RNA–Protein interactions for RNA: YKL173W

SNU114, Transcript of GTPase component of U5 snRNP involved in mRNA splicing via spliceosome, yeastyeast

Gene SNU114, Length 3,027 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
SNU114YKL173W PUT2P07275 575 aa2.31□□□□□ -2.04
SNU114YKL173W CLN1P20437 546 aa2.31□□□□□ -2.04
SNU114YKL173W RPS2P25443 254 aaKnown RBP2.31□□□□□ -2.04
SNU114YKL173W HIR2P32480 875 aa2.31□□□□□ -2.04
SNU114YKL173W NIP1P32497 812 aaKnown RBP2.31□□□□□ -2.04
SNU114YKL173W TCM62P38228 572 aaKnown RBP2.31□□□□□ -2.04
SNU114YKL173W YDR089WP38966 869 aa2.31□□□□□ -2.04
SNU114YKL173W CCT2P39076 527 aaKnown RBP2.31□□□□□ -2.04
SNU114YKL173W MNP1P53163 194 aaPredicted RBP2.31□□□□□ -2.04
SNU114YKL173W ERG26P53199 349 aaKnown RBP2.31□□□□□ -2.04
SNU114YKL173W HEF3P53978 1044 aaKnown RBP2.31□□□□□ -2.04
SNU114YKL173W SKO1Q02100 647 aa2.31□□□□□ -2.04
SNU114YKL173W TOF2Q02208 771 aa2.31□□□□□ -2.04
SNU114YKL173W RBA50Q04418 439 aa2.31□□□□□ -2.04
SNU114YKL173W SPH1Q06160 661 aa2.31□□□□□ -2.04
SNU114YKL173W URA4P20051 364 aa2.3□□□□□ -2.04
SNU114YKL173W UBA1P22515 1024 aaKnown RBP2.3□□□□□ -2.04
SNU114YKL173W BOS1P25385 244 aa2.3□□□□□ -2.04
SNU114YKL173W MRPL9P31334 269 aa2.3□□□□□ -2.04
SNU114YKL173W DEP1P31385 405 aa2.3□□□□□ -2.04
SNU114YKL173W APD1P38281 316 aa2.3□□□□□ -2.04
SNU114YKL173W YHR210CP38893 341 aa2.3□□□□□ -2.04
SNU114YKL173W ASG1P40467 964 aa2.3□□□□□ -2.04
SNU114YKL173W SYG1P40528 902 aa2.3□□□□□ -2.04
SNU114YKL173W INA22P40576 216 aa2.3□□□□□ -2.04
SNU114YKL173W CUE3P53137 624 aaKnown RBP2.3□□□□□ -2.04
SNU114YKL173W YGR266WP53326 701 aa2.3□□□□□ -2.04
SNU114YKL173W HST1P53685 503 aa2.3□□□□□ -2.04
SNU114YKL173W RSM23Q01163 450 aa2.3□□□□□ -2.04
SNU114YKL173W GFD1Q04839 188 aaKnown RBP2.3□□□□□ -2.04
SNU114YKL173W PHO92Q06390 306 aa2.3□□□□□ -2.04
SNU114YKL173W NDL1Q06568 189 aa2.3□□□□□ -2.04
SNU114YKL173W YOR365CQ08844 703 aa2.3□□□□□ -2.04
SNU114YKL173W VAM3Q12241 283 aa2.3□□□□□ -2.04
SNU114YKL173W YBL111CQ3E7Y5 667 aa2.3□□□□□ -2.04
SNU114YKL173W YML133CQ03099 1374 aa2.3□□□□□ -2.04
SNU114YKL173W YLL067CQ07888 1374 aa2.3□□□□□ -2.04
SNU114YKL173W MER1P16523 270 aa2.3□□□□□ -2.04
SNU114YKL173W SIN4P32259 974 aa2.3□□□□□ -2.04
SNU114YKL173W RPL32P38061 130 aaKnown RBP2.3□□□□□ -2.04
SNU114YKL173W UBA4P38820 440 aa2.3□□□□□ -2.04
SNU114YKL173W TIF4631P39935 952 aaKnown RBP2.3□□□□□ -2.04
SNU114YKL173W LSB1P53281 241 aa2.3□□□□□ -2.04
SNU114YKL173W YMR178WQ03219 274 aaKnown RBP2.3□□□□□ -2.04
SNU114YKL173W MCP2Q06567 569 aa2.3□□□□□ -2.04
SNU114YKL173W RTC5Q12108 567 aaKnown RBP2.3□□□□□ -2.04
SNU114YKL173W HEM1P09950 548 aaPredicted RBP2.29□□□□□ -2.04
SNU114YKL173W PRP21P32524 280 aaPredicted RBP2.29□□□□□ -2.04
SNU114YKL173W RPT5P33297 434 aaKnown RBP2.29□□□□□ -2.04
SNU114YKL173W MIA40P36046 403 aa2.29□□□□□ -2.04
SNU114YKL173W PEX32P38292 413 aa2.29□□□□□ -2.04
SNU114YKL173W YIL060WP40519 144 aa2.29□□□□□ -2.04
SNU114YKL173W CIN1P40987 1014 aa2.29□□□□□ -2.04
SNU114YKL173W BUD32P53323 261 aa2.29□□□□□ -2.04
SNU114YKL173W PPM1Q04081 328 aa2.29□□□□□ -2.04
SNU114YKL173W MSC3Q05812 728 aa2.29□□□□□ -2.04
SNU114YKL173W SNT309Q06091 175 aaPredicted RBP2.29□□□□□ -2.04
SNU114YKL173W ATG26Q06321 1198 aa2.29□□□□□ -2.04
SNU114YKL173W POS5Q06892 414 aa2.29□□□□□ -2.04
SNU114YKL173W YDL057WQ07379 328 aa2.29□□□□□ -2.04
SNU114YKL173W MDY2Q12285 212 aa2.29□□□□□ -2.04
SNU114YKL173W YBT1P32386 1661 aa2.29□□□□□ -2.04
SNU114YKL173W SCH9P11792 824 aaKnown RBP2.29□□□□□ -2.04
SNU114YKL173W RAP1P11938 827 aa2.29□□□□□ -2.04
SNU114YKL173W PPZ1P26570 692 aa2.29□□□□□ -2.04
SNU114YKL173W PHO91P27514 894 aa2.29□□□□□ -2.04
SNU114YKL173W GAC1P28006 793 aa2.29□□□□□ -2.04
SNU114YKL173W RME1P32338 300 aaKnown RBP2.29□□□□□ -2.04
SNU114YKL173W ASF2P32448 525 aaPredicted RBP2.29□□□□□ -2.04
SNU114YKL173W MRPL4P36517 319 aa2.29□□□□□ -2.04
SNU114YKL173W LEU5P38702 357 aa2.29□□□□□ -2.04
SNU114YKL173W YGL138CP53122 345 aa2.29□□□□□ -2.04
SNU114YKL173W YGR127WP53275 312 aa2.29□□□□□ -2.04
SNU114YKL173W SNZ1Q03148 297 aa2.29□□□□□ -2.04
SNU114YKL173W RRB1Q04225 511 aaKnown RBP2.29□□□□□ -2.04
SNU114YKL173W VPS20Q04272 221 aa2.29□□□□□ -2.04
SNU114YKL173W MGR3Q04472 501 aa2.29□□□□□ -2.04
SNU114YKL173W RRP45Q05636 305 aaKnown RBP2.29□□□□□ -2.04
SNU114YKL173W PIG1Q06216 648 aa2.29□□□□□ -2.04
SNU114YKL173W YOR012WQ12351 137 aa2.29□□□□□ -2.04
SNU114YKL173W SNQ2P32568 1501 aaKnown RBP2.29□□□□□ -2.04
SNU114YKL173W SUC2P00724 532 aa2.28□□□□□ -2.04
SNU114YKL173W STE3P06783 470 aa2.28□□□□□ -2.04
SNU114YKL173W TAL1P15019 335 aaKnown RBP2.28□□□□□ -2.04
SNU114YKL173W DED81P38707 554 aaKnown RBP2.28□□□□□ -2.04
SNU114YKL173W GPI16P38875 610 aa2.28□□□□□ -2.04
SNU114YKL173W SPT8P38915 602 aa2.28□□□□□ -2.04
SNU114YKL173W XBP1P40489 647 aa2.28□□□□□ -2.04
SNU114YKL173W MKT1P40850 830 aaKnown RBP2.28□□□□□ -2.04
SNU114YKL173W LOC1P43586 204 aaPredicted RBP2.28□□□□□ -2.04
SNU114YKL173W AIP1P46680 615 aaKnown RBP2.28□□□□□ -2.04
SNU114YKL173W ATP23P53722 227 aa2.28□□□□□ -2.04
SNU114YKL173W IDP3P53982 420 aaKnown RBP2.28□□□□□ -2.04
SNU114YKL173W RRN5Q02983 363 aa2.28□□□□□ -2.04
SNU114YKL173W STE23Q06010 1027 aa2.28□□□□□ -2.04
SNU114YKL173W BUG1Q12191 341 aa2.28□□□□□ -2.04
SNU114YKL173W PKH2Q12236 1081 aaKnown RBP2.28□□□□□ -2.04
SNU114YKL173W HER1Q12276 1246 aa2.28□□□□□ -2.04
SNU114YKL173W ADF1Q2V2Q1 113 aa2.28□□□□□ -2.04
SNU114YKL173W TFB5Q3E7C1 72 aaPredicted RBP2.28□□□□□ -2.04
Retrieved 100 of 5,963 RNA–protein pairs in 19.1 ms