RNA–Protein interactions for RNA: YKL124W

SSH4, Transcript of Specificity factor required for Rsp5p-dependent ubiquitination, yeastyeast

Gene SSH4, Length 1,740 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
SSH4YKL124W BEM4P39011 633 aa4.29□□□□□ -1.72
SSH4YKL124W CEP3P40969 608 aa4.29□□□□□ -1.72
SSH4YKL124W YFR020WP43600 232 aa4.29□□□□□ -1.72
SSH4YKL124W GCV1P48015 400 aa4.29□□□□□ -1.72
SSH4YKL124W YGR015CP53208 328 aa4.29□□□□□ -1.72
SSH4YKL124W CLD1P53264 445 aa4.29□□□□□ -1.72
SSH4YKL124W UBP2Q01476 1272 aa4.29□□□□□ -1.72
SSH4YKL124W YPL071CQ02864 156 aa4.29□□□□□ -1.72
SSH4YKL124W YPL107WQ02873 248 aa4.29□□□□□ -1.72
SSH4YKL124W SIZ1Q04195 904 aa4.29□□□□□ -1.72
SSH4YKL124W YMR034CQ05131 434 aaPredicted RBP4.29□□□□□ -1.72
SSH4YKL124W ATG29Q12092 213 aa4.29□□□□□ -1.72
SSH4YKL124W UPC2Q12151 913 aa4.29□□□□□ -1.72
SSH4YKL124W YOL107WQ12239 342 aa4.29□□□□□ -1.72
SSH4YKL124W RRP42Q12277 265 aaPredicted RBP4.29□□□□□ -1.72
SSH4YKL124W GCN1P33892 2672 aaKnown RBP4.29□□□□□ -1.72
SSH4YKL124W ILV2P07342 687 aaKnown RBP4.29□□□□□ -1.72
SSH4YKL124W PHO81P17442 1178 aa4.29□□□□□ -1.72
SSH4YKL124W PRP6P19735 899 aaPredicted RBP4.29□□□□□ -1.72
SSH4YKL124W FAR1P21268 830 aa4.29□□□□□ -1.72
SSH4YKL124W YCK2P23292 546 aaKnown RBP4.29□□□□□ -1.72
SSH4YKL124W ARE1P25628 610 aa4.29□□□□□ -1.72
SSH4YKL124W YJU2P28320 278 aaPredicted RBP4.29□□□□□ -1.72
SSH4YKL124W SFC1P33303 322 aa4.29□□□□□ -1.72
SSH4YKL124W MIA40P36046 403 aa4.29□□□□□ -1.72
SSH4YKL124W CUE2P36075 443 aaKnown RBP4.29□□□□□ -1.72
SSH4YKL124W MTG2P38860 518 aa4.29□□□□□ -1.72
SSH4YKL124W SPC97P38863 823 aa4.29□□□□□ -1.72
SSH4YKL124W NPT1P39683 429 aaKnown RBP4.29□□□□□ -1.72
SSH4YKL124W YEL068CP39977 110 aa4.29□□□□□ -1.72
SSH4YKL124W SPG5P42933 373 aa4.29□□□□□ -1.72
SSH4YKL124W MET12P46151 657 aa4.29□□□□□ -1.72
SSH4YKL124W YJR149WP47177 404 aa4.29□□□□□ -1.72
SSH4YKL124W ZIP2P53061 704 aa4.29□□□□□ -1.72
SSH4YKL124W ERP6P53198 216 aa4.29□□□□□ -1.72
SSH4YKL124W SHY1P53266 389 aa4.29□□□□□ -1.72
SSH4YKL124W GOT1Q03554 138 aa4.29□□□□□ -1.72
SSH4YKL124W HPT1Q04178 221 aaKnown RBP4.29□□□□□ -1.72
SSH4YKL124W YET3Q07451 203 aa4.29□□□□□ -1.72
SSH4YKL124W BRX1Q08235 291 aaKnown RBP4.29□□□□□ -1.72
SSH4YKL124W IRC13Q08630 104 aa4.29□□□□□ -1.72
SSH4YKL124W GUP2Q08929 609 aa4.29□□□□□ -1.72
SSH4YKL124W RTC5Q12108 567 aaKnown RBP4.29□□□□□ -1.72
SSH4YKL124W SLP1Q12232 587 aa4.29□□□□□ -1.72
SSH4YKL124W PST1Q12355 444 aa4.29□□□□□ -1.72
SSH4YKL124W GPR1Q12361 961 aa4.29□□□□□ -1.72
SSH4YKL124W YMR030W-AQ3E760 96 aa4.29□□□□□ -1.72
SSH4YKL124W MDM12Q92328 271 aa4.29□□□□□ -1.72
SSH4YKL124W RGS2Q99188 309 aa4.29□□□□□ -1.72
SSH4YKL124W CDC9P04819 755 aa4.28□□□□□ -1.72
SSH4YKL124W GAL7P08431 366 aa4.28□□□□□ -1.72
SSH4YKL124W SSC1P0CS90 654 aaKnown RBP4.28□□□□□ -1.72
SSH4YKL124W SEC14P24280 304 aaKnown RBP4.28□□□□□ -1.72
SSH4YKL124W YCR006CP25350 157 aa4.28□□□□□ -1.72
SSH4YKL124W FUN30P31380 1131 aa4.28□□□□□ -1.72
SSH4YKL124W HMX1P32339 317 aa4.28□□□□□ -1.72
SSH4YKL124W AFR1P33304 620 aa4.28□□□□□ -1.72
SSH4YKL124W LOT5P34234 306 aa4.28□□□□□ -1.72
SSH4YKL124W YUH1P35127 236 aa4.28□□□□□ -1.72
SSH4YKL124W FMP46P36141 133 aaKnown RBP4.28□□□□□ -1.72
SSH4YKL124W AMN1P38285 549 aaPredicted RBP4.28□□□□□ -1.72
SSH4YKL124W PLB1P39105 664 aa4.28□□□□□ -1.72
SSH4YKL124W EMP65P40085 556 aa4.28□□□□□ -1.72
SSH4YKL124W SMX2P40204 77 aaKnown RBP4.28□□□□□ -1.72
SSH4YKL124W MET18P40469 1032 aa4.28□□□□□ -1.72
SSH4YKL124W MIC19P43594 170 aa4.28□□□□□ -1.72
SSH4YKL124W ASK10P48361 1146 aa4.28□□□□□ -1.72
SSH4YKL124W MDM34P53083 459 aa4.28□□□□□ -1.72
SSH4YKL124W RCF2P53721 224 aa4.28□□□□□ -1.72
SSH4YKL124W CSL4P53859 292 aaPredicted RBP4.28□□□□□ -1.72
SSH4YKL124W AAT1Q01802 451 aa4.28□□□□□ -1.72
SSH4YKL124W VHS1Q03785 461 aa4.28□□□□□ -1.72
SSH4YKL124W RRP45Q05636 305 aaKnown RBP4.28□□□□□ -1.72
SSH4YKL124W VAM6Q07468 1049 aa4.28□□□□□ -1.72
SSH4YKL124W YOL019WQ08157 551 aa4.28□□□□□ -1.72
SSH4YKL124W MDY2Q12285 212 aa4.28□□□□□ -1.72
SSH4YKL124W NSI1Q12457 570 aa4.28□□□□□ -1.72
SSH4YKL124W YOR019WQ99248 730 aa4.28□□□□□ -1.72
SSH4YKL124W STE3P06783 470 aa4.27□□□□□ -1.73
SSH4YKL124W CDC21P06785 304 aa4.27□□□□□ -1.73
SSH4YKL124W PET494P07390 489 aaPredicted RBP4.27□□□□□ -1.73
SSH4YKL124W KSS1P14681 368 aa4.27□□□□□ -1.73
SSH4YKL124W TYR1P20049 452 aa4.27□□□□□ -1.73
SSH4YKL124W DBP2P24783 546 aaKnown RBP4.27□□□□□ -1.73
SSH4YKL124W VAC17P25591 423 aa4.27□□□□□ -1.73
SSH4YKL124W IMG1P25626 169 aa4.27□□□□□ -1.73
SSH4YKL124W CRM1P30822 1084 aaKnown RBP4.27□□□□□ -1.73
SSH4YKL124W PHA2P32452 334 aa4.27□□□□□ -1.73
SSH4YKL124W MEI5P32489 222 aa4.27□□□□□ -1.73
SSH4YKL124W SRB5P32585 307 aa4.27□□□□□ -1.73
SSH4YKL124W PTM1P32857 523 aa4.27□□□□□ -1.73
SSH4YKL124W SUR1P33300 382 aa4.27□□□□□ -1.73
SSH4YKL124W MDJ1P35191 511 aa4.27□□□□□ -1.73
SSH4YKL124W MRPL15P36523 253 aa4.27□□□□□ -1.73
SSH4YKL124W MCM7P38132 845 aa4.27□□□□□ -1.73
SSH4YKL124W GGC1P38988 300 aa4.27□□□□□ -1.73
SSH4YKL124W STB2P46679 850 aa4.27□□□□□ -1.73
SSH4YKL124W YJR096WP47137 282 aa4.27□□□□□ -1.73
SSH4YKL124W TIS11P47977 285 aa4.27□□□□□ -1.73
SSH4YKL124W PRP31P49704 494 aaPredicted RBP4.27□□□□□ -1.73
Retrieved 100 of 5,963 RNA–protein pairs in 50.5 ms