RNA–Protein interactions for RNA: YLR260W

LCB5, Transcript of Minor sphingoid long-chain base kinase, yeastyeast

Gene LCB5, Length 2,064 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
LCB5YLR260W MEI5P32489 222 aa3.51□□□□□ -1.85
LCB5YLR260W MTC7P32633 139 aa3.51□□□□□ -1.85
LCB5YLR260W KES1P35844 434 aaKnown RBP3.51□□□□□ -1.85
LCB5YLR260W CMC1P36064 111 aa3.51□□□□□ -1.85
LCB5YLR260W YKR015CP36111 568 aa3.51□□□□□ -1.85
LCB5YLR260W GDT1P38301 280 aaPredicted RBP3.51□□□□□ -1.85
LCB5YLR260W TDP1P38319 544 aa3.51□□□□□ -1.85
LCB5YLR260W YHL012WP38709 493 aa3.51□□□□□ -1.85
LCB5YLR260W SCC4P40090 624 aa3.51□□□□□ -1.85
LCB5YLR260W ELO3P40319 345 aa3.51□□□□□ -1.85
LCB5YLR260W ALG5P40350 334 aa3.51□□□□□ -1.85
LCB5YLR260W YRB2P40517 327 aa3.51□□□□□ -1.85
LCB5YLR260W TNA1P53322 534 aa3.51□□□□□ -1.85
LCB5YLR260W YMR102CQ03177 834 aa3.51□□□□□ -1.85
LCB5YLR260W YDR239CQ03780 787 aa3.51□□□□□ -1.85
LCB5YLR260W RPC11Q04307 110 aaPredicted RBP3.51□□□□□ -1.85
LCB5YLR260W RBS1Q05672 457 aaKnown RBP3.51□□□□□ -1.85
LCB5YLR260W VPS38Q05919 439 aa3.51□□□□□ -1.85
LCB5YLR260W LOT6Q07923 191 aa3.51□□□□□ -1.85
LCB5YLR260W NUS1Q12063 375 aa3.51□□□□□ -1.85
LCB5YLR260W YOL107WQ12239 342 aa3.51□□□□□ -1.85
LCB5YLR260W TOR2P32600 2474 aaKnown RBP3.51□□□□□ -1.85
LCB5YLR260W SOD2P00447 233 aa3.5□□□□□ -1.85
LCB5YLR260W TUP1P16649 713 aa3.5□□□□□ -1.85
LCB5YLR260W NTH1P32356 751 aa3.5□□□□□ -1.85
LCB5YLR260W RPD3P32561 433 aa3.5□□□□□ -1.85
LCB5YLR260W DSS4P32601 143 aa3.5□□□□□ -1.85
LCB5YLR260W CSG2P35206 410 aa3.5□□□□□ -1.85
LCB5YLR260W MRPL4P36517 319 aa3.5□□□□□ -1.85
LCB5YLR260W MLH1P38920 769 aa3.5□□□□□ -1.85
LCB5YLR260W AVT2P39981 480 aa3.5□□□□□ -1.85
LCB5YLR260W VFA1P40080 203 aa3.5□□□□□ -1.85
LCB5YLR260W CDC1P40986 491 aa3.5□□□□□ -1.85
LCB5YLR260W VPS25P47142 202 aa3.5□□□□□ -1.85
LCB5YLR260W TAF4P50105 388 aa3.5□□□□□ -1.85
LCB5YLR260W YGL036WP53185 909 aaPredicted RBP3.5□□□□□ -1.85
LCB5YLR260W YKR011CQ02209 353 aa3.5□□□□□ -1.85
LCB5YLR260W RSN1Q03516 953 aa3.5□□□□□ -1.85
LCB5YLR260W RPN9Q04062 393 aaKnown RBP3.5□□□□□ -1.85
LCB5YLR260W VAC14Q06708 880 aa3.5□□□□□ -1.85
LCB5YLR260W AIM6Q07716 390 aa3.5□□□□□ -1.85
LCB5YLR260W YLL007CQ07799 665 aa3.5□□□□□ -1.85
LCB5YLR260W DDC1Q08949 612 aa3.5□□□□□ -1.85
LCB5YLR260W SVS1Q12254 260 aa3.5□□□□□ -1.85
LCB5YLR260W GPR1Q12361 961 aa3.5□□□□□ -1.85
LCB5YLR260W MEX67Q99257 599 aaKnown RBP3.5□□□□□ -1.85
LCB5YLR260W ARG81P05085 880 aa3.5□□□□□ -1.85
LCB5YLR260W CDC37P06101 506 aaKnown RBP3.5□□□□□ -1.85
LCB5YLR260W RSR1P13856 272 aa3.5□□□□□ -1.85
LCB5YLR260W MSB1P21339 1137 aaKnown RBP3.5□□□□□ -1.85
LCB5YLR260W YCR061WP25639 631 aa3.5□□□□□ -1.85
LCB5YLR260W HXT3P32466 567 aaKnown RBP3.5□□□□□ -1.85
LCB5YLR260W YME2P32843 850 aa3.5□□□□□ -1.85
LCB5YLR260W MIA40P36046 403 aa3.5□□□□□ -1.85
LCB5YLR260W ADE17P38009 592 aaKnown RBP3.5□□□□□ -1.85
LCB5YLR260W YEL075CP39972 122 aa3.5□□□□□ -1.85
LCB5YLR260W SHQ1P40486 507 aaPredicted RBP3.5□□□□□ -1.85
LCB5YLR260W LSB3P43603 459 aaKnown RBP3.5□□□□□ -1.85
LCB5YLR260W PET130P47065 347 aa3.5□□□□□ -1.85
LCB5YLR260W TAH11P47112 604 aa3.5□□□□□ -1.85
LCB5YLR260W YJR054WP47114 497 aa3.5□□□□□ -1.85
LCB5YLR260W EMC2P47133 292 aaKnown RBP3.5□□□□□ -1.85
LCB5YLR260W ECM27P47144 725 aa3.5□□□□□ -1.85
LCB5YLR260W MRK1P50873 501 aa3.5□□□□□ -1.85
LCB5YLR260W RMD9P53140 646 aaKnown RBP3.5□□□□□ -1.85
LCB5YLR260W PUS2P53167 370 aa3.5□□□□□ -1.85
LCB5YLR260W PET117Q02771 107 aa3.5□□□□□ -1.85
LCB5YLR260W PIR3Q03180 325 aa3.5□□□□□ -1.85
LCB5YLR260W TRS31Q03337 283 aa3.5□□□□□ -1.85
LCB5YLR260W RRN11Q04712 507 aa3.5□□□□□ -1.85
LCB5YLR260W HRD3Q05787 833 aa3.5□□□□□ -1.85
LCB5YLR260W NNT1Q05874 261 aa3.5□□□□□ -1.85
LCB5YLR260W ORM2Q06144 216 aa3.5□□□□□ -1.85
LCB5YLR260W NSE1Q07913 336 aa3.5□□□□□ -1.85
LCB5YLR260W DIS3Q08162 1001 aaKnown RBP3.5□□□□□ -1.85
LCB5YLR260W YPL272CQ08984 517 aa3.5□□□□□ -1.85
LCB5YLR260W MTF1P14908 341 aaKnown RBP3.49□□□□□ -1.85
LCB5YLR260W SEC15P22224 910 aa3.49□□□□□ -1.85
LCB5YLR260W HCM1P25364 564 aa3.49□□□□□ -1.85
LCB5YLR260W APL1P27351 700 aa3.49□□□□□ -1.85
LCB5YLR260W HIR2P32480 875 aa3.49□□□□□ -1.85
LCB5YLR260W TYE7P33122 291 aaPredicted RBP3.49□□□□□ -1.85
LCB5YLR260W YBR139WP38109 508 aa3.49□□□□□ -1.85
LCB5YLR260W SHE3P38272 425 aaKnown RBP3.49□□□□□ -1.85
LCB5YLR260W PEX7P39108 375 aa3.49□□□□□ -1.85
LCB5YLR260W NUP60P39705 539 aa3.49□□□□□ -1.85
LCB5YLR260W YER085CP40058 173 aa3.49□□□□□ -1.85
LCB5YLR260W GUF1P46943 645 aa3.49□□□□□ -1.85
LCB5YLR260W YGL185CP53100 379 aa3.49□□□□□ -1.85
LCB5YLR260W TWF1P53250 332 aa3.49□□□□□ -1.85
LCB5YLR260W DRN1P53255 507 aaKnown RBP3.49□□□□□ -1.85
LCB5YLR260W PRM1P53835 661 aa3.49□□□□□ -1.85
LCB5YLR260W ESBP6P53918 673 aa3.49□□□□□ -1.85
LCB5YLR260W TAF10Q12030 206 aa3.49□□□□□ -1.85
LCB5YLR260W MED4Q12343 284 aa3.49□□□□□ -1.85
LCB5YLR260W LPX1Q12405 387 aaKnown RBP3.49□□□□□ -1.85
LCB5YLR260W SFG1Q12507 346 aa3.49□□□□□ -1.85
LCB5YLR260W MSB2P32334 1306 aa3.49□□□□□ -1.85
LCB5YLR260W YPR089WO13585 888 aa3.48□□□□□ -1.85
LCB5YLR260W SSA3P09435 649 aaKnown RBP3.48□□□□□ -1.85
Retrieved 100 of 5,963 RNA–protein pairs in 68.8 ms