RNA–Protein interactions for RNA: YPR110C

RPC40, Transcript of RNA polymerase subunit AC40, yeastyeast

Gene RPC40, Length 1,008 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
RPC40YPR110C RCF1Q03713 159 aa2.97□□□□□ -1.93
RPC40YPR110C SXM1Q04175 944 aaKnown RBP2.97□□□□□ -1.93
RPC40YPR110C YMR130WQ04223 302 aa2.97□□□□□ -1.93
RPC40YPR110C YAP7Q08182 245 aa2.97□□□□□ -1.93
RPC40YPR110C UAF30Q08747 228 aa2.97□□□□□ -1.93
RPC40YPR110C YLR278CQ05854 1341 aa2.96□□□□□ -1.93
RPC40YPR110C SKI3P17883 1432 aaKnown RBP2.96□□□□□ -1.94
RPC40YPR110C CYB2P00175 591 aa2.96□□□□□ -1.94
RPC40YPR110C HIS4P00815 799 aaKnown RBP2.96□□□□□ -1.94
RPC40YPR110C SCEIP03882 235 aa2.96□□□□□ -1.94
RPC40YPR110C ATR1P13090 542 aa2.96□□□□□ -1.94
RPC40YPR110C MTF1P14908 341 aaKnown RBP2.96□□□□□ -1.94
RPC40YPR110C SRV2P17555 526 aaKnown RBP2.96□□□□□ -1.94
RPC40YPR110C SPO7P18410 259 aa2.96□□□□□ -1.94
RPC40YPR110C CLN1P20437 546 aa2.96□□□□□ -1.94
RPC40YPR110C RHB1P25378 209 aa2.96□□□□□ -1.94
RPC40YPR110C CDC60P26637 1090 aaKnown RBP2.96□□□□□ -1.94
RPC40YPR110C BEM1P29366 551 aa2.96□□□□□ -1.94
RPC40YPR110C ECM25P32525 599 aa2.96□□□□□ -1.94
RPC40YPR110C PTR2P32901 601 aa2.96□□□□□ -1.94
RPC40YPR110C FRE2P36033 711 aa2.96□□□□□ -1.94
RPC40YPR110C SER3P40054 469 aa2.96□□□□□ -1.94
RPC40YPR110C SHO1P40073 367 aa2.96□□□□□ -1.94
RPC40YPR110C ALG8P40351 577 aa2.96□□□□□ -1.94
RPC40YPR110C JEM1P40358 645 aa2.96□□□□□ -1.94
RPC40YPR110C COS10P52924 374 aa2.96□□□□□ -1.94
RPC40YPR110C YGR111WP53265 400 aa2.96□□□□□ -1.94
RPC40YPR110C DSL1P53847 754 aa2.96□□□□□ -1.94
RPC40YPR110C OAZ1Q02803 292 aa2.96□□□□□ -1.94
RPC40YPR110C DCS1Q06151 350 aa2.96□□□□□ -1.94
RPC40YPR110C BUG1Q12191 341 aa2.96□□□□□ -1.94
RPC40YPR110C GPM3Q12326 303 aa2.96□□□□□ -1.94
RPC40YPR110C CTF3Q12748 733 aa2.96□□□□□ -1.94
RPC40YPR110C YCR100CP25606 316 aa2.95□□□□□ -1.94
RPC40YPR110C CRM1P30822 1084 aaKnown RBP2.95□□□□□ -1.94
RPC40YPR110C RSM22P36056 628 aa2.95□□□□□ -1.94
RPC40YPR110C MMS4P38257 691 aa2.95□□□□□ -1.94
RPC40YPR110C DHH1P39517 506 aaKnown RBP2.95□□□□□ -1.94
RPC40YPR110C ISC1P40015 477 aaKnown RBP2.95□□□□□ -1.94
RPC40YPR110C RPR2P40571 144 aa2.95□□□□□ -1.94
RPC40YPR110C SNM1P40993 198 aa2.95□□□□□ -1.94
RPC40YPR110C YJL132WP47014 750 aa2.95□□□□□ -1.94
RPC40YPR110C ODC1Q03028 310 aa2.95□□□□□ -1.94
RPC40YPR110C YDR387CQ04162 555 aa2.95□□□□□ -1.94
RPC40YPR110C NDD1Q08887 554 aa2.95□□□□□ -1.94
RPC40YPR110C SPE3Q12074 293 aaKnown RBP2.95□□□□□ -1.94
RPC40YPR110C YPK9Q12697 1472 aa2.95□□□□□ -1.94
RPC40YPR110C LPD1P09624 499 aaKnown RBP2.94□□□□□ -1.94
RPC40YPR110C YML002WP0CF17 737 aa2.94□□□□□ -1.94
RPC40YPR110C ARO3P14843 370 aaKnown RBP2.94□□□□□ -1.94
RPC40YPR110C MNE1P24720 663 aa2.94□□□□□ -1.94
RPC40YPR110C RNA14P25298 677 aaKnown RBP2.94□□□□□ -1.94
RPC40YPR110C SMY1P32364 656 aaKnown RBP2.94□□□□□ -1.94
RPC40YPR110C PUP2P32379 260 aa2.94□□□□□ -1.94
RPC40YPR110C APE2P32454 952 aaKnown RBP2.94□□□□□ -1.94
RPC40YPR110C GLC7P32598 312 aaKnown RBP2.94□□□□□ -1.94
RPC40YPR110C BLI1P35727 113 aa2.94□□□□□ -1.94
RPC40YPR110C SWH1P35845 1188 aa2.94□□□□□ -1.94
RPC40YPR110C PMU1P36069 295 aa2.94□□□□□ -1.94
RPC40YPR110C MTC4P38335 694 aaKnown RBP2.94□□□□□ -1.94
RPC40YPR110C YHR054CP38780 354 aa2.94□□□□□ -1.94
RPC40YPR110C RPH1P39956 796 aa2.94□□□□□ -1.94
RPC40YPR110C VHS2P40463 436 aa2.94□□□□□ -1.94
RPC40YPR110C GCD10P41814 478 aa2.94□□□□□ -1.94
RPC40YPR110C YIP1P53039 248 aa2.94□□□□□ -1.94
RPC40YPR110C YIF1P53845 314 aaKnown RBP2.94□□□□□ -1.94
RPC40YPR110C TAF12Q03761 539 aa2.94□□□□□ -1.94
RPC40YPR110C RPN9Q04062 393 aaKnown RBP2.94□□□□□ -1.94
RPC40YPR110C YMR317WQ04893 1140 aa2.94□□□□□ -1.94
RPC40YPR110C HEL2Q05580 639 aaKnown RBP2.94□□□□□ -1.94
RPC40YPR110C DIS3Q08162 1001 aaKnown RBP2.94□□□□□ -1.94
RPC40YPR110C VPS54Q12071 889 aa2.94□□□□□ -1.94
RPC40YPR110C AYT1Q12226 474 aa2.94□□□□□ -1.94
RPC40YPR110C PAR32Q12515 295 aaKnown RBP2.94□□□□□ -1.94
RPC40YPR110C MTR10Q99189 972 aa2.94□□□□□ -1.94
RPC40YPR110C COX3P00420 269 aa2.93□□□□□ -1.94
RPC40YPR110C ADE4P04046 510 aaKnown RBP2.93□□□□□ -1.94
RPC40YPR110C YAR066WP0CX18 203 aa2.93□□□□□ -1.94
RPC40YPR110C YHR214WP0CX19 203 aa2.93□□□□□ -1.94
RPC40YPR110C RPL20AP0CX23 172 aaKnown RBP2.93□□□□□ -1.94
RPC40YPR110C RPL20BP0CX24 172 aaPredicted RBP2.93□□□□□ -1.94
RPC40YPR110C RPL1AP0CX43 217 aaKnown RBP2.93□□□□□ -1.94
RPC40YPR110C RPL1BP0CX44 217 aaKnown RBP2.93□□□□□ -1.94
RPC40YPR110C CTR86P25355 563 aa2.93□□□□□ -1.94
RPC40YPR110C PUT3P25502 979 aaPredicted RBP2.93□□□□□ -1.94
RPC40YPR110C ATS1P31386 333 aa2.93□□□□□ -1.94
RPC40YPR110C NDI1P32340 513 aa2.93□□□□□ -1.94
RPC40YPR110C MDL1P33310 695 aa2.93□□□□□ -1.94
RPC40YPR110C SOR1P35497 357 aaKnown RBP2.93□□□□□ -1.94
RPC40YPR110C YCR041WP37265 110 aa2.93□□□□□ -1.94
RPC40YPR110C ASC1P38011 319 aaKnown RBP2.93□□□□□ -1.94
RPC40YPR110C YAL037WP39728 267 aa2.93□□□□□ -1.94
RPC40YPR110C GDI1P39958 451 aaKnown RBP2.93□□□□□ -1.94
RPC40YPR110C RRT5P43607 289 aa2.93□□□□□ -1.94
RPC40YPR110C PHO86P46956 311 aa2.93□□□□□ -1.94
RPC40YPR110C YDL186WP48568 277 aa2.93□□□□□ -1.94
RPC40YPR110C AVT4P50944 713 aa2.93□□□□□ -1.94
RPC40YPR110C PCP1P53259 346 aa2.93□□□□□ -1.94
RPC40YPR110C YLR456WQ06199 204 aa2.93□□□□□ -1.94
RPC40YPR110C SOR2Q07786 357 aa2.93□□□□□ -1.94
Retrieved 100 of 5,963 RNA–protein pairs in 74.4 ms