RNA–Protein interactions for RNA: snR53

snR53, Transcript of C/D box small nucleolar RNA (snoRNA), yeastyeast

Gene snR53, Length 91 nt, Biotype snoRNA.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
snR53snR53 TOP1P04786 769 aa-1.4□□□□□ -2.63
snR53snR53 KAR1P11927 433 aa-1.4□□□□□ -2.63
snR53snR53 TIP1P27654 210 aaPredicted RBP-1.4□□□□□ -2.63
snR53snR53 ITR1P30605 584 aa-1.4□□□□□ -2.63
snR53snR53 MRE11P32829 692 aa-1.4□□□□□ -2.63
snR53snR53 BNA4P38169 460 aa-1.4□□□□□ -2.63
snR53snR53 ECM34P38728 170 aa-1.4□□□□□ -2.63
snR53snR53 HUA1P40325 198 aa-1.4□□□□□ -2.63
snR53snR53 RPL37AP49166 88 aaKnown RBP-1.4□□□□□ -2.63
snR53snR53 TOF2Q02208 771 aa-1.4□□□□□ -2.63
snR53snR53 DPB4Q04603 196 aaKnown RBP-1.4□□□□□ -2.63
snR53snR53 ERG27Q12452 347 aaKnown RBP-1.4□□□□□ -2.63
snR53snR53 YHR086W-AQ3E746 53 aa-1.4□□□□□ -2.63
snR53snR53 PEP4P07267 405 aaKnown RBP-1.41□□□□□ -2.64
snR53snR53 CDC24P11433 854 aaPredicted RBP-1.41□□□□□ -2.64
snR53snR53 BOS1P25385 244 aa-1.41□□□□□ -2.64
snR53snR53 TCM62P38228 572 aaKnown RBP-1.41□□□□□ -2.64
snR53snR53 ICS2P38284 255 aa-1.41□□□□□ -2.64
snR53snR53 YNR061CP53747 219 aa-1.41□□□□□ -2.64
snR53snR53 TGL2P54857 326 aa-1.41□□□□□ -2.64
snR53snR53 YPL113CQ02961 396 aa-1.41□□□□□ -2.64
snR53snR53 YMR155WQ03795 547 aa-1.41□□□□□ -2.64
snR53snR53 DDC1Q08949 612 aa-1.41□□□□□ -2.64
snR53snR53 NAG1Q8TGN9 163 aa-1.41□□□□□ -2.64
snR53snR53 YOL085CQ99345 113 aa-1.41□□□□□ -2.64
snR53snR53 YBR085C-AO43137 85 aa-1.42□□□□□ -2.64
snR53snR53 POL4P25615 582 aa-1.42□□□□□ -2.64
snR53snR53 SYN8P31377 255 aa-1.42□□□□□ -2.64
snR53snR53 DBF4P32325 704 aa-1.42□□□□□ -2.64
snR53snR53 SKG6P32900 734 aaPredicted RBP-1.42□□□□□ -2.64
snR53snR53 YCR041WP37265 110 aa-1.42□□□□□ -2.64
snR53snR53 NNF1P47149 201 aa-1.42□□□□□ -2.64
snR53snR53 TRF5P48561 642 aaKnown RBP-1.42□□□□□ -2.64
snR53snR53 SHE4P51534 789 aa-1.42□□□□□ -2.64
snR53snR53 CSL4P53859 292 aaPredicted RBP-1.42□□□□□ -2.64
snR53snR53 UBX2Q04228 584 aa-1.42□□□□□ -2.64
snR53snR53 RLP24Q07915 199 aaKnown RBP-1.42□□□□□ -2.64
snR53snR53 DEP1P31385 405 aa-1.43□□□□□ -2.64
snR53snR53 YEF1P32622 495 aa-1.43□□□□□ -2.64
snR53snR53 PEX22P39718 180 aa-1.43□□□□□ -2.64
snR53snR53 IME4P41833 600 aa-1.43□□□□□ -2.64
snR53snR53 VEL1P53058 206 aa-1.43□□□□□ -2.64
snR53snR53 ZPR1P53303 486 aaKnown RBP-1.43□□□□□ -2.64
snR53snR53 CEX1Q12453 761 aa-1.43□□□□□ -2.64
snR53snR53 PDC2P32896 925 aa-1.44□□□□□ -2.64
snR53snR53 NUP133P36161 1157 aa-1.44□□□□□ -2.64
snR53snR53 SYG1P40528 902 aa-1.44□□□□□ -2.64
snR53snR53 COG1P53079 417 aa-1.44□□□□□ -2.64
snR53snR53 CNM67P53865 581 aaKnown RBP-1.44□□□□□ -2.64
snR53snR53 YPL080CQ02826 108 aa-1.44□□□□□ -2.64
snR53snR53 COX17Q12287 69 aa-1.44□□□□□ -2.64
snR53snR53 MET2P08465 486 aa-1.45□□□□□ -2.64
snR53snR53 ASP3-2P0CX77 362 aa-1.45□□□□□ -2.64
snR53snR53 ASP3-3P0CX78 362 aa-1.45□□□□□ -2.64
snR53snR53 ASP3-4P0CX79 362 aa-1.45□□□□□ -2.64
snR53snR53 ASP3-1P0CZ17 362 aa-1.45□□□□□ -2.64
snR53snR53 ECM14P38836 430 aa-1.45□□□□□ -2.64
snR53snR53 DSE2P38844 325 aa-1.45□□□□□ -2.64
snR53snR53 PTI1P39927 425 aaPredicted RBP-1.45□□□□□ -2.64
snR53snR53 YIL029CP40538 142 aa-1.45□□□□□ -2.64
snR53snR53 MST27P53176 234 aa-1.45□□□□□ -2.64
snR53snR53 PAP2P53632 584 aaKnown RBP-1.45□□□□□ -2.64
snR53snR53 VTI1Q04338 217 aa-1.45□□□□□ -2.64
snR53snR53 RTN1Q04947 295 aaKnown RBP-1.45□□□□□ -2.64
snR53snR53 PHM6Q05637 104 aa-1.45□□□□□ -2.64
snR53snR53 ADH7P25377 361 aa-1.46□□□□□ -2.64
snR53snR53 ANR2P36090 516 aaPredicted RBP-1.46□□□□□ -2.64
snR53snR53 SMP1P38128 452 aa-1.46□□□□□ -2.64
snR53snR53 YBR138CP38277 524 aa-1.46□□□□□ -2.64
snR53snR53 CIN4P39110 191 aa-1.46□□□□□ -2.64
snR53snR53 YJL027CP47063 138 aaPredicted RBP-1.46□□□□□ -2.64
snR53snR53 DAN1P47178 298 aa-1.46□□□□□ -2.64
snR53snR53 VHT1P53241 593 aa-1.46□□□□□ -2.64
snR53snR53 RHO5P53879 331 aaKnown RBP-1.46□□□□□ -2.64
snR53snR53 CEG1Q01159 459 aaPredicted RBP-1.46□□□□□ -2.64
snR53snR53 SKI8Q02793 397 aaPredicted RBP-1.46□□□□□ -2.64
snR53snR53 EIS1Q05050 843 aaKnown RBP-1.46□□□□□ -2.64
snR53snR53 UBR2Q07963 1872 aa-1.47□□□□□ -2.64
snR53snR53 KRE1P17260 313 aa-1.47□□□□□ -2.64
snR53snR53 PWP1P21304 576 aaKnown RBP-1.47□□□□□ -2.64
snR53snR53 CMK2P22517 447 aa-1.47□□□□□ -2.64
snR53snR53 IMG1P25626 169 aa-1.47□□□□□ -2.64
snR53snR53 COX13P32799 129 aa-1.47□□□□□ -2.64
snR53snR53 TCD2P36101 447 aaKnown RBP-1.47□□□□□ -2.64
snR53snR53 MMS21P38632 267 aa-1.47□□□□□ -2.64
snR53snR53 YIP1P53039 248 aa-1.47□□□□□ -2.64
snR53snR53 YGR127WP53275 312 aa-1.47□□□□□ -2.64
snR53snR53 YLR345WQ06137 509 aa-1.47□□□□□ -2.64
snR53snR53 YGK3Q12222 375 aaPredicted RBP-1.47□□□□□ -2.64
snR53snR53 IMA3P0CW40 589 aa-1.48□□□□□ -2.65
snR53snR53 IMA4P0CW41 589 aa-1.48□□□□□ -2.65
snR53snR53 CKA2P19454 339 aa-1.48□□□□□ -2.65
snR53snR53 PHO80P20052 293 aa-1.48□□□□□ -2.65
snR53snR53 FAR1P21268 830 aa-1.48□□□□□ -2.65
snR53snR53 PUP3P25451 205 aaKnown RBP-1.48□□□□□ -2.65
snR53snR53 JLP2P40206 208 aa-1.48□□□□□ -2.65
snR53snR53 INA17Q02888 182 aa-1.48□□□□□ -2.65
snR53snR53 CGI121Q03705 181 aaKnown RBP-1.48□□□□□ -2.65
snR53snR53 AIM36Q03798 255 aa-1.48□□□□□ -2.65
snR53snR53 PSR1Q07800 427 aa-1.48□□□□□ -2.65
Retrieved 100 of 5,963 RNA–protein pairs in 65.8 ms