RNA–Protein interactions for RNA: ENST00000321805.11

UBE2D3-201, Transcript of ubiquitin conjugating enzyme E2 D3, humanhuman

APPRIS ALT1 TSL 5 BASIC

Gene UBE2D3, Length 1,087 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBE2D3-201ENST00000321805 UBIAD1Q9Y5Z9 338 aa24.42■■□□□ 1.5
UBE2D3-201ENST00000321805 H3BRB1 525 aa24.41■■□□□ 1.5
UBE2D3-201ENST00000321805 ADD1P35611 737 aaKnown RBP24.41■■□□□ 1.5
UBE2D3-201ENST00000321805 PTK7Q13308 1070 aa24.41■■□□□ 1.5
UBE2D3-201ENST00000321805 AP3B2Q13367 1082 aa24.41■■□□□ 1.5
UBE2D3-201ENST00000321805 PFKFB3Q16875 520 aaPredicted RBP24.41■■□□□ 1.5
UBE2D3-201ENST00000321805 RUFY3Q7L099 469 aa24.41■■□□□ 1.5
UBE2D3-201ENST00000321805 VWCEQ96DN2 955 aa24.41■■□□□ 1.5
UBE2D3-201ENST00000321805 GPR20Q99678 358 aa24.41■■□□□ 1.5
UBE2D3-201ENST00000321805 TM6SF1Q9BZW5 370 aa24.41■■□□□ 1.5
UBE2D3-201ENST00000321805 SEMA6BQ9H3T3 888 aa24.41■■□□□ 1.5
UBE2D3-201ENST00000321805 TUT1Q9H6E5 874 aaKnown RBP24.41■■□□□ 1.5
UBE2D3-201ENST00000321805 ZSWIM6Q9HCJ5 1215 aa24.41■■□□□ 1.5
UBE2D3-201ENST00000321805 TRIP12Q14669 1992 aaPredicted RBP24.4■■□□□ 1.5
UBE2D3-201ENST00000321805 SORBS3O60504 671 aa24.4■■□□□ 1.5
UBE2D3-201ENST00000321805 ACTN1P12814 892 aa24.4■■□□□ 1.5
UBE2D3-201ENST00000321805 ITGB5P18084 799 aa24.4■■□□□ 1.5
UBE2D3-201ENST00000321805 MTMR1Q13613 665 aa24.4■■□□□ 1.5
UBE2D3-201ENST00000321805 OTOP2Q7RTS6 562 aa24.4■■□□□ 1.5
UBE2D3-201ENST00000321805 CCDC12Q8WUD4 166 aaPredicted RBP24.4■■□□□ 1.5
UBE2D3-201ENST00000321805 JADE2Q9NQC1 790 aa24.4■■□□□ 1.5
UBE2D3-201ENST00000321805 ZNF215Q9UL58 517 aaPredicted RBP24.4■■□□□ 1.5
UBE2D3-201ENST00000321805 DOCK5Q9H7D0 1870 aa24.4■■□□□ 1.5
UBE2D3-201ENST00000321805 SCN5AQ14524 2016 aa24.4■■□□□ 1.5
UBE2D3-201ENST00000321805 ESYT2A0FGR8 921 aa24.39■■□□□ 1.49
UBE2D3-201ENST00000321805 SMCO2A6NFE2 343 aa24.39■■□□□ 1.49
UBE2D3-201ENST00000321805 SCG2P13521 617 aa24.39■■□□□ 1.49
UBE2D3-201ENST00000321805 SELPP16109 830 aa24.39■■□□□ 1.49
UBE2D3-201ENST00000321805 KCNA2P16389 499 aa24.39■■□□□ 1.49
UBE2D3-201ENST00000321805 HOXC8P31273 242 aa24.39■■□□□ 1.49
UBE2D3-201ENST00000321805 RAB30Q15771 203 aa24.39■■□□□ 1.49
UBE2D3-201ENST00000321805 TTYH1Q9H313 450 aaPredicted RBP24.39■■□□□ 1.49
UBE2D3-201ENST00000321805 CXXC1Q9P0U4 656 aaPredicted RBP24.39■■□□□ 1.49
UBE2D3-201ENST00000321805 PRPF3O43395 683 aaKnown RBP24.38■■□□□ 1.49
UBE2D3-201ENST00000321805 MCTP2Q6DN12 878 aa24.38■■□□□ 1.49
UBE2D3-201ENST00000321805 LRRC8DQ7L1W4 858 aa24.38■■□□□ 1.49
UBE2D3-201ENST00000321805 DHX38Q92620 1227 aaKnown RBP24.38■■□□□ 1.49
UBE2D3-201ENST00000321805 TIFAQ96CG3 184 aa24.38■■□□□ 1.49
UBE2D3-201ENST00000321805 FAM161BQ96MY7 647 aa24.38■■□□□ 1.49
UBE2D3-201ENST00000321805 RNF26Q9BY78 433 aaPredicted RBP24.38■■□□□ 1.49
UBE2D3-201ENST00000321805 ANO3Q9BYT9 981 aa24.38■■□□□ 1.49
UBE2D3-201ENST00000321805 PBX4Q9BYU1 374 aa24.38■■□□□ 1.49
UBE2D3-201ENST00000321805 BCAS3Q9H6U6 928 aa24.38■■□□□ 1.49
UBE2D3-201ENST00000321805 CYP46A1Q9Y6A2 500 aa24.38■■□□□ 1.49
UBE2D3-201ENST00000321805 SLC4A7Q9Y6M7 1214 aa24.38■■□□□ 1.49
UBE2D3-201ENST00000321805 CLK2P49760 499 aaKnown RBP24.37■■□□□ 1.49
UBE2D3-201ENST00000321805 DEFB128Q7Z7B8 93 aa24.37■■□□□ 1.49
UBE2D3-201ENST00000321805 BAIAP3O94812 1187 aa24.36■■□□□ 1.49
UBE2D3-201ENST00000321805 CKBP12277 381 aa24.36■■□□□ 1.49
UBE2D3-201ENST00000321805 SREBF1P36956 1147 aa24.36■■□□□ 1.49
UBE2D3-201ENST00000321805 AKAP17AQ02040 695 aaKnown RBP24.36■■□□□ 1.49
UBE2D3-201ENST00000321805 SERINC5Q86VE9 423 aa24.36■■□□□ 1.49
UBE2D3-201ENST00000321805 CDX2Q99626 313 aaPredicted RBP24.36■■□□□ 1.49
UBE2D3-201ENST00000321805 MXRA8Q9BRK3 442 aa24.36■■□□□ 1.49
UBE2D3-201ENST00000321805 ZMYND12Q9H0C1 365 aa24.36■■□□□ 1.49
UBE2D3-201ENST00000321805 MSRAQ9UJ68 235 aa24.36■■□□□ 1.49
UBE2D3-201ENST00000321805 C17orf102A2RUQ5 167 aa24.35■■□□□ 1.49
UBE2D3-201ENST00000321805 EIF5BO60841 1220 aaKnown RBP24.35■■□□□ 1.49
UBE2D3-201ENST00000321805 ATP9AO75110 1047 aa24.35■■□□□ 1.49
UBE2D3-201ENST00000321805 GNAT1P11488 350 aa24.35■■□□□ 1.49
UBE2D3-201ENST00000321805 IFNAR1P17181 557 aa24.35■■□□□ 1.49
UBE2D3-201ENST00000321805 PDIA3P30101 505 aaKnown RBP24.35■■□□□ 1.49
UBE2D3-201ENST00000321805 NTRK3Q16288 839 aa24.35■■□□□ 1.49
UBE2D3-201ENST00000321805 TRIM71Q2Q1W2 868 aaKnown RBP24.35■■□□□ 1.49
UBE2D3-201ENST00000321805 CDH23Q9H251 3354 aa24.34■■□□□ 1.49
UBE2D3-201ENST00000321805 TET1Q8NFU7 2136 aa24.34■■□□□ 1.49
UBE2D3-201ENST00000321805 ZBBXA8MT70 800 aa24.34■■□□□ 1.49
UBE2D3-201ENST00000321805 CAND2O75155 1236 aa24.34■■□□□ 1.49
UBE2D3-201ENST00000321805 SMIM10L2AP0DMW4 78 aa24.34■■□□□ 1.49
UBE2D3-201ENST00000321805 SMIM10L2BP0DMW5 78 aa24.34■■□□□ 1.49
UBE2D3-201ENST00000321805 GNA11P29992 359 aa24.34■■□□□ 1.49
UBE2D3-201ENST00000321805 TCF7P36402 384 aaPredicted RBP24.34■■□□□ 1.49
UBE2D3-201ENST00000321805 TOB2Q14106 344 aaPredicted RBP24.34■■□□□ 1.49
UBE2D3-201ENST00000321805 PKN1Q16512 942 aa24.34■■□□□ 1.49
UBE2D3-201ENST00000321805 CEP55Q53EZ4 464 aa24.34■■□□□ 1.49
UBE2D3-201ENST00000321805 CCDC148Q8NFR7 591 aa24.34■■□□□ 1.49
UBE2D3-201ENST00000321805 PHOSPHO2Q8TCD6 241 aa24.34■■□□□ 1.49
UBE2D3-201ENST00000321805 SEPT1Q8WYJ6 367 aa24.34■■□□□ 1.49
UBE2D3-201ENST00000321805 SLC9A7Q96T83 725 aa24.34■■□□□ 1.49
UBE2D3-201ENST00000321805 FTOQ9C0B1 505 aaKnown RBP eCLIP24.34■■□□□ 1.498e-9■□□□□ 8.1
UBE2D3-201ENST00000321805 ZNF576Q9H609 170 aa24.34■■□□□ 1.49
UBE2D3-201ENST00000321805 C6orf50Q9HD87 102 aa24.34■■□□□ 1.49
UBE2D3-201ENST00000321805 KCNH7Q9NS40 1196 aa24.34■■□□□ 1.49
UBE2D3-201ENST00000321805 GBF1Q92538 1859 aa24.33■■□□□ 1.49
UBE2D3-201ENST00000321805 GRXCR1A8MXD5 290 aa24.33■■□□□ 1.49
UBE2D3-201ENST00000321805 CXCL10P02778 98 aa24.33■■□□□ 1.49
UBE2D3-201ENST00000321805 NIPA1Q7RTP0 329 aa24.33■■□□□ 1.49
UBE2D3-201ENST00000321805 ATP6V0A1Q93050 837 aa24.33■■□□□ 1.49
UBE2D3-201ENST00000321805 ZNF274Q96GC6 653 aaPredicted RBP24.33■■□□□ 1.49
UBE2D3-201ENST00000321805 NFASCO94856 1347 aa24.33■■□□□ 1.48
UBE2D3-201ENST00000321805 ATP2A2P16615 1042 aaKnown RBP24.32■■□□□ 1.48
UBE2D3-201ENST00000321805 PBX2P40425 430 aa24.32■■□□□ 1.48
UBE2D3-201ENST00000321805 SP4Q02446 784 aa24.32■■□□□ 1.48
UBE2D3-201ENST00000321805 TRIM50Q86XT4 487 aa24.32■■□□□ 1.48
UBE2D3-201ENST00000321805 REXO1Q8N1G1 1221 aaKnown RBP24.32■■□□□ 1.48
UBE2D3-201ENST00000321805 BICD2Q8TD16 824 aa24.32■■□□□ 1.48
UBE2D3-201ENST00000321805 RNPEPQ9H4A4 650 aa24.32■■□□□ 1.48
UBE2D3-201ENST00000321805 JPH1Q9HDC5 661 aaPredicted RBP24.32■■□□□ 1.48
UBE2D3-201ENST00000321805 PCDHA11Q9Y5I1 949 aa24.32■■□□□ 1.48
UBE2D3-201ENST00000321805 EMSYQ7Z589 1322 aa24.32■■□□□ 1.48
Retrieved 100 of 20,778 RNA–protein pairs in 22.6 ms