RNA–Protein interactions for RNA: YMR197C

VTI1, Transcript of Protein involved in cis-Golgi membrane traffic, yeastyeast

Gene VTI1, Length 654 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
VTI1YMR197C DIA4P38705 446 aaPredicted RBP2.19□□□□□ -2.06
VTI1YMR197C YDR089WP38966 869 aa2.19□□□□□ -2.06
VTI1YMR197C YTA12P40341 825 aa2.19□□□□□ -2.06
VTI1YMR197C ALK1P43633 760 aaKnown RBP2.19□□□□□ -2.06
VTI1YMR197C SMC3P47037 1230 aa2.19□□□□□ -2.06
VTI1YMR197C URB2P47108 1174 aa2.19□□□□□ -2.06
VTI1YMR197C YGR149WP48236 432 aa2.19□□□□□ -2.06
VTI1YMR197C YGL242CP53066 181 aa2.19□□□□□ -2.06
VTI1YMR197C YGL138CP53122 345 aa2.19□□□□□ -2.06
VTI1YMR197C YGR127WP53275 312 aa2.19□□□□□ -2.06
VTI1YMR197C RHO5P53879 331 aaKnown RBP2.19□□□□□ -2.06
VTI1YMR197C ALF1P53904 254 aa2.19□□□□□ -2.06
VTI1YMR197C AQR1P53943 586 aa2.19□□□□□ -2.06
VTI1YMR197C PRO2P54885 456 aaKnown RBP2.19□□□□□ -2.06
VTI1YMR197C SKO1Q02100 647 aa2.19□□□□□ -2.06
VTI1YMR197C PDS5Q04264 1277 aa2.19□□□□□ -2.06
VTI1YMR197C RNH1Q04740 348 aa2.19□□□□□ -2.06
VTI1YMR197C ERP1Q05359 219 aaKnown RBP2.19□□□□□ -2.06
VTI1YMR197C RRP45Q05636 305 aaKnown RBP2.19□□□□□ -2.06
VTI1YMR197C CDC45Q08032 650 aa2.19□□□□□ -2.06
VTI1YMR197C UAF30Q08747 228 aa2.19□□□□□ -2.06
VTI1YMR197C PFK27Q12471 397 aaPredicted RBP2.19□□□□□ -2.06
VTI1YMR197C NBL1Q3E7Y6 73 aa2.19□□□□□ -2.06
VTI1YMR197C MRP13P12686 339 aa2.18□□□□□ -2.06
VTI1YMR197C TAL1P15019 335 aaKnown RBP2.18□□□□□ -2.06
VTI1YMR197C PUT4P15380 627 aa2.18□□□□□ -2.06
VTI1YMR197C DAP2P18962 818 aa2.18□□□□□ -2.06
VTI1YMR197C URA4P20051 364 aa2.18□□□□□ -2.06
VTI1YMR197C PPH22P23595 377 aa2.18□□□□□ -2.06
VTI1YMR197C SNT1P25357 1226 aa2.18□□□□□ -2.06
VTI1YMR197C IMG1P25626 169 aa2.18□□□□□ -2.06
VTI1YMR197C IDH2P28241 369 aaKnown RBP2.18□□□□□ -2.06
VTI1YMR197C PTR2P32901 601 aa2.18□□□□□ -2.06
VTI1YMR197C YBR144CP34215 104 aa2.18□□□□□ -2.06
VTI1YMR197C MRPL40P36534 297 aa2.18□□□□□ -2.06
VTI1YMR197C UIP3P39547 235 aa2.18□□□□□ -2.06
VTI1YMR197C AIP1P46680 615 aaKnown RBP2.18□□□□□ -2.06
VTI1YMR197C DPB11P47027 764 aaPredicted RBP2.18□□□□□ -2.06
VTI1YMR197C APT1P49435 187 aaKnown RBP2.18□□□□□ -2.06
VTI1YMR197C YGL082WP53155 381 aa2.18□□□□□ -2.06
VTI1YMR197C EFM6P53970 246 aa2.18□□□□□ -2.06
VTI1YMR197C RRN5Q02983 363 aa2.18□□□□□ -2.06
VTI1YMR197C ACL4Q03771 387 aa2.18□□□□□ -2.06
VTI1YMR197C RPN9Q04062 393 aaKnown RBP2.18□□□□□ -2.06
VTI1YMR197C RPC11Q04307 110 aaPredicted RBP2.18□□□□□ -2.06
VTI1YMR197C SIL1Q08199 421 aa2.18□□□□□ -2.06
VTI1YMR197C AEP3Q12089 606 aa2.18□□□□□ -2.06
VTI1YMR197C MED2Q12124 431 aa2.18□□□□□ -2.06
VTI1YMR197C ATG9Q12142 997 aa2.18□□□□□ -2.06
VTI1YMR197C LEU9Q12166 604 aaKnown RBP2.18□□□□□ -2.06
VTI1YMR197C INP53Q12271 1107 aa2.18□□□□□ -2.06
VTI1YMR197C YDL007C-AQ2V2Q0 85 aa2.18□□□□□ -2.06
VTI1YMR197C YIL002W-AQ3E7Z5 69 aa2.18□□□□□ -2.06
VTI1YMR197C GAL7P08431 366 aa2.17□□□□□ -2.06
VTI1YMR197C SNF3P10870 884 aa2.17□□□□□ -2.06
VTI1YMR197C SPO7P18410 259 aa2.17□□□□□ -2.06
VTI1YMR197C ART10P18634 518 aaKnown RBP2.17□□□□□ -2.06
VTI1YMR197C CLN1P20437 546 aa2.17□□□□□ -2.06
VTI1YMR197C DBP3P20447 523 aaKnown RBP2.17□□□□□ -2.06
VTI1YMR197C SPE2P21182 396 aa2.17□□□□□ -2.06
VTI1YMR197C SEC62P21825 274 aa2.17□□□□□ -2.06
VTI1YMR197C BUD5P25300 642 aaPredicted RBP2.17□□□□□ -2.06
VTI1YMR197C BOS1P25385 244 aa2.17□□□□□ -2.06
VTI1YMR197C PUP3P25451 205 aaKnown RBP2.17□□□□□ -2.06
VTI1YMR197C AFG1P32317 509 aa2.17□□□□□ -2.06
VTI1YMR197C YNK1P36010 153 aaKnown RBP2.17□□□□□ -2.06
VTI1YMR197C PIM1P36775 1133 aa2.17□□□□□ -2.06
VTI1YMR197C ARA1P38115 344 aa2.17□□□□□ -2.06
VTI1YMR197C PFF1P38244 976 aa2.17□□□□□ -2.06
VTI1YMR197C MMS4P38257 691 aa2.17□□□□□ -2.06
VTI1YMR197C ICS2P38284 255 aa2.17□□□□□ -2.06
VTI1YMR197C TIF5P38431 405 aaKnown RBP2.17□□□□□ -2.06
VTI1YMR197C MSR1P38714 643 aa2.17□□□□□ -2.06
VTI1YMR197C UBA4P38820 440 aa2.17□□□□□ -2.06
VTI1YMR197C BFR1P38934 470 aaKnown RBP RIP-Chip data2.17□□□□□ -2.06not detected
VTI1YMR197C SMC2P38989 1170 aaKnown RBP2.17□□□□□ -2.06
VTI1YMR197C SER3P40054 469 aa2.17□□□□□ -2.06
VTI1YMR197C PTR3P43606 678 aa2.17□□□□□ -2.06
VTI1YMR197C COS5P47187 383 aa2.17□□□□□ -2.06
VTI1YMR197C FMS1P50264 508 aa2.17□□□□□ -2.06
VTI1YMR197C CAF130P53280 1122 aaPredicted RBP2.17□□□□□ -2.06
VTI1YMR197C RPT4P53549 437 aaKnown RBP2.17□□□□□ -2.06
VTI1YMR197C YNL143CP53908 130 aa2.17□□□□□ -2.06
VTI1YMR197C TOF2Q02208 771 aa2.17□□□□□ -2.06
VTI1YMR197C EGD1Q02642 157 aaKnown RBP2.17□□□□□ -2.06
VTI1YMR197C CWC21Q03375 135 aaKnown RBP2.17□□□□□ -2.06
VTI1YMR197C YMR130WQ04223 302 aa2.17□□□□□ -2.06
VTI1YMR197C SSK1Q07084 712 aa2.17□□□□□ -2.06
VTI1YMR197C YFH1Q07540 174 aa2.17□□□□□ -2.06
VTI1YMR197C COS7Q07788 383 aa2.17□□□□□ -2.06
VTI1YMR197C ARG81P05085 880 aa2.16□□□□□ -2.06
VTI1YMR197C PDE2P06776 526 aa2.16□□□□□ -2.06
VTI1YMR197C SPS4P09937 338 aa2.16□□□□□ -2.06
VTI1YMR197C GCD2P12754 651 aaPredicted RBP2.16□□□□□ -2.06
VTI1YMR197C ARO3P14843 370 aaKnown RBP2.16□□□□□ -2.06
VTI1YMR197C KGD1P20967 1014 aaKnown RBP2.16□□□□□ -2.06
VTI1YMR197C UBA1P22515 1024 aaKnown RBP2.16□□□□□ -2.06
VTI1YMR197C RAD14P28519 371 aa2.16□□□□□ -2.06
VTI1YMR197C CRM1P30822 1084 aaKnown RBP2.16□□□□□ -2.06
VTI1YMR197C SNC1P31109 117 aa2.16□□□□□ -2.06
Retrieved 100 of 5,963 RNA–protein pairs in 17.2 ms