RNA–Protein interactions for RNA: YJL154C

VPS35, Transcript of Endosomal subunit of membrane-associated retromer complex, yeastyeast

Gene VPS35, Length 2,835 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
VPS35YJL154C RSC1P53236 928 aa2.08□□□□□ -2.08
VPS35YJL154C SLD5Q03406 294 aa2.08□□□□□ -2.08
VPS35YJL154C GYL1Q04322 720 aa2.08□□□□□ -2.08
VPS35YJL154C SOV1Q04748 898 aa2.08□□□□□ -2.08
VPS35YJL154C RBS1Q05672 457 aaKnown RBP2.08□□□□□ -2.08
VPS35YJL154C SRL1Q08673 210 aa2.08□□□□□ -2.08
VPS35YJL154C CFT2Q12102 859 aaPredicted RBP2.08□□□□□ -2.08
VPS35YJL154C NCE102Q12207 173 aaRIP-Chip data2.08□□□□□ -2.08not detected
VPS35YJL154C YAR066WP0CX18 203 aa2.07□□□□□ -2.08
VPS35YJL154C YHR214WP0CX19 203 aa2.07□□□□□ -2.08
VPS35YJL154C RPS2P25443 254 aaKnown RBP2.07□□□□□ -2.08
VPS35YJL154C FUN19P28003 413 aaPredicted RBP2.07□□□□□ -2.08
VPS35YJL154C YIM1P28625 365 aa2.07□□□□□ -2.08
VPS35YJL154C BRF1P29056 596 aa2.07□□□□□ -2.08
VPS35YJL154C PRO3P32263 286 aaKnown RBP2.07□□□□□ -2.08
VPS35YJL154C GYP6P32806 458 aa2.07□□□□□ -2.08
VPS35YJL154C NIP100P33420 868 aa2.07□□□□□ -2.08
VPS35YJL154C SPC34P36131 295 aa2.07□□□□□ -2.08
VPS35YJL154C MLP2P40457 1679 aa2.07□□□□□ -2.08
VPS35YJL154C CAK1P43568 368 aaPredicted RBP2.07□□□□□ -2.08
VPS35YJL154C CRZ1P53968 678 aa2.07□□□□□ -2.08
VPS35YJL154C SKO1Q02100 647 aa2.07□□□□□ -2.08
VPS35YJL154C RBA50Q04418 439 aa2.07□□□□□ -2.08
VPS35YJL154C REX4Q08237 289 aa2.07□□□□□ -2.08
VPS35YJL154C POL1P13382 1468 aa2.07□□□□□ -2.08
VPS35YJL154C YLR278CQ05854 1341 aa2.07□□□□□ -2.08
VPS35YJL154C YFL068WP0CX99 160 aa2.07□□□□□ -2.08
VPS35YJL154C YLL066W-AP0CY00 160 aa2.07□□□□□ -2.08
VPS35YJL154C YLL067W-AP0CY01 160 aa2.07□□□□□ -2.08
VPS35YJL154C PMS1P14242 873 aa2.07□□□□□ -2.08
VPS35YJL154C MDH1P17505 334 aaKnown RBP RIP-Chip data2.07□□□□□ -2.08not detected
VPS35YJL154C GLK1P17709 500 aaKnown RBP2.07□□□□□ -2.08
VPS35YJL154C ATP10P18496 279 aa2.07□□□□□ -2.08
VPS35YJL154C URA4P20051 364 aa2.07□□□□□ -2.08
VPS35YJL154C RPI1P23250 407 aaKnown RBP2.07□□□□□ -2.08
VPS35YJL154C APE2P32454 952 aaKnown RBP2.07□□□□□ -2.08
VPS35YJL154C EFM2P38347 419 aa2.07□□□□□ -2.08
VPS35YJL154C VPS52P39904 641 aa2.07□□□□□ -2.08
VPS35YJL154C BNI5P53890 448 aaKnown RBP2.07□□□□□ -2.08
VPS35YJL154C ERO1Q03103 563 aa2.07□□□□□ -2.08
VPS35YJL154C HOT1Q03213 719 aa2.07□□□□□ -2.08
VPS35YJL154C YMR130WQ04223 302 aa2.07□□□□□ -2.08
VPS35YJL154C DIS3Q08162 1001 aaKnown RBP2.07□□□□□ -2.08
VPS35YJL154C MED2Q12124 431 aa2.07□□□□□ -2.08
VPS35YJL154C YDL009CQ12210 107 aa2.07□□□□□ -2.08
VPS35YJL154C ATP11P32453 318 aa2.06□□□□□ -2.08
VPS35YJL154C RML2P32611 393 aa2.06□□□□□ -2.08
VPS35YJL154C BLI1P35727 113 aa2.06□□□□□ -2.08
VPS35YJL154C ISC1P40015 477 aaKnown RBP2.06□□□□□ -2.08
VPS35YJL154C COS5P47187 383 aa2.06□□□□□ -2.08
VPS35YJL154C YML6P51998 286 aa2.06□□□□□ -2.08
VPS35YJL154C ARX1Q03862 593 aaKnown RBP2.06□□□□□ -2.08
VPS35YJL154C COS7Q07788 383 aa2.06□□□□□ -2.08
VPS35YJL154C MUM3Q08750 479 aa2.06□□□□□ -2.08
VPS35YJL154C VAM3Q12241 283 aa2.06□□□□□ -2.08
VPS35YJL154C CTF3Q12748 733 aa2.06□□□□□ -2.08
VPS35YJL154C HOM3P10869 527 aa2.06□□□□□ -2.08
VPS35YJL154C THI2P38141 450 aa2.06□□□□□ -2.08
VPS35YJL154C SNM1P40993 198 aa2.06□□□□□ -2.08
VPS35YJL154C YIF1P53845 314 aaKnown RBP2.06□□□□□ -2.08
VPS35YJL154C MEH1Q02205 184 aa2.06□□□□□ -2.08
VPS35YJL154C TLG1Q03322 224 aa2.06□□□□□ -2.08
VPS35YJL154C VTH1P40438 1549 aa2.06□□□□□ -2.08
VPS35YJL154C VTH2P40890 1549 aa2.06□□□□□ -2.08
VPS35YJL154C TSC11P40061 1430 aa2.06□□□□□ -2.08
VPS35YJL154C YBT1P32386 1661 aa2.05□□□□□ -2.08
VPS35YJL154C CYB2P00175 591 aa2.05□□□□□ -2.08
VPS35YJL154C BEM1P29366 551 aa2.05□□□□□ -2.08
VPS35YJL154C NDC1P32500 655 aa2.05□□□□□ -2.08
VPS35YJL154C YHR054CP38780 354 aa2.05□□□□□ -2.08
VPS35YJL154C SHO1P40073 367 aa2.05□□□□□ -2.08
VPS35YJL154C TFG2P41896 400 aaPredicted RBP2.05□□□□□ -2.08
VPS35YJL154C YPL068CQ02749 293 aa2.05□□□□□ -2.08
VPS35YJL154C GRX3Q03835 250 aa2.05□□□□□ -2.08
VPS35YJL154C PDE2P06776 526 aa2.05□□□□□ -2.08
VPS35YJL154C SPO7P18410 259 aa2.05□□□□□ -2.08
VPS35YJL154C PPZ1P26570 692 aa2.05□□□□□ -2.08
VPS35YJL154C ERV1P27882 189 aa2.05□□□□□ -2.08
VPS35YJL154C CRM1P30822 1084 aaKnown RBP2.05□□□□□ -2.08
VPS35YJL154C SIP2P34164 415 aaKnown RBP2.05□□□□□ -2.08
VPS35YJL154C FRE2P36033 711 aa2.05□□□□□ -2.08
VPS35YJL154C YER130CP39959 443 aa2.05□□□□□ -2.08
VPS35YJL154C FAU1P40099 211 aa2.05□□□□□ -2.08
VPS35YJL154C ALG8P40351 577 aa2.05□□□□□ -2.08
VPS35YJL154C SYG1P40528 902 aa2.05□□□□□ -2.08
VPS35YJL154C GUF1P46943 645 aa2.05□□□□□ -2.08
VPS35YJL154C PCP1P53259 346 aa2.05□□□□□ -2.08
VPS35YJL154C YGR250CP53316 781 aaKnown RBP2.05□□□□□ -2.08
VPS35YJL154C SLG1P54867 378 aa2.05□□□□□ -2.08
VPS35YJL154C RLI1Q03195 608 aaKnown RBP2.05□□□□□ -2.08
VPS35YJL154C HSP31Q04432 237 aa2.05□□□□□ -2.08
VPS35YJL154C DCS1Q06151 350 aa2.05□□□□□ -2.08
VPS35YJL154C SYO1Q07395 620 aa2.05□□□□□ -2.08
VPS35YJL154C DCI1Q08558 271 aa2.05□□□□□ -2.08
VPS35YJL154C SUC2P00724 532 aa2.04□□□□□ -2.08
VPS35YJL154C HIS4P00815 799 aaKnown RBP2.04□□□□□ -2.08
VPS35YJL154C CPR2P23285 205 aa2.04□□□□□ -2.08
VPS35YJL154C SGV1P23293 657 aaKnown RBP2.04□□□□□ -2.08
VPS35YJL154C BUB3P26449 341 aa2.04□□□□□ -2.08
VPS35YJL154C YJL070CP40361 888 aa2.04□□□□□ -2.08
Retrieved 100 of 5,963 RNA–protein pairs in 21.3 ms