0.43
CHD1L-203ENST00000369259 LRRC4CQ9HCJ2 640 aa17.72■□□□□ 0.43
CHD1L-203ENST00000369259 GLI3P10071 1580 aa17.71■□□□□ 0.43
CHD1L-203ENST00000369259 A6NHS1 94 aa17.71■□□□□ 0.43
CHD1L-203ENST00000369259 DAPK3O43293 454 aa17.71■□□□□ 0.43
CHD1L-203ENST00000369259 LUC7L3O95232 432 aaKnown RBP17.71■□□□□ 0.43
CHD1L-203ENST00000369259 ALDH5A1P51649 535 aaPredicted RBP17.71■□□□□ 0.43
CHD1L-203ENST00000369259 IFI16Q16666 785 aaKnown RBP17.71■□□□□ 0.43
CHD1L-203ENST00000369259 SFMBT2Q5VUG0 894 aa17.71■□□□□ 0.43
CHD1L-203ENST00000369259 LRRC34Q8IZ02 419 aa17.71■□□□□ 0.43
CHD1L-203ENST00000369259 SRBD1Q8N5C6 995 aaKnown RBP17.71■□□□□ 0.43
CHD1L-203ENST00000369259 SYN2Q92777 582 aaPredicted RBP17.71■□□□□ 0.43
CHD1L-203ENST00000369259 C7orf25Q9BPX7 421 aa17.71■□□□□ 0.43
CHD1L-203ENST00000369259 ELAC2Q9BQ52 826 aaKnown RBP17.71■□□□□ 0.43
CHD1L-203ENST00000369259 NUCKS1Q9H1E3 243 aaKnown RBP17.71■□□□□ 0.43
CHD1L-203ENST00000369259 MINDY4BA8MYZ0 360 aa17.71■□□□□ 0.42
CHD1L-203ENST00000369259 AHCYL1O43865 530 aa17.71■□□□□ 0.42
CHD1L-203ENST00000369259 CEP104O60308 925 aa17.71■□□□□ 0.42
CHD1L-203ENST00000369259 FESP07332 822 aa17.71■□□□□ 0.42
CHD1L-203ENST00000369259 LINGO3P0C6S8 592 aa17.71■□□□□ 0.42
CHD1L-203ENST00000369259 KIAA0753Q2KHM9 967 aa17.71■□□□□ 0.42
CHD1L-203ENST00000369259 THEMIS2Q5TEJ8 643 aa17.71■□□□□ 0.42
CHD1L-203ENST00000369259 CHADLQ6NUI6 762 aa17.71■□□□□ 0.42
CHD1L-203ENST00000369259 CNNM4Q6P4Q7 775 aa17.71■□□□□ 0.42
CHD1L-203ENST00000369259 PROCA1Q8NCQ7 364 aaPredicted RBP17.71■□□□□ 0.42
CHD1L-203ENST00000369259 ATXN2LQ8WWM7 1075 aaKnown RBP17.71■□□□□ 0.42
CHD1L-203ENST00000369259 ANKS1AQ92625 1134 aa17.71■□□□□ 0.42
CHD1L-203ENST00000369259 MOV10L1Q9BXT6 1211 aaKnown RBP17.71■□□□□ 0.42
CHD1L-203ENST00000369259 BSDC1Q9NW68 430 aaPredicted RBP17.71■□□□□ 0.42
CHD1L-203ENST00000369259 CAND2O75155 1236 aa17.7■□□□□ 0.42
CHD1L-203ENST00000369259 DDAH1O94760 285 aa17.7■□□□□ 0.42
CHD1L-203ENST00000369259 NCALDP61601 193 aa17.7■□□□□ 0.42
CHD1L-203ENST00000369259 SF3A3Q12874 501 aaKnown RBP eCLIP17.7■□□□□ 0.421e-23■■■■□ 23.4
CHD1L-203ENST00000369259 TRAF1Q13077 416 aa17.7■□□□□ 0.42
CHD1L-203ENST00000369259 LMOD2Q6P5Q4 547 aa17.7■□□□□ 0.42
CHD1L-203ENST00000369259 HOOK3Q86VS8 718 aa17.7■□□□□ 0.42
CHD1L-203ENST00000369259 KIAA0895Q8NCT3 520 aa17.7■□□□□ 0.42
CHD1L-203ENST00000369259 AP1M1Q9BXS5 423 aa17.7■□□□□ 0.42
CHD1L-203ENST00000369259 TLR2O60603 784 aa17.69■□□□□ 0.42
CHD1L-203ENST00000369259 KIF4AO95239 1232 aa17.69■□□□□ 0.42
CHD1L-203ENST00000369259 FGFR1OPO95684 399 aaKnown RBP17.69■□□□□ 0.42
CHD1L-203ENST00000369259 RARAP10276 462 aa17.69■□□□□ 0.42
CHD1L-203ENST00000369259 PLCG1P19174 1290 aa17.69■□□□□ 0.42
CHD1L-203ENST00000369259 PRPHP41219 470 aa17.69■□□□□ 0.42
CHD1L-203ENST00000369259 SLC18A3Q16572 532 aa17.69■□□□□ 0.42
CHD1L-203ENST00000369259 TBC1D5Q92609 795 aa17.69■□□□□ 0.42
CHD1L-203ENST00000369259 DDX47Q9H0S4 455 aaKnown RBP17.69■□□□□ 0.42
CHD1L-203ENST00000369259 TMEM60Q9H2L4 133 aa17.69■□□□□ 0.42
CHD1L-203ENST00000369259 NLRC4Q9NPP4 1024 aa17.69■□□□□ 0.42
CHD1L-203ENST00000369259 ABCF3Q9NUQ8 709 aa17.69■□□□□ 0.42
CHD1L-203ENST00000369259 GOLGA6L10A0A0M3HER8 536 aa17.69■□□□□ 0.42
CHD1L-203ENST00000369259 CCDC188H7C350 402 aa17.69■□□□□ 0.42
CHD1L-203ENST00000369259 PGRMC1O00264 195 aaKnown RBP17.69■□□□□ 0.42
CHD1L-203ENST00000369259 CALML3P27482 149 aa17.69■□□□□ 0.42
CHD1L-203ENST00000369259 MMP13P45452 471 aa17.69■□□□□ 0.42
CHD1L-203ENST00000369259 USP11P51784 963 aa17.69■□□□□ 0.42
CHD1L-203ENST00000369259 TRIM28Q13263 835 aaKnown RBP17.69■□□□□ 0.42
CHD1L-203ENST00000369259 PFKFB3Q16875 520 aaPredicted RBP17.69■□□□□ 0.42
CHD1L-203ENST00000369259 SPDYCQ5MJ68 293 aa17.69■□□□□ 0.42
CHD1L-203ENST00000369259 BLIDQ8IZY5 108 aa17.69■□□□□ 0.42
CHD1L-203ENST00000369259 ZBTB38Q8NAP3 1195 aaPredicted RBP17.69■□□□□ 0.42
Retrieved 100 of 20,778 RNA–protein pairs in 66.6 ms