RNA–Protein interactions for RNA: YPR103W

PRE2, Transcript of Beta 5 subunit of the 20S proteasome, yeast

Gene PRE2, Length 864 nt, Biotype protein coding.

RNA		Protein				Prediction (catRAPID)		Interaction (RIP-Chip)
Gene	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	Detected Interaction
PRE2	YPR103W	SET6	Q12529	373 aa		5.2	□□□□□ -1.58
PRE2	YPR103W	SRV2	P17555	526 aa	Known RBP	5.19	□□□□□ -1.58
PRE2	YPR103W	YCR100C	P25606	316 aa		5.19	□□□□□ -1.58
PRE2	YPR103W	BRF1	P29056	596 aa		5.19	□□□□□ -1.58
PRE2	YPR103W	YCR041W	P37265	110 aa		5.19	□□□□□ -1.58
PRE2	YPR103W	YAT2	P40017	923 aa		5.19	□□□□□ -1.58
PRE2	YPR103W	DSL1	P53847	754 aa		5.19	□□□□□ -1.58
PRE2	YPR103W	YMR130W	Q04223	302 aa		5.19	□□□□□ -1.58
PRE2	YPR103W	DIS3	Q08162	1001 aa	Known RBP	5.19	□□□□□ -1.58
PRE2	YPR103W	GPM3	Q12326	303 aa		5.19	□□□□□ -1.58
PRE2	YPR103W	YMR230W-A	Q3E7B5	62 aa		5.19	□□□□□ -1.58
PRE2	YPR103W	TY1B-A	O13527	1196 aa	Known RBP	5.18	□□□□□ -1.58
PRE2	YPR103W	ARO3	P14843	370 aa	Known RBP	5.18	□□□□□ -1.58
PRE2	YPR103W	MCK1	P21965	375 aa	Known RBP	5.18	□□□□□ -1.58
PRE2	YPR103W	CDC60	P26637	1090 aa	Known RBP	5.18	□□□□□ -1.58
PRE2	YPR103W	GLC7	P32598	312 aa	Known RBP	5.18	□□□□□ -1.58
PRE2	YPR103W	SOR1	P35497	357 aa	Known RBP	5.18	□□□□□ -1.58
PRE2	YPR103W	MEP2	P41948	499 aa		5.18	□□□□□ -1.58
PRE2	YPR103W	TOM22	P49334	152 aa		5.18	□□□□□ -1.58
PRE2	YPR103W	YIP1	P53039	248 aa		5.18	□□□□□ -1.58
PRE2	YPR103W	OGG1	P53397	376 aa	Predicted RBP	5.18	□□□□□ -1.58
PRE2	YPR103W	CIK1	Q01649	594 aa		5.18	□□□□□ -1.58
PRE2	YPR103W	PNG1	Q02890	363 aa		5.18	□□□□□ -1.58
PRE2	YPR103W	HOT1	Q03213	719 aa		5.18	□□□□□ -1.58
PRE2	YPR103W	DCS1	Q06151	350 aa		5.18	□□□□□ -1.58
PRE2	YPR103W	SOR2	Q07786	357 aa		5.18	□□□□□ -1.58
PRE2	YPR103W	UAF30	Q08747	228 aa		5.18	□□□□□ -1.58
PRE2	YPR103W	HSP42	Q12329	375 aa		5.18	□□□□□ -1.58
PRE2	YPR103W	CYB2	P00175	591 aa		5.17	□□□□□ -1.58
PRE2	YPR103W	COX3	P00420	269 aa		5.17	□□□□□ -1.58
PRE2	YPR103W	ATR1	P13090	542 aa		5.17	□□□□□ -1.58
PRE2	YPR103W	RPI1	P23250	407 aa	Known RBP	5.17	□□□□□ -1.58
PRE2	YPR103W	PUT3	P25502	979 aa	Predicted RBP	5.17	□□□□□ -1.58
PRE2	YPR103W	NDI1	P32340	513 aa		5.17	□□□□□ -1.58
PRE2	YPR103W	APE2	P32454	952 aa	Known RBP	5.17	□□□□□ -1.58
PRE2	YPR103W	RSM22	P36056	628 aa		5.17	□□□□□ -1.58
PRE2	YPR103W	YDL186W	P48568	277 aa		5.17	□□□□□ -1.58
PRE2	YPR103W	OCA2	P53949	197 aa		5.17	□□□□□ -1.58
PRE2	YPR103W	CRZ1	P53968	678 aa		5.17	□□□□□ -1.58
PRE2	YPR103W	OAZ1	Q02803	292 aa		5.17	□□□□□ -1.58
PRE2	YPR103W	HEL2	Q05580	639 aa	Known RBP	5.17	□□□□□ -1.58
PRE2	YPR103W	VPS54	Q12071	889 aa		5.17	□□□□□ -1.58
PRE2	YPR103W	SCEI	P03882	235 aa		5.16	□□□□□ -1.58
PRE2	YPR103W	AGA1	P32323	725 aa		5.16	□□□□□ -1.58
PRE2	YPR103W	FMP46	P36141	133 aa	Known RBP	5.16	□□□□□ -1.58
PRE2	YPR103W	YHR054C	P38780	354 aa		5.16	□□□□□ -1.58
PRE2	YPR103W	MDM31	P38880	579 aa		5.16	□□□□□ -1.58
PRE2	YPR103W	YGR111W	P53265	400 aa		5.16	□□□□□ -1.58
PRE2	YPR103W	ODC1	Q03028	310 aa		5.16	□□□□□ -1.58
PRE2	YPR103W	PIR3	Q03180	325 aa		5.16	□□□□□ -1.58
PRE2	YPR103W	GYL1	Q04322	720 aa		5.16	□□□□□ -1.58
PRE2	YPR103W	TIP41	Q12199	356 aa		5.16	□□□□□ -1.58
PRE2	YPR103W	ILV5	P06168	395 aa	Known RBP	5.15	□□□□□ -1.59
PRE2	YPR103W	GDH1	P07262	454 aa	Known RBP	5.15	□□□□□ -1.59
PRE2	YPR103W	YAR066W	P0CX18	203 aa		5.15	□□□□□ -1.59
PRE2	YPR103W	YHR214W	P0CX19	203 aa		5.15	□□□□□ -1.59
PRE2	YPR103W	ITR1	P30605	584 aa		5.15	□□□□□ -1.59
PRE2	YPR103W	PEX5	P35056	612 aa		5.15	□□□□□ -1.59
PRE2	YPR103W	MMS4	P38257	691 aa		5.15	□□□□□ -1.59
PRE2	YPR103W	YJL213W	P40896	331 aa		5.15	□□□□□ -1.59
PRE2	YPR103W	LCB2	P40970	561 aa		5.15	□□□□□ -1.59
PRE2	YPR103W	BUD27	P43573	796 aa	Known RBP RIP-Chip data	5.15	□□□□□ -1.59	not detected
PRE2	YPR103W	YGL260W	P53056	76 aa		5.15	□□□□□ -1.59
PRE2	YPR103W	POP6	P53218	158 aa		5.15	□□□□□ -1.59
PRE2	YPR103W	YBR298C-A	Q8TGK4	73 aa		5.15	□□□□□ -1.59
PRE2	YPR103W	HIS4	P00815	799 aa	Known RBP	5.14	□□□□□ -1.59
PRE2	YPR103W	SPO7	P18410	259 aa		5.14	□□□□□ -1.59
PRE2	YPR103W	PCA1	P38360	1216 aa		5.14	□□□□□ -1.59
PRE2	YPR103W	PHO86	P46956	311 aa		5.14	□□□□□ -1.59
PRE2	YPR103W	YJL132W	P47014	750 aa		5.14	□□□□□ -1.59
PRE2	YPR103W	WSC2	P53832	503 aa		5.14	□□□□□ -1.59
PRE2	YPR103W	YPR022C	Q12139	1133 aa		5.14	□□□□□ -1.59
PRE2	YPR103W	ORT1	Q12375	292 aa		5.14	□□□□□ -1.59
PRE2	YPR103W	CHS1	P08004	1131 aa		5.13	□□□□□ -1.59
PRE2	YPR103W	PRP16	P15938	1071 aa	Predicted RBP	5.13	□□□□□ -1.59
PRE2	YPR103W	MNE1	P24720	663 aa		5.13	□□□□□ -1.59
PRE2	YPR103W	CTR86	P25355	563 aa		5.13	□□□□□ -1.59
PRE2	YPR103W	NIP1	P32497	812 aa	Known RBP	5.13	□□□□□ -1.59
PRE2	YPR103W	RRP4	P38792	359 aa	Known RBP	5.13	□□□□□ -1.59
PRE2	YPR103W	KRE9	P39005	276 aa		5.13	□□□□□ -1.59
PRE2	YPR103W	SPE3	Q12074	293 aa	Known RBP	5.13	□□□□□ -1.59
PRE2	YPR103W	PAR32	Q12515	295 aa	Known RBP	5.13	□□□□□ -1.59
PRE2	YPR103W	LPD1	P09624	499 aa	Known RBP	5.12	□□□□□ -1.59
PRE2	YPR103W	SMY1	P32364	656 aa	Known RBP	5.12	□□□□□ -1.59
PRE2	YPR103W	VHS2	P40463	436 aa		5.12	□□□□□ -1.59
PRE2	YPR103W	EFM4	P40516	257 aa		5.12	□□□□□ -1.59
PRE2	YPR103W	MTR10	Q99189	972 aa		5.12	□□□□□ -1.59
PRE2	YPR103W	SAM1	P10659	382 aa	Known RBP	5.11	□□□□□ -1.59
PRE2	YPR103W	SAM2	P19358	384 aa	Known RBP	5.11	□□□□□ -1.59
PRE2	YPR103W	YUR1	P26725	428 aa		5.11	□□□□□ -1.59
PRE2	YPR103W	TIP1	P27654	210 aa	Predicted RBP	5.11	□□□□□ -1.59
PRE2	YPR103W	PRO3	P32263	286 aa	Known RBP	5.11	□□□□□ -1.59
PRE2	YPR103W	LTV1	P34078	463 aa		5.11	□□□□□ -1.59
PRE2	YPR103W	RRN10	P38204	145 aa		5.11	□□□□□ -1.59
PRE2	YPR103W	ZTA1	P38230	334 aa	Known RBP	5.11	□□□□□ -1.59
PRE2	YPR103W	LYS1	P38998	373 aa	RIP-Chip data	5.11	□□□□□ -1.59	not detected
PRE2	YPR103W	FRE4	P53746	719 aa		5.11	□□□□□ -1.59
PRE2	YPR103W	VPS9	P54787	451 aa		5.11	□□□□□ -1.59
PRE2	YPR103W	SNT309	Q06091	175 aa	Predicted RBP	5.11	□□□□□ -1.59
PRE2	YPR103W	YLR456W	Q06199	204 aa		5.11	□□□□□ -1.59

Retrieved 100 of 5,963 RNA–protein pairs in 24.9 ms