RNA–Protein interactions for RNA: YFR049W

YMR31, Transcript of Mitochondrial ribosomal protein of the small subunit, yeast

Gene YMR31, Length 372 nt, Biotype protein coding.

RNA		Protein				Prediction (catRAPID)		Interaction (RIP-Chip)
Gene	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	Detected Interaction
YMR31	YFR049W	YDR541C	Q03049	344 aa		2.54	□□□□□ -2
YMR31	YFR049W	ABZ2	Q03266	374 aa		2.54	□□□□□ -2
YMR31	YFR049W	IZH1	Q03419	316 aa		2.54	□□□□□ -2
YMR31	YFR049W	EKI1	Q03764	534 aa		2.54	□□□□□ -2
YMR31	YFR049W	MGR3	Q04472	501 aa		2.54	□□□□□ -2
YMR31	YFR049W	FRE7	Q12333	620 aa		2.54	□□□□□ -2
YMR31	YFR049W	RRD2	Q12461	358 aa		2.54	□□□□□ -2
YMR31	YFR049W	PFK27	Q12471	397 aa	Predicted RBP	2.54	□□□□□ -2
YMR31	YFR049W	SUC2	P00724	532 aa		2.53	□□□□□ -2
YMR31	YFR049W	ADE4	P04046	510 aa	Known RBP	2.53	□□□□□ -2
YMR31	YFR049W	NFT1	P0CE68	1218 aa		2.53	□□□□□ -2
YMR31	YFR049W	HOM2	P13663	365 aa	Known RBP	2.53	□□□□□ -2
YMR31	YFR049W	DAL80	P26343	269 aa		2.53	□□□□□ -2
YMR31	YFR049W	HSP104	P31539	908 aa	Known RBP	2.53	□□□□□ -2
YMR31	YFR049W	NDI1	P32340	513 aa		2.53	□□□□□ -2
YMR31	YFR049W	CYS4	P32582	507 aa	Known RBP	2.53	□□□□□ -2
YMR31	YFR049W	NRP1	P32770	719 aa	Known RBP RIP-Chip data	2.53	□□□□□ -2	not detected
YMR31	YFR049W	PPQ1	P32945	549 aa		2.53	□□□□□ -2
YMR31	YFR049W	PTK1	P36002	662 aa	Predicted RBP	2.53	□□□□□ -2
YMR31	YFR049W	PHD1	P36093	366 aa		2.53	□□□□□ -2
YMR31	YFR049W	PCH2	P38126	564 aa		2.53	□□□□□ -2
YMR31	YFR049W	YBL028C	P38202	106 aa		2.53	□□□□□ -2
YMR31	YFR049W	SPP381	P38282	291 aa	Predicted RBP	2.53	□□□□□ -2
YMR31	YFR049W	ERG7	P38604	731 aa		2.53	□□□□□ -2
YMR31	YFR049W	RFC3	P38629	340 aa		2.53	□□□□□ -2
YMR31	YFR049W	GPI16	P38875	610 aa		2.53	□□□□□ -2
YMR31	YFR049W	ISC1	P40015	477 aa	Known RBP	2.53	□□□□□ -2
YMR31	YFR049W	ELP2	P42935	788 aa		2.53	□□□□□ -2
YMR31	YFR049W	GAT1	P43574	510 aa		2.53	□□□□□ -2
YMR31	YFR049W	TRS85	P46944	698 aa		2.53	□□□□□ -2
YMR31	YFR049W	PHO86	P46956	311 aa		2.53	□□□□□ -2
YMR31	YFR049W	CAC2	Q04199	468 aa		2.53	□□□□□ -2
YMR31	YFR049W	MRPL1	Q04599	285 aa		2.53	□□□□□ -2
YMR31	YFR049W	RRP9	Q06506	573 aa	Known RBP	2.53	□□□□□ -2
YMR31	YFR049W	NDL1	Q06568	189 aa		2.53	□□□□□ -2
YMR31	YFR049W	REX4	Q08237	289 aa		2.53	□□□□□ -2
YMR31	YFR049W	OSW1	Q08692	278 aa		2.53	□□□□□ -2
YMR31	YFR049W	YLL056C	Q12177	298 aa		2.53	□□□□□ -2
YMR31	YFR049W	BUG1	Q12191	341 aa		2.53	□□□□□ -2
YMR31	YFR049W	RKM5	Q12367	367 aa		2.53	□□□□□ -2
YMR31	YFR049W	SRN2	Q99176	213 aa		2.53	□□□□□ -2
YMR31	YFR049W	GAL7	P08431	366 aa		2.52	□□□□□ -2.01
YMR31	YFR049W	TUB1	P09733	447 aa	Known RBP	2.52	□□□□□ -2.01
YMR31	YFR049W	GID7	P25569	745 aa		2.52	□□□□□ -2.01
YMR31	YFR049W	MGR1	P25573	417 aa		2.52	□□□□□ -2.01
YMR31	YFR049W	NIP1	P32497	812 aa	Known RBP	2.52	□□□□□ -2.01
YMR31	YFR049W	RAD24	P32641	659 aa		2.52	□□□□□ -2.01
YMR31	YFR049W	YSC83	P32792	385 aa		2.52	□□□□□ -2.01
YMR31	YFR049W	RIB7	P33312	244 aa		2.52	□□□□□ -2.01
YMR31	YFR049W	RSM22	P36056	628 aa		2.52	□□□□□ -2.01
YMR31	YFR049W	QDR3	P38227	689 aa		2.52	□□□□□ -2.01
YMR31	YFR049W	MSG5	P38590	489 aa		2.52	□□□□□ -2.01
YMR31	YFR049W	INM1	P38710	295 aa		2.52	□□□□□ -2.01
YMR31	YFR049W	STN1	P38960	494 aa		2.52	□□□□□ -2.01
YMR31	YFR049W	YDR089W	P38966	869 aa		2.52	□□□□□ -2.01
YMR31	YFR049W	YER079W	P40052	210 aa	Known RBP	2.52	□□□□□ -2.01
YMR31	YFR049W	FAU1	P40099	211 aa		2.52	□□□□□ -2.01
YMR31	YFR049W	GAT2	P40209	560 aa		2.52	□□□□□ -2.01
YMR31	YFR049W	QRI1	P43123	477 aa	Known RBP	2.52	□□□□□ -2.01
YMR31	YFR049W	SCD6	P45978	349 aa	Known RBP RIP-Chip data	2.52	□□□□□ -2.01	not detected
YMR31	YFR049W	EFM3	P47163	339 aa		2.52	□□□□□ -2.01
YMR31	YFR049W	HMS2	P47175	358 aa		2.52	□□□□□ -2.01
YMR31	YFR049W	BRO1	P48582	844 aa		2.52	□□□□□ -2.01
YMR31	YFR049W	PHB2	P50085	310 aa		2.52	□□□□□ -2.01
YMR31	YFR049W	YGL082W	P53155	381 aa		2.52	□□□□□ -2.01
YMR31	YFR049W	MPS2	P53159	387 aa		2.52	□□□□□ -2.01
YMR31	YFR049W	ERG13	P54839	491 aa	Known RBP	2.52	□□□□□ -2.01
YMR31	YFR049W	LAP3	Q01532	483 aa	Known RBP RIP-Chip data	2.52	□□□□□ -2.01	not detected
YMR31	YFR049W	UTP6	Q02354	440 aa	Known RBP	2.52	□□□□□ -2.01
YMR31	YFR049W	GIP3	Q03016	1276 aa		2.52	□□□□□ -2.01
YMR31	YFR049W	RSC9	Q03124	581 aa		2.52	□□□□□ -2.01
YMR31	YFR049W	SLD5	Q03406	294 aa		2.52	□□□□□ -2.01
YMR31	YFR049W	YDR415C	Q04033	374 aa	Predicted RBP	2.52	□□□□□ -2.01
YMR31	YFR049W	SMA2	Q04658	369 aa		2.52	□□□□□ -2.01
YMR31	YFR049W	IPK1	Q06667	281 aa		2.52	□□□□□ -2.01
YMR31	YFR049W	INO80	P53115	1489 aa		2.52	□□□□□ -2.01
YMR31	YFR049W	BNR1	P40450	1375 aa		2.51	□□□□□ -2.01
YMR31	YFR049W	HIS4	P00815	799 aa	Known RBP	2.51	□□□□□ -2.01
YMR31	YFR049W	DST1	P07273	309 aa		2.51	□□□□□ -2.01
YMR31	YFR049W	CHS1	P08004	1131 aa		2.51	□□□□□ -2.01
YMR31	YFR049W	RPL42A	P0CX27	106 aa	Known RBP	2.51	□□□□□ -2.01
YMR31	YFR049W	RPL42B	P0CX28	106 aa	Known RBP	2.51	□□□□□ -2.01
YMR31	YFR049W	EXO70	P19658	623 aa		2.51	□□□□□ -2.01
YMR31	YFR049W	YAP1	P19880	650 aa	Known RBP	2.51	□□□□□ -2.01
YMR31	YFR049W	SAG1	P20840	650 aa		2.51	□□□□□ -2.01
YMR31	YFR049W	SEC62	P21825	274 aa		2.51	□□□□□ -2.01
YMR31	YFR049W	RAD57	P25301	460 aa		2.51	□□□□□ -2.01
YMR31	YFR049W	RDS1	P25611	832 aa		2.51	□□□□□ -2.01
YMR31	YFR049W	BUB3	P26449	341 aa		2.51	□□□□□ -2.01
YMR31	YFR049W	SMY1	P32364	656 aa	Known RBP	2.51	□□□□□ -2.01
YMR31	YFR049W	FRE1	P32791	686 aa		2.51	□□□□□ -2.01
YMR31	YFR049W	YNK1	P36010	153 aa	Known RBP	2.51	□□□□□ -2.01
YMR31	YFR049W	YPK3	P38070	525 aa		2.51	□□□□□ -2.01
YMR31	YFR049W	LEU5	P38702	357 aa		2.51	□□□□□ -2.01
YMR31	YFR049W	OSH3	P38713	996 aa	Known RBP	2.51	□□□□□ -2.01
YMR31	YFR049W	YIL024C	P40543	189 aa		2.51	□□□□□ -2.01
YMR31	YFR049W	SNL1	P40548	159 aa		2.51	□□□□□ -2.01
YMR31	YFR049W	RTS2	P40962	232 aa		2.51	□□□□□ -2.01
YMR31	YFR049W	YFR018C	P43599	363 aa		2.51	□□□□□ -2.01
YMR31	YFR049W	YHC3	P47040	408 aa		2.51	□□□□□ -2.01

Retrieved 100 of 5,963 RNA–protein pairs in 20 ms