RNA–Protein interactions for RNA: YDR073W

SNF11, Transcript of Subunit of the SWI/SNF chromatin remodeling complex, yeast

Gene SNF11, Length 510 nt, Biotype protein coding.

RNA		Protein				Prediction (catRAPID)		Interaction (RIP-Chip)
Gene	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	Detected Interaction
SNF11	YDR073W	ATP3	P38077	311 aa	Known RBP	5.43	□□□□□ -1.54
SNF11	YDR073W	LAG1	P38703	411 aa		5.43	□□□□□ -1.54
SNF11	YDR073W	ARN1	P38731	627 aa		5.43	□□□□□ -1.54
SNF11	YDR073W	RRP4	P38792	359 aa	Known RBP	5.43	□□□□□ -1.54
SNF11	YDR073W	LIN1	P38852	340 aa	Predicted RBP	5.43	□□□□□ -1.54
SNF11	YDR073W	YMR124W	P39523	943 aa	Known RBP	5.43	□□□□□ -1.54
SNF11	YDR073W	GAT2	P40209	560 aa		5.43	□□□□□ -1.54
SNF11	YDR073W	SDS3	P40505	327 aa		5.43	□□□□□ -1.54
SNF11	YDR073W	SYG1	P40528	902 aa		5.43	□□□□□ -1.54
SNF11	YDR073W	AGX1	P43567	385 aa		5.43	□□□□□ -1.54
SNF11	YDR073W	YJR011C	P47086	261 aa	Predicted RBP	5.43	□□□□□ -1.54
SNF11	YDR073W	UBP8	P50102	471 aa		5.43	□□□□□ -1.54
SNF11	YDR073W	NUP84	P52891	726 aa		5.43	□□□□□ -1.54
SNF11	YDR073W	DRN1	P53255	507 aa	Known RBP	5.43	□□□□□ -1.54
SNF11	YDR073W	DSL1	P53847	754 aa		5.43	□□□□□ -1.54
SNF11	YDR073W	PIG1	Q06216	648 aa		5.43	□□□□□ -1.54
SNF11	YDR073W	NSE1	Q07913	336 aa		5.43	□□□□□ -1.54
SNF11	YDR073W	BUG1	Q12191	341 aa		5.43	□□□□□ -1.54
SNF11	YDR073W	RDL1	Q12305	139 aa	Known RBP	5.43	□□□□□ -1.54
SNF11	YDR073W	MES1	P00958	751 aa	Known RBP	5.42	□□□□□ -1.54
SNF11	YDR073W	CDC21	P06785	304 aa		5.42	□□□□□ -1.54
SNF11	YDR073W	RNR2	P09938	399 aa	Known RBP	5.42	□□□□□ -1.54
SNF11	YDR073W	SEC63	P14906	663 aa		5.42	□□□□□ -1.54
SNF11	YDR073W	FUN19	P28003	413 aa	Predicted RBP	5.42	□□□□□ -1.54
SNF11	YDR073W	YMC1	P32331	307 aa		5.42	□□□□□ -1.54
SNF11	YDR073W	QDR3	P38227	689 aa		5.42	□□□□□ -1.54
SNF11	YDR073W	SPP381	P38282	291 aa	Predicted RBP	5.42	□□□□□ -1.54
SNF11	YDR073W	RFC3	P38629	340 aa		5.42	□□□□□ -1.54
SNF11	YDR073W	TOM71	P38825	639 aa	Known RBP	5.42	□□□□□ -1.54
SNF11	YDR073W	PAC11	P40960	533 aa		5.42	□□□□□ -1.54
SNF11	YDR073W	YJR154W	P47181	346 aa		5.42	□□□□□ -1.54
SNF11	YDR073W	STB4	P50104	949 aa		5.42	□□□□□ -1.54
SNF11	YDR073W	SWF1	Q04629	336 aa		5.42	□□□□□ -1.54
SNF11	YDR073W	KAP95	Q06142	861 aa	Known RBP	5.42	□□□□□ -1.54
SNF11	YDR073W	CUR1	Q06469	252 aa		5.42	□□□□□ -1.54
SNF11	YDR073W	STE2	D6VTK4	431 aa		5.41	□□□□□ -1.54
SNF11	YDR073W	RPI1	P23250	407 aa	Known RBP	5.41	□□□□□ -1.54
SNF11	YDR073W	PSO2	P30620	661 aa		5.41	□□□□□ -1.54
SNF11	YDR073W	YSC83	P32792	385 aa		5.41	□□□□□ -1.54
SNF11	YDR073W	APD1	P38281	316 aa		5.41	□□□□□ -1.54
SNF11	YDR073W	END3	P39013	349 aa		5.41	□□□□□ -1.54
SNF11	YDR073W	CCT2	P39076	527 aa	Known RBP	5.41	□□□□□ -1.54
SNF11	YDR073W	SAS2	P40963	338 aa		5.41	□□□□□ -1.54
SNF11	YDR073W	PHO86	P46956	311 aa		5.41	□□□□□ -1.54
SNF11	YDR073W	TAX4	P47030	604 aa		5.41	□□□□□ -1.54
SNF11	YDR073W	BRO1	P48582	844 aa		5.41	□□□□□ -1.54
SNF11	YDR073W	ECM18	Q04623	453 aa		5.41	□□□□□ -1.54
SNF11	YDR073W	YDL218W	Q07629	317 aa		5.41	□□□□□ -1.54
SNF11	YDR073W	PEX27	Q08580	376 aa		5.41	□□□□□ -1.54
SNF11	YDR073W	BAR1	P12630	587 aa		5.4	□□□□□ -1.54
SNF11	YDR073W	THR4	P16120	514 aa	Known RBP	5.4	□□□□□ -1.54
SNF11	YDR073W	CYS4	P32582	507 aa	Known RBP	5.4	□□□□□ -1.54
SNF11	YDR073W	INM1	P38710	295 aa		5.4	□□□□□ -1.54
SNF11	YDR073W	UBP5	P39944	805 aa		5.4	□□□□□ -1.54
SNF11	YDR073W	AIM20	P40451	204 aa		5.4	□□□□□ -1.54
SNF11	YDR073W	SOL4	P53315	255 aa		5.4	□□□□□ -1.54
SNF11	YDR073W	YIF1	P53845	314 aa	Known RBP	5.4	□□□□□ -1.54
SNF11	YDR073W	YPL014W	Q02606	381 aa		5.4	□□□□□ -1.54
SNF11	YDR073W	CWC21	Q03375	135 aa	Known RBP	5.4	□□□□□ -1.54
SNF11	YDR073W	ARP10	Q04549	284 aa		5.4	□□□□□ -1.54
SNF11	YDR073W	YMR310C	Q04867	317 aa	Predicted RBP	5.4	□□□□□ -1.54
SNF11	YDR073W	MCP2	Q06567	569 aa		5.4	□□□□□ -1.54
SNF11	YDR073W	SSK1	Q07084	712 aa		5.4	□□□□□ -1.54
SNF11	YDR073W	RRT8	Q08219	342 aa		5.4	□□□□□ -1.54
SNF11	YDR073W	RPN13	O13563	156 aa		5.39	□□□□□ -1.55
SNF11	YDR073W	SUP35	P05453	685 aa	Known RBP	5.39	□□□□□ -1.55
SNF11	YDR073W	MAS1	P10507	462 aa		5.39	□□□□□ -1.55
SNF11	YDR073W	GAL3	P13045	520 aa		5.39	□□□□□ -1.55
SNF11	YDR073W	APE2	P32454	952 aa	Known RBP	5.39	□□□□□ -1.55
SNF11	YDR073W	YBR139W	P38109	508 aa		5.39	□□□□□ -1.55
SNF11	YDR073W	VRG4	P40107	337 aa		5.39	□□□□□ -1.55
SNF11	YDR073W	GCD10	P41814	478 aa		5.39	□□□□□ -1.55
SNF11	YDR073W	YGL114W	P53134	725 aa		5.39	□□□□□ -1.55
SNF11	YDR073W	PNC1	P53184	216 aa	Known RBP	5.39	□□□□□ -1.55
SNF11	YDR073W	YGR266W	P53326	701 aa		5.39	□□□□□ -1.55
SNF11	YDR073W	YNL146W	P53906	100 aa		5.39	□□□□□ -1.55
SNF11	YDR073W	TPO3	Q06451	622 aa		5.39	□□□□□ -1.55
SNF11	YDR073W	PUS9	Q12069	462 aa		5.39	□□□□□ -1.55
SNF11	YDR073W	YOR012W	Q12351	137 aa		5.39	□□□□□ -1.55
SNF11	YDR073W	RAD57	P25301	460 aa		5.38	□□□□□ -1.55
SNF11	YDR073W	GID7	P25569	745 aa		5.38	□□□□□ -1.55
SNF11	YDR073W	SNC1	P31109	117 aa		5.38	□□□□□ -1.55
SNF11	YDR073W	PEX18	P38855	283 aa		5.38	□□□□□ -1.55
SNF11	YDR073W	YER079W	P40052	210 aa	Known RBP	5.38	□□□□□ -1.55
SNF11	YDR073W	PKP2	P53170	491 aa		5.38	□□□□□ -1.55
SNF11	YDR073W	SUN4	P53616	420 aa		5.38	□□□□□ -1.55
SNF11	YDR073W	YDR387C	Q04162	555 aa		5.38	□□□□□ -1.55
SNF11	YDR073W	BSP1	Q06604	576 aa		5.38	□□□□□ -1.55
SNF11	YDR073W	YPR078C	Q06813	372 aa		5.38	□□□□□ -1.55
SNF11	YDR073W	EDE1	P34216	1381 aa		5.38	□□□□□ -1.55
SNF11	YDR073W	HMX1	P32339	317 aa		5.37	□□□□□ -1.55
SNF11	YDR073W	SMY1	P32364	656 aa	Known RBP	5.37	□□□□□ -1.55
SNF11	YDR073W	RAD24	P32641	659 aa		5.37	□□□□□ -1.55
SNF11	YDR073W	RGT1	P32862	1170 aa		5.37	□□□□□ -1.55
SNF11	YDR073W	MRPL37	P36532	105 aa		5.37	□□□□□ -1.55
SNF11	YDR073W	SWC5	P38326	303 aa		5.37	□□□□□ -1.55
SNF11	YDR073W	ERG7	P38604	731 aa		5.37	□□□□□ -1.55
SNF11	YDR073W	BFR1	P38934	470 aa	Known RBP RIP-Chip data	5.37	□□□□□ -1.55	not detected
SNF11	YDR073W	YEL020C	P39994	560 aa		5.37	□□□□□ -1.55
SNF11	YDR073W	SNL1	P40548	159 aa		5.37	□□□□□ -1.55

Retrieved 100 of 5,963 RNA–protein pairs in 48.5 ms