RNA–Protein interactions for RNA: YLR442C

SIR3, Transcript of Silencing protein, yeastyeast

Gene SIR3, Length 2,937 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
SIR3YLR442C YLR001CQ07895 862 aa2.39□□□□□ -2.03
SIR3YLR442C NRT1Q08485 598 aa2.39□□□□□ -2.03
SIR3YLR442C THP3Q12049 470 aaKnown RBP2.39□□□□□ -2.03
SIR3YLR442C SWT1Q12104 458 aa2.39□□□□□ -2.03
SIR3YLR442C ATG9Q12142 997 aa2.39□□□□□ -2.03
SIR3YLR442C NCA2Q12374 616 aa2.39□□□□□ -2.03
SIR3YLR442C AUS1Q08409 1394 aa2.39□□□□□ -2.03
SIR3YLR442C QCR7P00128 127 aa2.39□□□□□ -2.03
SIR3YLR442C ATP2P00830 511 aaKnown RBP2.39□□□□□ -2.03
SIR3YLR442C PCK1P10963 549 aa2.39□□□□□ -2.03
SIR3YLR442C REV1P12689 985 aa2.39□□□□□ -2.03
SIR3YLR442C GUK1P15454 187 aaKnown RBP2.39□□□□□ -2.03
SIR3YLR442C RNR3P21672 869 aaKnown RBP2.39□□□□□ -2.03
SIR3YLR442C SIR1P21691 654 aa2.39□□□□□ -2.03
SIR3YLR442C IMG2P25642 146 aaPredicted RBP2.39□□□□□ -2.03
SIR3YLR442C CPR3P25719 182 aa2.39□□□□□ -2.03
SIR3YLR442C ARO4P32449 370 aaKnown RBP2.39□□□□□ -2.03
SIR3YLR442C RML2P32611 393 aa2.39□□□□□ -2.03
SIR3YLR442C DOA1P36037 715 aa2.39□□□□□ -2.03
SIR3YLR442C VBA5P36172 582 aa2.39□□□□□ -2.03
SIR3YLR442C YBR284WP38150 797 aa2.39□□□□□ -2.03
SIR3YLR442C REG2P38232 338 aa2.39□□□□□ -2.03
SIR3YLR442C SBE22P38814 852 aa2.39□□□□□ -2.03
SIR3YLR442C CCT6P39079 546 aa2.39□□□□□ -2.03
SIR3YLR442C AIM2P39721 246 aa2.39□□□□□ -2.03
SIR3YLR442C ECM10P39987 644 aa2.39□□□□□ -2.03
SIR3YLR442C YAT2P40017 923 aa2.39□□□□□ -2.03
SIR3YLR442C BUR6P40096 142 aa2.39□□□□□ -2.03
SIR3YLR442C LTP1P40347 161 aa2.39□□□□□ -2.03
SIR3YLR442C PRM10P42946 383 aa2.39□□□□□ -2.03
SIR3YLR442C YFL054CP43549 646 aa2.39□□□□□ -2.03
SIR3YLR442C RPS7BP48164 190 aaKnown RBP2.39□□□□□ -2.03
SIR3YLR442C ALT2P52892 507 aa2.39□□□□□ -2.03
SIR3YLR442C IMO32P53219 342 aa2.39□□□□□ -2.03
SIR3YLR442C YGR126WP53274 230 aa2.39□□□□□ -2.03
SIR3YLR442C OKP1P53298 406 aa2.39□□□□□ -2.03
SIR3YLR442C RCF2P53721 224 aa2.39□□□□□ -2.03
SIR3YLR442C RPA49Q01080 415 aaPredicted RBP2.39□□□□□ -2.03
SIR3YLR442C AAT1Q01802 451 aa2.39□□□□□ -2.03
SIR3YLR442C YPL113CQ02961 396 aa2.39□□□□□ -2.03
SIR3YLR442C IWR1Q07532 353 aaPredicted RBP2.39□□□□□ -2.03
SIR3YLR442C FMP45Q07651 309 aa2.39□□□□□ -2.03
SIR3YLR442C YOR214CQ12282 236 aa2.39□□□□□ -2.03
SIR3YLR442C LYS2P07702 1392 aa2.38□□□□□ -2.03
SIR3YLR442C CDC28P00546 298 aaKnown RBP2.38□□□□□ -2.03
SIR3YLR442C ADE5,7P07244 802 aaKnown RBP2.38□□□□□ -2.03
SIR3YLR442C STE18P18852 110 aa2.38□□□□□ -2.03
SIR3YLR442C MSS1P32559 526 aaPredicted RBP2.38□□□□□ -2.03
SIR3YLR442C SPR1P32603 445 aa2.38□□□□□ -2.03
SIR3YLR442C SKG6P32900 734 aaPredicted RBP2.38□□□□□ -2.03
SIR3YLR442C RPS1AP33442 255 aaKnown RBP2.38□□□□□ -2.03
SIR3YLR442C TSC10P38342 320 aa2.38□□□□□ -2.03
SIR3YLR442C IMD2P38697 523 aaKnown RBP2.38□□□□□ -2.03
SIR3YLR442C YER010CP40011 234 aa2.38□□□□□ -2.03
SIR3YLR442C PIC2P40035 300 aa2.38□□□□□ -2.03
SIR3YLR442C SNM1P40993 198 aa2.38□□□□□ -2.03
SIR3YLR442C YGR201CP42936 225 aa2.38□□□□□ -2.03
SIR3YLR442C YFL052WP43551 465 aa2.38□□□□□ -2.03
SIR3YLR442C UBP6P43593 499 aaKnown RBP2.38□□□□□ -2.03
SIR3YLR442C GUS1P46655 708 aaKnown RBP RIP-Chip data2.38□□□□□ -2.03not detected
SIR3YLR442C RPE1P46969 238 aa2.38□□□□□ -2.03
SIR3YLR442C RPA34P47006 233 aaPredicted RBP2.38□□□□□ -2.03
SIR3YLR442C YJR149WP47177 404 aa2.38□□□□□ -2.03
SIR3YLR442C RBL2P48606 106 aaKnown RBP2.38□□□□□ -2.03
SIR3YLR442C DUO1P53168 247 aaKnown RBP2.38□□□□□ -2.03
SIR3YLR442C YGR017WP53210 297 aa2.38□□□□□ -2.03
SIR3YLR442C SHY1P53266 389 aa2.38□□□□□ -2.03
SIR3YLR442C YNL040WP53960 456 aaPredicted RBP2.38□□□□□ -2.03
SIR3YLR442C TIM44Q01852 431 aa2.38□□□□□ -2.03
SIR3YLR442C MMT1Q03218 510 aa2.38□□□□□ -2.03
SIR3YLR442C HER2Q03557 464 aa2.38□□□□□ -2.03
SIR3YLR442C YHM2Q04013 314 aa2.38□□□□□ -2.03
SIR3YLR442C FAR8Q05040 523 aa2.38□□□□□ -2.03
SIR3YLR442C YET3Q07451 203 aa2.38□□□□□ -2.03
SIR3YLR442C SHS1Q07657 551 aa2.38□□□□□ -2.03
SIR3YLR442C YEH1Q07804 573 aa2.38□□□□□ -2.03
SIR3YLR442C RFU1Q08003 200 aa2.38□□□□□ -2.03
SIR3YLR442C CRT10Q08226 957 aa2.38□□□□□ -2.03
SIR3YLR442C GET3Q12154 354 aaKnown RBP2.38□□□□□ -2.03
SIR3YLR442C SVS1Q12254 260 aa2.38□□□□□ -2.03
SIR3YLR442C INP53Q12271 1107 aa2.38□□□□□ -2.03
SIR3YLR442C RPS28BP0C0X0 67 aaKnown RBP2.38□□□□□ -2.03
SIR3YLR442C PMR1P13586 950 aa2.38□□□□□ -2.03
SIR3YLR442C NSP1P14907 823 aaKnown RBP2.38□□□□□ -2.03
SIR3YLR442C ZRC1P20107 442 aa2.38□□□□□ -2.03
SIR3YLR442C SAR1P20606 190 aaKnown RBP2.38□□□□□ -2.03
SIR3YLR442C AAT2P23542 418 aaKnown RBP2.38□□□□□ -2.03
SIR3YLR442C PHO3P24031 467 aa2.38□□□□□ -2.03
SIR3YLR442C DBR1P24309 405 aaKnown RBP2.38□□□□□ -2.03
SIR3YLR442C ERG6P25087 383 aaKnown RBP2.38□□□□□ -2.03
SIR3YLR442C CPR4P25334 318 aa2.38□□□□□ -2.03
SIR3YLR442C CHA1P25379 360 aaKnown RBP2.38□□□□□ -2.03
SIR3YLR442C TFC1P32367 649 aa2.38□□□□□ -2.03
SIR3YLR442C RER2P35196 286 aa2.38□□□□□ -2.03
SIR3YLR442C MYO3P36006 1272 aa2.38□□□□□ -2.03
SIR3YLR442C YKL070WP36087 169 aa2.38□□□□□ -2.03
SIR3YLR442C HEL1P36113 551 aa2.38□□□□□ -2.03
SIR3YLR442C SPP381P38282 291 aaPredicted RBP2.38□□□□□ -2.03
SIR3YLR442C DUN1P39009 513 aa2.38□□□□□ -2.03
SIR3YLR442C YMR134WP40207 237 aa2.38□□□□□ -2.03
Retrieved 100 of 5,963 RNA–protein pairs in 18.4 ms