RNA–Protein interactions for RNA: YPL072W

UBP16, Transcript of Deubiquitinating enzyme anchored to the outer mitochondrial membrane, yeast

Gene UBP16, Length 1,500 nt, Biotype protein coding.

RNA		Protein				Prediction (catRAPID)		Interaction (RIP-Chip)
Gene	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	Detected Interaction
UBP16	YPL072W	YBL059W	P34224	193 aa		2.6	□□□□□ -1.99
UBP16	YPL072W	RXT2	P38255	430 aa		2.6	□□□□□ -1.99
UBP16	YPL072W	SEC28	P40509	296 aa	Known RBP	2.6	□□□□□ -1.99
UBP16	YPL072W	YGR210C	P42942	411 aa		2.6	□□□□□ -1.99
UBP16	YPL072W	CAK1	P43568	368 aa	Predicted RBP	2.6	□□□□□ -1.99
UBP16	YPL072W	URB2	P47108	1174 aa		2.6	□□□□□ -1.99
UBP16	YPL072W	BNI5	P53890	448 aa	Known RBP	2.6	□□□□□ -1.99
UBP16	YPL072W	DON1	Q05610	365 aa		2.6	□□□□□ -1.99
UBP16	YPL072W	RRP45	Q05636	305 aa	Known RBP	2.6	□□□□□ -1.99
UBP16	YPL072W	YLR345W	Q06137	509 aa		2.6	□□□□□ -1.99
UBP16	YPL072W	BRR1	Q99177	341 aa	Predicted RBP	2.6	□□□□□ -1.99
UBP16	YPL072W	SUP35	P05453	685 aa	Known RBP	2.59	□□□□□ -1.99
UBP16	YPL072W	SPS4	P09937	338 aa		2.59	□□□□□ -1.99
UBP16	YPL072W	HEM15	P16622	393 aa		2.59	□□□□□ -1.99
UBP16	YPL072W	GLK1	P17709	500 aa	Known RBP	2.59	□□□□□ -1.99
UBP16	YPL072W	ELO2	P25358	347 aa		2.59	□□□□□ -1.99
UBP16	YPL072W	HXT1	P32465	570 aa		2.59	□□□□□ -1.99
UBP16	YPL072W	ANP1	P32629	500 aa		2.59	□□□□□ -1.99
UBP16	YPL072W	YME2	P32843	850 aa		2.59	□□□□□ -1.99
UBP16	YPL072W	NDT80	P38830	627 aa		2.59	□□□□□ -1.99
UBP16	YPL072W	CAJ1	P39101	391 aa		2.59	□□□□□ -1.99
UBP16	YPL072W	FMS1	P50264	508 aa		2.59	□□□□□ -1.99
UBP16	YPL072W	YGL138C	P53122	345 aa		2.59	□□□□□ -1.99
UBP16	YPL072W	CAF40	P53829	373 aa		2.59	□□□□□ -1.99
UBP16	YPL072W	RPA49	Q01080	415 aa	Predicted RBP	2.59	□□□□□ -1.99
UBP16	YPL072W	OAZ1	Q02803	292 aa		2.59	□□□□□ -1.99
UBP16	YPL072W	ELP3	Q02908	557 aa	Known RBP	2.59	□□□□□ -1.99
UBP16	YPL072W	PEX25	Q02969	394 aa		2.59	□□□□□ -1.99
UBP16	YPL072W	HOT1	Q03213	719 aa		2.59	□□□□□ -1.99
UBP16	YPL072W	ARX1	Q03862	593 aa	Known RBP	2.59	□□□□□ -1.99
UBP16	YPL072W	KEL3	Q08979	651 aa	Predicted RBP	2.59	□□□□□ -1.99
UBP16	YPL072W	VPS54	Q12071	889 aa		2.59	□□□□□ -1.99
UBP16	YPL072W	RAV1	P47104	1357 aa		2.59	□□□□□ -1.99
UBP16	YPL072W	HHF1	P02309	103 aa	Known RBP	2.58	□□□□□ -2
UBP16	YPL072W	RPL31B	P0C2H9	113 aa	Known RBP	2.58	□□□□□ -2
UBP16	YPL072W	PRP2	P20095	876 aa	Predicted RBP	2.58	□□□□□ -2
UBP16	YPL072W	PPH22	P23595	377 aa		2.58	□□□□□ -2
UBP16	YPL072W	URA7	P28274	579 aa	Known RBP	2.58	□□□□□ -2
UBP16	YPL072W	RAD14	P28519	371 aa		2.58	□□□□□ -2
UBP16	YPL072W	AFG1	P32317	509 aa		2.58	□□□□□ -2
UBP16	YPL072W	HXT3	P32466	567 aa	Known RBP	2.58	□□□□□ -2
UBP16	YPL072W	ARA1	P38115	344 aa		2.58	□□□□□ -2
UBP16	YPL072W	PTH1	P38876	190 aa	Known RBP	2.58	□□□□□ -2
UBP16	YPL072W	FAU1	P40099	211 aa		2.58	□□□□□ -2
UBP16	YPL072W	AIM22	P47051	409 aa		2.58	□□□□□ -2
UBP16	YPL072W	YGR016W	P53209	190 aa		2.58	□□□□□ -2
UBP16	YPL072W	HEF3	P53978	1044 aa	Known RBP	2.58	□□□□□ -2
UBP16	YPL072W	PIR3	Q03180	325 aa		2.58	□□□□□ -2
UBP16	YPL072W	PBA1	Q05778	276 aa		2.58	□□□□□ -2
UBP16	YPL072W	DCI1	Q08558	271 aa		2.58	□□□□□ -2
UBP16	YPL072W	TMS1	Q12116	473 aa		2.58	□□□□□ -2
UBP16	YPL072W	GPM3	Q12326	303 aa		2.58	□□□□□ -2
UBP16	YPL072W	TOA1	P32773	286 aa		2.58	□□□□□ -2
UBP16	YPL072W	CBP4	P37267	147 aa		2.58	□□□□□ -2
UBP16	YPL072W	MMS4	P38257	691 aa		2.58	□□□□□ -2
UBP16	YPL072W	YHR054C	P38780	354 aa		2.58	□□□□□ -2
UBP16	YPL072W	MTC6	P38849	526 aa		2.58	□□□□□ -2
UBP16	YPL072W	YIL067C	P40514	678 aa		2.58	□□□□□ -2
UBP16	YPL072W	YGR149W	P48236	432 aa		2.58	□□□□□ -2
UBP16	YPL072W	YGR111W	P53265	400 aa		2.58	□□□□□ -2
UBP16	YPL072W	ZPR1	P53303	486 aa	Known RBP	2.58	□□□□□ -2
UBP16	YPL072W	EOS1	P53938	366 aa		2.58	□□□□□ -2
UBP16	YPL072W	ARK1	P53974	638 aa		2.58	□□□□□ -2
UBP16	YPL072W	SOV1	Q04748	898 aa		2.58	□□□□□ -2
UBP16	YPL072W	ESA1	Q08649	445 aa		2.58	□□□□□ -2
UBP16	YPL072W	SPE3	Q12074	293 aa	Known RBP	2.58	□□□□□ -2
UBP16	YPL072W	SMF3	Q12078	473 aa	Predicted RBP	2.58	□□□□□ -2
UBP16	YPL072W	MED2	Q12124	431 aa		2.58	□□□□□ -2
UBP16	YPL072W	RHO2	P06781	192 aa		2.57	□□□□□ -2
UBP16	YPL072W	CHS1	P08004	1131 aa		2.57	□□□□□ -2
UBP16	YPL072W	ISY1	P21374	235 aa	Predicted RBP	2.57	□□□□□ -2
UBP16	YPL072W	SPB1	P25582	841 aa	Predicted RBP	2.57	□□□□□ -2
UBP16	YPL072W	ERV1	P27882	189 aa		2.57	□□□□□ -2
UBP16	YPL072W	IDH2	P28241	369 aa	Known RBP	2.57	□□□□□ -2
UBP16	YPL072W	ARO2	P28777	376 aa	Known RBP	2.57	□□□□□ -2
UBP16	YPL072W	PUP2	P32379	260 aa		2.57	□□□□□ -2
UBP16	YPL072W	RML2	P32611	393 aa		2.57	□□□□□ -2
UBP16	YPL072W	REC114	P32841	428 aa		2.57	□□□□□ -2
UBP16	YPL072W	LTV1	P34078	463 aa		2.57	□□□□□ -2
UBP16	YPL072W	GCD10	P41814	478 aa		2.57	□□□□□ -2
UBP16	YPL072W	YFL067W	P43537	175 aa		2.57	□□□□□ -2
UBP16	YPL072W	TCB2	P48231	1178 aa		2.57	□□□□□ -2
UBP16	YPL072W	RMD9	P53140	646 aa	Known RBP	2.57	□□□□□ -2
UBP16	YPL072W	YGL039W	P53183	348 aa	Known RBP	2.57	□□□□□ -2
UBP16	YPL072W	SKO1	Q02100	647 aa		2.57	□□□□□ -2
UBP16	YPL072W	MHR1	Q06630	226 aa		2.57	□□□□□ -2
UBP16	YPL072W	TMC1	Q08422	150 aa	Predicted RBP	2.57	□□□□□ -2
UBP16	YPL072W	HSP42	Q12329	375 aa		2.57	□□□□□ -2
UBP16	YPL072W	RKM5	Q12367	367 aa		2.57	□□□□□ -2
UBP16	YPL072W	MES1	P00958	751 aa	Known RBP	2.56	□□□□□ -2
UBP16	YPL072W	COR1	P07256	457 aa		2.56	□□□□□ -2
UBP16	YPL072W	NAT1	P12945	854 aa	Known RBP	2.56	□□□□□ -2
UBP16	YPL072W	BUB3	P26449	341 aa		2.56	□□□□□ -2
UBP16	YPL072W	BRF1	P29056	596 aa		2.56	□□□□□ -2
UBP16	YPL072W	NDI1	P32340	513 aa		2.56	□□□□□ -2
UBP16	YPL072W	DPH2	P32461	534 aa		2.56	□□□□□ -2
UBP16	YPL072W	SPR1	P32603	445 aa		2.56	□□□□□ -2
UBP16	YPL072W	RPS0A	P32905	252 aa	Known RBP	2.56	□□□□□ -2
UBP16	YPL072W	RRP1	P35178	278 aa	Predicted RBP	2.56	□□□□□ -2
UBP16	YPL072W	FRE2	P36033	711 aa		2.56	□□□□□ -2

Retrieved 100 of 5,963 RNA–protein pairs in 22.7 ms