RNA–Protein interactions for RNA: ENST00000262215.7

ARFGEF1-201, Transcript of ADP ribosylation factor guanine nucleotide exchange factor 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene ARFGEF1, Length 7,225 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ARFGEF1-201ENST00000262215 AFPP02771 609 aaKnown RBP13.44□□□□□ -0.26
ARFGEF1-201ENST00000262215 ELAC2Q9BQ52 826 aaKnown RBP13.44□□□□□ -0.26
ARFGEF1-201ENST00000262215 SUPT3HO75486 399 aa13.44□□□□□ -0.26
ARFGEF1-201ENST00000262215 HSPA4LO95757 839 aa13.44□□□□□ -0.26
ARFGEF1-201ENST00000262215 MARK3P27448 753 aa13.44□□□□□ -0.26
ARFGEF1-201ENST00000262215 ETF1P62495 437 aaKnown RBP13.44□□□□□ -0.26
ARFGEF1-201ENST00000262215 FRA10AC1Q70Z53 315 aa13.44□□□□□ -0.26
ARFGEF1-201ENST00000262215 METTL23Q86XA0 190 aa13.44□□□□□ -0.26
ARFGEF1-201ENST00000262215 B4GALNT2Q8NHY0 566 aa13.44□□□□□ -0.26
ARFGEF1-201ENST00000262215 LBHD1Q9BQE6 289 aaPredicted RBP13.44□□□□□ -0.26
ARFGEF1-201ENST00000262215 DDX28Q9NUL7 540 aaKnown RBP13.44□□□□□ -0.26
ARFGEF1-201ENST00000262215 ZNF711Q9Y462 761 aa13.44□□□□□ -0.26
ARFGEF1-201ENST00000262215 HMGB1P1B2RPK0 211 aaPredicted RBP13.43□□□□□ -0.26
ARFGEF1-201ENST00000262215 CDC25AP30304 524 aa13.43□□□□□ -0.26
ARFGEF1-201ENST00000262215 ARHGAP27Q6ZUM4 889 aa13.43□□□□□ -0.26
ARFGEF1-201ENST00000262215 KCTD17Q8N5Z5 321 aa13.43□□□□□ -0.26
ARFGEF1-201ENST00000262215 EDEM3Q9BZQ6 932 aa13.43□□□□□ -0.26
ARFGEF1-201ENST00000262215 HAUS4Q9H6D7 363 aa13.43□□□□□ -0.26
ARFGEF1-201ENST00000262215 SPTLC3Q9NUV7 552 aa13.43□□□□□ -0.26
ARFGEF1-201ENST00000262215 GOLGA8IPA6NC78 632 aa13.43□□□□□ -0.26
ARFGEF1-201ENST00000262215 GOLGA8JA6NMD2 632 aa13.43□□□□□ -0.26
ARFGEF1-201ENST00000262215 SKIP12755 728 aa13.43□□□□□ -0.26
ARFGEF1-201ENST00000262215 PTH1RQ03431 593 aa13.43□□□□□ -0.26
ARFGEF1-201ENST00000262215 TJAP1Q5JTD0 557 aa13.43□□□□□ -0.26
ARFGEF1-201ENST00000262215 SLFN12Q8IYM2 578 aa13.43□□□□□ -0.26
ARFGEF1-201ENST00000262215 TTC1Q99614 292 aa13.43□□□□□ -0.26
ARFGEF1-201ENST00000262215 GTSE1Q9NYZ3 720 aa13.43□□□□□ -0.26
ARFGEF1-201ENST00000262215 SLC16A2P36021 539 aa13.43□□□□□ -0.26
ARFGEF1-201ENST00000262215 MECOMQ03112 1051 aa13.43□□□□□ -0.26
ARFGEF1-201ENST00000262215 LBRQ14739 615 aaKnown RBP13.43□□□□□ -0.26
ARFGEF1-201ENST00000262215 ZNF467Q7Z7K2 595 aaPredicted RBP13.43□□□□□ -0.26
ARFGEF1-201ENST00000262215 HEXIM2Q96MH2 286 aaKnown RBP13.43□□□□□ -0.26
ARFGEF1-201ENST00000262215 TSC22D3Q99576 134 aa13.43□□□□□ -0.26
ARFGEF1-201ENST00000262215 NRBP2Q9NSY0 501 aa13.43□□□□□ -0.26
ARFGEF1-201ENST00000262215 KIF17Q9P2E2 1029 aa13.43□□□□□ -0.26
ARFGEF1-201ENST00000262215 DDIT3P35638 169 aa13.43□□□□□ -0.26
ARFGEF1-201ENST00000262215 TDRD7Q8NHU6 1098 aaKnown RBP13.43□□□□□ -0.26
ARFGEF1-201ENST00000262215 RBM46Q8TBY0 533 aaKnown RBP13.43□□□□□ -0.26
ARFGEF1-201ENST00000262215 TBRG4Q969Z0 631 aaKnown RBP eCLIP13.43□□□□□ -0.26
ARFGEF1-201ENST00000262215 LRRC4Q9HBW1 653 aa13.43□□□□□ -0.26
ARFGEF1-201ENST00000262215 PPARGC1AQ9UBK2 798 aaKnown RBP13.43□□□□□ -0.26
ARFGEF1-201ENST00000262215 MRPL11Q9Y3B7 192 aaKnown RBP13.43□□□□□ -0.26
ARFGEF1-201ENST00000262215 CA4P22748 312 aa13.43□□□□□ -0.26
ARFGEF1-201ENST00000262215 OCA2Q04671 838 aa13.43□□□□□ -0.26
ARFGEF1-201ENST00000262215 FAM47EQ6ZV65 393 aa13.43□□□□□ -0.26
ARFGEF1-201ENST00000262215 GIPC2Q8TF65 315 aa13.43□□□□□ -0.26
ARFGEF1-201ENST00000262215 UPF3AQ9H1J1 476 aaKnown RBP13.43□□□□□ -0.26
ARFGEF1-201ENST00000262215 PCYT1AP49585 367 aa13.43□□□□□ -0.26
ARFGEF1-201ENST00000262215 PPP1R36Q96LQ0 422 aa13.43□□□□□ -0.26
ARFGEF1-201ENST00000262215 ATG3Q9NT62 314 aa13.43□□□□□ -0.26
ARFGEF1-201ENST00000262215 ANGPTL2Q9UKU9 493 aa13.43□□□□□ -0.26
ARFGEF1-201ENST00000262215 CDV3Q9UKY7 258 aaKnown RBP13.43□□□□□ -0.26
ARFGEF1-201ENST00000262215 PCDHA7Q9UN72 937 aa13.43□□□□□ -0.26
ARFGEF1-201ENST00000262215 PCDH11XQ9BZA7 1347 aa13.43□□□□□ -0.26
ARFGEF1-201ENST00000262215 PCDH11YQ9BZA8 1340 aa13.43□□□□□ -0.26
ARFGEF1-201ENST00000262215 SEC24DO94855 1032 aaPredicted RBP13.42□□□□□ -0.26
ARFGEF1-201ENST00000262215 RNF207Q6ZRF8 634 aa13.42□□□□□ -0.26
ARFGEF1-201ENST00000262215 SLC12A6Q9UHW9 1150 aa13.42□□□□□ -0.26
ARFGEF1-201ENST00000262215 HSPA6P17066 643 aa13.42□□□□□ -0.26
ARFGEF1-201ENST00000262215 NUGGCQ68CJ6 796 aa13.42□□□□□ -0.26
ARFGEF1-201ENST00000262215 DNAJC24Q6P3W2 148 aa13.42□□□□□ -0.26
ARFGEF1-201ENST00000262215 ST13P4Q8IZP2 240 aaPredicted RBP13.42□□□□□ -0.26
ARFGEF1-201ENST00000262215 AGR3Q8TD06 166 aa13.42□□□□□ -0.26
ARFGEF1-201ENST00000262215 MIS12Q9H081 205 aa13.42□□□□□ -0.26
ARFGEF1-201ENST00000262215 ERBB4Q15303 1308 aa13.42□□□□□ -0.26
ARFGEF1-201ENST00000262215 NSD2O96028 1365 aa13.42□□□□□ -0.26
ARFGEF1-201ENST00000262215 DDAH1O94760 285 aa13.42□□□□□ -0.26
ARFGEF1-201ENST00000262215 CCDC159P0C7I6 412 aa13.42□□□□□ -0.26
ARFGEF1-201ENST00000262215 AS3MTQ9HBK9 375 aa13.42□□□□□ -0.26
ARFGEF1-201ENST00000262215 KMT5AQ9NQR1 393 aa13.42□□□□□ -0.26
ARFGEF1-201ENST00000262215 L3MBTL1Q9Y468 752 aa13.42□□□□□ -0.26
ARFGEF1-201ENST00000262215 SOWAHDA6NJG2 315 aa13.42□□□□□ -0.26
ARFGEF1-201ENST00000262215 BRD1O95696 1058 aa13.42□□□□□ -0.26
ARFGEF1-201ENST00000262215 CHEK2O96017 543 aa13.42□□□□□ -0.26
ARFGEF1-201ENST00000262215 GCP02774 474 aa13.42□□□□□ -0.26
ARFGEF1-201ENST00000262215 ZNF394Q53GI3 561 aa13.42□□□□□ -0.26
ARFGEF1-201ENST00000262215 SMAD5Q99717 465 aaKnown RBP13.42□□□□□ -0.26
ARFGEF1-201ENST00000262215 ICA1Q05084 483 aa13.42□□□□□ -0.26
ARFGEF1-201ENST00000262215 CENPKQ9BS16 269 aa13.42□□□□□ -0.26
ARFGEF1-201ENST00000262215 SPZ1Q9BXG8 430 aa13.42□□□□□ -0.26
ARFGEF1-201ENST00000262215 TNKSO95271 1327 aa13.42□□□□□ -0.26
ARFGEF1-201ENST00000262215 TMEM247A6NEH6 219 aa13.41□□□□□ -0.26
ARFGEF1-201ENST00000262215 ARHGEF9O43307 516 aa13.41□□□□□ -0.26
ARFGEF1-201ENST00000262215 SOX11P35716 441 aa13.41□□□□□ -0.26
ARFGEF1-201ENST00000262215 SNAP25P60880 206 aa13.41□□□□□ -0.26
ARFGEF1-201ENST00000262215 PTK2BQ14289 1009 aa13.41□□□□□ -0.26
ARFGEF1-201ENST00000262215 MXD4Q14582 209 aaPredicted RBP13.41□□□□□ -0.26
ARFGEF1-201ENST00000262215 FANCBQ8NB91 859 aa13.41□□□□□ -0.26
ARFGEF1-201ENST00000262215 ZNF577Q9BSK1 485 aa13.41□□□□□ -0.26
ARFGEF1-201ENST00000262215 C14orf93Q9H972 538 aaKnown RBP13.41□□□□□ -0.26
ARFGEF1-201ENST00000262215 PCDHA1Q9Y5I3 950 aa13.41□□□□□ -0.26
ARFGEF1-201ENST00000262215 CDK13Q14004 1512 aaKnown RBP13.41□□□□□ -0.26
ARFGEF1-201ENST00000262215 PRPSAP2O60256 369 aa13.41□□□□□ -0.26
ARFGEF1-201ENST00000262215 VCAM1P19320 739 aa13.41□□□□□ -0.26
ARFGEF1-201ENST00000262215 LMNB2Q03252 620 aa13.41□□□□□ -0.26
ARFGEF1-201ENST00000262215 PPP6R3Q5H9R7 873 aaPredicted RBP13.41□□□□□ -0.26
ARFGEF1-201ENST00000262215 SPATA1Q5VX52 437 aa13.41□□□□□ -0.26
ARFGEF1-201ENST00000262215 IFNL3Q8IZI9 196 aa13.41□□□□□ -0.26
ARFGEF1-201ENST00000262215 PYROXD1Q8WU10 500 aa13.41□□□□□ -0.26
ARFGEF1-201ENST00000262215 NAF1Q96HR8 494 aaKnown RBP13.41□□□□□ -0.26
Retrieved 100 of 20,778 RNA–protein pairs in 144.9 ms