RNA–Protein interactions for RNA: YJL053W

PEP8, Transcript of Vacuolar protein component of the retromer, yeastyeast

Gene PEP8, Length 1,140 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
PEP8YJL053W MPE1P35728 441 aaKnown RBP2.34□□□□□ -2.03
PEP8YJL053W YCR041WP37265 110 aa2.34□□□□□ -2.03
PEP8YJL053W MMS4P38257 691 aa2.34□□□□□ -2.03
PEP8YJL053W KEL1P38853 1164 aaKnown RBP2.34□□□□□ -2.03
PEP8YJL053W YMR147WP40218 223 aaKnown RBP2.34□□□□□ -2.03
PEP8YJL053W VMA13P41807 478 aaKnown RBP2.34□□□□□ -2.03
PEP8YJL053W IDP2P41939 412 aa2.34□□□□□ -2.03
PEP8YJL053W YFL067WP43537 175 aa2.34□□□□□ -2.03
PEP8YJL053W YPI1P43587 155 aa2.34□□□□□ -2.03
PEP8YJL053W COS5P47187 383 aa2.34□□□□□ -2.03
PEP8YJL053W PCP1P53259 346 aa2.34□□□□□ -2.03
PEP8YJL053W BOR1P53838 576 aa2.34□□□□□ -2.03
PEP8YJL053W IBD2P53892 351 aa2.34□□□□□ -2.03
PEP8YJL053W SKO1Q02100 647 aa2.34□□□□□ -2.03
PEP8YJL053W ODC1Q03028 310 aa2.34□□□□□ -2.03
PEP8YJL053W RMT2Q03305 412 aa2.34□□□□□ -2.03
PEP8YJL053W COS7Q07788 383 aa2.34□□□□□ -2.03
PEP8YJL053W REX4Q08237 289 aa2.34□□□□□ -2.03
PEP8YJL053W SGT1Q08446 395 aa2.34□□□□□ -2.03
PEP8YJL053W YPL199CQ08954 240 aa2.34□□□□□ -2.03
PEP8YJL053W MED2Q12124 431 aa2.34□□□□□ -2.03
PEP8YJL053W VAM3Q12241 283 aa2.34□□□□□ -2.03
PEP8YJL053W CTF3Q12748 733 aa2.34□□□□□ -2.03
PEP8YJL053W RPC53P25441 422 aa2.33□□□□□ -2.04
PEP8YJL053W YCR022CP25620 114 aa2.33□□□□□ -2.04
PEP8YJL053W KRE2P27809 442 aa2.33□□□□□ -2.04
PEP8YJL053W PRP21P32524 280 aaPredicted RBP2.33□□□□□ -2.04
PEP8YJL053W GLC7P32598 312 aaKnown RBP2.33□□□□□ -2.04
PEP8YJL053W MRP4P32902 394 aa2.33□□□□□ -2.04
PEP8YJL053W STB6P36085 766 aa2.33□□□□□ -2.04
PEP8YJL053W PIM1P36775 1133 aa2.33□□□□□ -2.04
PEP8YJL053W AVT4P50944 713 aa2.33□□□□□ -2.04
PEP8YJL053W YIP1P53039 248 aa2.33□□□□□ -2.04
PEP8YJL053W YGL242CP53066 181 aa2.33□□□□□ -2.04
PEP8YJL053W MSO1P53604 210 aaKnown RBP2.33□□□□□ -2.04
PEP8YJL053W YDR387CQ04162 555 aa2.33□□□□□ -2.04
PEP8YJL053W YLL056CQ12177 298 aa2.33□□□□□ -2.04
PEP8YJL053W ISA2Q12425 185 aa2.33□□□□□ -2.04
PEP8YJL053W AFI1Q99222 893 aa2.33□□□□□ -2.04
PEP8YJL053W HIP1P06775 603 aa2.32□□□□□ -2.04
PEP8YJL053W ADK2P26364 225 aa2.32□□□□□ -2.04
PEP8YJL053W BEM1P29366 551 aa2.32□□□□□ -2.04
PEP8YJL053W PXA2P34230 853 aa2.32□□□□□ -2.04
PEP8YJL053W NAT2P37293 288 aa2.32□□□□□ -2.04
PEP8YJL053W CCT2P39076 527 aaKnown RBP2.32□□□□□ -2.04
PEP8YJL053W GCD10P41814 478 aa2.32□□□□□ -2.04
PEP8YJL053W RPS0BP46654 252 aaKnown RBP2.32□□□□□ -2.04
PEP8YJL053W WSC2P53832 503 aa2.32□□□□□ -2.04
PEP8YJL053W YIF1P53845 314 aaKnown RBP2.32□□□□□ -2.04
PEP8YJL053W HOT1Q03213 719 aa2.32□□□□□ -2.04
PEP8YJL053W ARX1Q03862 593 aaKnown RBP2.32□□□□□ -2.04
PEP8YJL053W ERB1Q04660 807 aaKnown RBP2.32□□□□□ -2.04
PEP8YJL053W RRN11Q04712 507 aa2.32□□□□□ -2.04
PEP8YJL053W ROY1Q04847 553 aa2.32□□□□□ -2.04
PEP8YJL053W HNT3Q08702 217 aa2.32□□□□□ -2.04
PEP8YJL053W PKH2Q12236 1081 aaKnown RBP2.32□□□□□ -2.04
PEP8YJL053W ARG4P04076 463 aaPredicted RBP2.31□□□□□ -2.04
PEP8YJL053W SPO7P18410 259 aa2.31□□□□□ -2.04
PEP8YJL053W URA4P20051 364 aa2.31□□□□□ -2.04
PEP8YJL053W CLB1P24868 471 aa2.31□□□□□ -2.04
PEP8YJL053W RNA14P25298 677 aaKnown RBP2.31□□□□□ -2.04
PEP8YJL053W RHB1P25378 209 aa2.31□□□□□ -2.04
PEP8YJL053W SPS22P25380 463 aa2.31□□□□□ -2.04
PEP8YJL053W BRF1P29056 596 aa2.31□□□□□ -2.04
PEP8YJL053W SIN4P32259 974 aa2.31□□□□□ -2.04
PEP8YJL053W HIR2P32480 875 aa2.31□□□□□ -2.04
PEP8YJL053W SRP72P38688 640 aaKnown RBP2.31□□□□□ -2.04
PEP8YJL053W MTC6P38849 526 aa2.31□□□□□ -2.04
PEP8YJL053W LAM5P43560 674 aa2.31□□□□□ -2.04
PEP8YJL053W CAK1P43568 368 aaPredicted RBP2.31□□□□□ -2.04
PEP8YJL053W TRS85P46944 698 aa2.31□□□□□ -2.04
PEP8YJL053W YJR011CP47086 261 aaPredicted RBP2.31□□□□□ -2.04
PEP8YJL053W YGR250CP53316 781 aaKnown RBP2.31□□□□□ -2.04
PEP8YJL053W ARK1P53974 638 aa2.31□□□□□ -2.04
PEP8YJL053W YMR130WQ04223 302 aa2.31□□□□□ -2.04
PEP8YJL053W TIM18Q08749 192 aa2.31□□□□□ -2.04
PEP8YJL053W RRD2Q12461 358 aa2.31□□□□□ -2.04
PEP8YJL053W YCL021W-AQ96VH3 125 aa2.31□□□□□ -2.04
PEP8YJL053W HHF1P02309 103 aaKnown RBP2.3□□□□□ -2.04
PEP8YJL053W SCEIP03882 235 aa2.3□□□□□ -2.04
PEP8YJL053W SAM1P10659 382 aaKnown RBP2.3□□□□□ -2.04
PEP8YJL053W PMR1P13586 950 aa2.3□□□□□ -2.04
PEP8YJL053W HEM15P16622 393 aa2.3□□□□□ -2.04
PEP8YJL053W SAM2P19358 384 aaKnown RBP2.3□□□□□ -2.04
PEP8YJL053W CLN1P20437 546 aa2.3□□□□□ -2.04
PEP8YJL053W TIP1P27654 210 aaPredicted RBP2.3□□□□□ -2.04
PEP8YJL053W APE3P37302 537 aaKnown RBP2.3□□□□□ -2.04
PEP8YJL053W TIF5P38431 405 aaKnown RBP2.3□□□□□ -2.04
PEP8YJL053W LYS1P38998 373 aaRIP-Chip data2.3□□□□□ -2.04not detected
PEP8YJL053W MST28P39552 234 aa2.3□□□□□ -2.04
PEP8YJL053W SAS2P40963 338 aa2.3□□□□□ -2.04
PEP8YJL053W RRT5P43607 289 aa2.3□□□□□ -2.04
PEP8YJL053W HMS2P47175 358 aa2.3□□□□□ -2.04
PEP8YJL053W MDG1P53885 366 aa2.3□□□□□ -2.04
PEP8YJL053W BNI5P53890 448 aaKnown RBP2.3□□□□□ -2.04
PEP8YJL053W HEL2Q05580 639 aaKnown RBP2.3□□□□□ -2.04
PEP8YJL053W DCS1Q06151 350 aa2.3□□□□□ -2.04
PEP8YJL053W DIS3Q08162 1001 aaKnown RBP2.3□□□□□ -2.04
PEP8YJL053W ESA1Q08649 445 aa2.3□□□□□ -2.04
PEP8YJL053W RKM1Q08961 583 aaPredicted RBP2.3□□□□□ -2.04
Retrieved 100 of 5,963 RNA–protein pairs in 47.8 ms