RNA–Protein interactions for RNA: YJL047C

RTT101, Transcript of Cullin subunit of a Roc1p-dependent E3 ubiquitin ligase complex, yeastyeast

Gene RTT101, Length 2,529 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
RTT101YJL047C RTC4P53850 401 aa1.96□□□□□ -2.09
RTT101YJL047C ROT1Q03691 256 aa1.96□□□□□ -2.09
RTT101YJL047C TAF12Q03761 539 aa1.96□□□□□ -2.09
RTT101YJL047C ECM30Q06673 1274 aa1.96□□□□□ -2.09
RTT101YJL047C AFT2Q08957 416 aa1.96□□□□□ -2.09
RTT101YJL047C MLH3Q12083 715 aa1.96□□□□□ -2.09
RTT101YJL047C LPX1Q12405 387 aaKnown RBP1.96□□□□□ -2.09
RTT101YJL047C SRN2Q99176 213 aa1.96□□□□□ -2.09
RTT101YJL047C YPT1P01123 206 aaKnown RBP1.96□□□□□ -2.1
RTT101YJL047C ADE4P04046 510 aaKnown RBP1.96□□□□□ -2.1
RTT101YJL047C ARG4P04076 463 aaPredicted RBP1.96□□□□□ -2.1
RTT101YJL047C MSF1P08425 469 aa1.96□□□□□ -2.1
RTT101YJL047C MATALPHA1P0CY06 175 aa1.96□□□□□ -2.1
RTT101YJL047C HMLALPHA1P0CY07 175 aa1.96□□□□□ -2.1
RTT101YJL047C ERG11P10614 530 aa1.96□□□□□ -2.1
RTT101YJL047C YPK2P18961 677 aa1.96□□□□□ -2.1
RTT101YJL047C KGD2P19262 463 aaPredicted RBP1.96□□□□□ -2.1
RTT101YJL047C SGV1P23293 657 aaKnown RBP1.96□□□□□ -2.1
RTT101YJL047C STE11P23561 717 aa1.96□□□□□ -2.1
RTT101YJL047C RHB1P25378 209 aa1.96□□□□□ -2.1
RTT101YJL047C ITR1P30605 584 aa1.96□□□□□ -2.1
RTT101YJL047C SIN4P32259 974 aa1.96□□□□□ -2.1
RTT101YJL047C GDA1P32621 518 aa1.96□□□□□ -2.1
RTT101YJL047C OCT1P35999 772 aa1.96□□□□□ -2.1
RTT101YJL047C RPL32P38061 130 aaKnown RBP1.96□□□□□ -2.1
RTT101YJL047C DUG2P38149 878 aa1.96□□□□□ -2.1
RTT101YJL047C RIX1P38883 763 aaPredicted RBP1.96□□□□□ -2.1
RTT101YJL047C UTP18P40362 594 aaPredicted RBP1.96□□□□□ -2.1
RTT101YJL047C CDC40P40968 455 aaPredicted RBP1.96□□□□□ -2.1
RTT101YJL047C PTR3P43606 678 aa1.96□□□□□ -2.1
RTT101YJL047C RMR1P53060 241 aa1.96□□□□□ -2.1
RTT101YJL047C YIP4P53093 235 aa1.96□□□□□ -2.1
RTT101YJL047C BUD17P53727 317 aa1.96□□□□□ -2.1
RTT101YJL047C YMR178WQ03219 274 aaKnown RBP1.96□□□□□ -2.1
RTT101YJL047C YMR187CQ03236 431 aa1.96□□□□□ -2.1
RTT101YJL047C MYO5Q04439 1219 aaKnown RBP1.96□□□□□ -2.1
RTT101YJL047C APC4Q04601 652 aa1.96□□□□□ -2.1
RTT101YJL047C GPN3Q06543 272 aa1.96□□□□□ -2.1
RTT101YJL047C ARR2Q06597 130 aa1.96□□□□□ -2.1
RTT101YJL047C MRPL35Q06678 367 aa1.96□□□□□ -2.1
RTT101YJL047C LCB4Q12246 624 aa1.96□□□□□ -2.1
RTT101YJL047C AIM45Q12480 344 aaKnown RBP1.96□□□□□ -2.1
RTT101YJL047C YBL111CQ3E7Y5 667 aa1.96□□□□□ -2.1
RTT101YJL047C TDH3P00359 332 aaKnown RBP RIP-Chip data1.95□□□□□ -2.1not detected
RTT101YJL047C PMA1P05030 918 aaKnown RBP1.95□□□□□ -2.1
RTT101YJL047C GPH1P06738 902 aaKnown RBP1.95□□□□□ -2.1
RTT101YJL047C PEP4P07267 405 aaKnown RBP1.95□□□□□ -2.1
RTT101YJL047C MAS1P10507 462 aa1.95□□□□□ -2.1
RTT101YJL047C PEP5P12868 1029 aa1.95□□□□□ -2.1
RTT101YJL047C KSS1P14681 368 aa1.95□□□□□ -2.1
RTT101YJL047C YCR016WP25617 290 aaKnown RBP1.95□□□□□ -2.1
RTT101YJL047C NRP1P32770 719 aaKnown RBP RIP-Chip data1.95□□□□□ -2.1not detected
RTT101YJL047C SOF1P33750 489 aaKnown RBP1.95□□□□□ -2.1
RTT101YJL047C SOR1P35497 357 aaKnown RBP1.95□□□□□ -2.1
RTT101YJL047C KDX1P36005 433 aa1.95□□□□□ -2.1
RTT101YJL047C CTP1P38152 299 aa1.95□□□□□ -2.1
RTT101YJL047C YBR053CP38235 358 aa1.95□□□□□ -2.1
RTT101YJL047C ICS2P38284 255 aa1.95□□□□□ -2.1
RTT101YJL047C TSC10P38342 320 aa1.95□□□□□ -2.1
RTT101YJL047C ANS1P38832 159 aa1.95□□□□□ -2.1
RTT101YJL047C FET3P38993 636 aa1.95□□□□□ -2.1
RTT101YJL047C PLB1P39105 664 aa1.95□□□□□ -2.1
RTT101YJL047C YER130CP39959 443 aa1.95□□□□□ -2.1
RTT101YJL047C FMC1P40491 155 aa1.95□□□□□ -2.1
RTT101YJL047C SPG5P42933 373 aa1.95□□□□□ -2.1
RTT101YJL047C HAM1P47119 197 aaKnown RBP1.95□□□□□ -2.1
RTT101YJL047C DRN1P53255 507 aaKnown RBP1.95□□□□□ -2.1
RTT101YJL047C YNL247WP53852 767 aaKnown RBP1.95□□□□□ -2.1
RTT101YJL047C SLT2Q00772 484 aa1.95□□□□□ -2.1
RTT101YJL047C ENT5Q03769 411 aaKnown RBP1.95□□□□□ -2.1
RTT101YJL047C SOR2Q07786 357 aa1.95□□□□□ -2.1
RTT101YJL047C RDR1Q08904 546 aa1.95□□□□□ -2.1
RTT101YJL047C NCE102Q12207 173 aaRIP-Chip data1.95□□□□□ -2.1not detected
RTT101YJL047C YOR029WQ12243 111 aa1.95□□□□□ -2.1
RTT101YJL047C LAS17Q12446 633 aa1.95□□□□□ -2.1
RTT101YJL047C TDH2P00358 332 aaKnown RBP1.95□□□□□ -2.1
RTT101YJL047C AI3P03877 415 aa1.95□□□□□ -2.1
RTT101YJL047C CHO1P08456 276 aa1.95□□□□□ -2.1
RTT101YJL047C THR4P16120 514 aaKnown RBP1.95□□□□□ -2.1
RTT101YJL047C ATP10P18496 279 aa1.95□□□□□ -2.1
RTT101YJL047C OSM1P21375 501 aaKnown RBP1.95□□□□□ -2.1
RTT101YJL047C CNA1P23287 553 aa1.95□□□□□ -2.1
RTT101YJL047C GPI12P23797 304 aa1.95□□□□□ -2.1
RTT101YJL047C YCP4P25349 247 aaKnown RBP1.95□□□□□ -2.1
RTT101YJL047C KAR4P25583 335 aa1.95□□□□□ -2.1
RTT101YJL047C FUB1P25659 250 aa1.95□□□□□ -2.1
RTT101YJL047C DEG1P31115 442 aaKnown RBP1.95□□□□□ -2.1
RTT101YJL047C PRO3P32263 286 aaKnown RBP1.95□□□□□ -2.1
RTT101YJL047C MEI5P32489 222 aa1.95□□□□□ -2.1
RTT101YJL047C CYM1P32898 989 aa1.95□□□□□ -2.1
RTT101YJL047C LHS1P36016 881 aa1.95□□□□□ -2.1
RTT101YJL047C VHC1P38329 1120 aa1.95□□□□□ -2.1
RTT101YJL047C YHR122WP38829 231 aa1.95□□□□□ -2.1
RTT101YJL047C PET100P38958 111 aa1.95□□□□□ -2.1
RTT101YJL047C PRP39P39682 629 aaKnown RBP1.95□□□□□ -2.1
RTT101YJL047C SAP1P39955 897 aaKnown RBP1.95□□□□□ -2.1
RTT101YJL047C RPN11P43588 306 aaKnown RBP1.95□□□□□ -2.1
RTT101YJL047C MUP1P50276 574 aa1.95□□□□□ -2.1
RTT101YJL047C PMT5P52867 743 aa1.95□□□□□ -2.1
RTT101YJL047C YGR127WP53275 312 aa1.95□□□□□ -2.1
Retrieved 100 of 5,963 RNA–protein pairs in 7.4 ms