RNA–Protein interactions for RNA: YDR013W

PSF1, Transcript of Subunit of the GINS complex (Sld5p, Psf1p, Psf2p, Psf3p), yeast

Gene PSF1, Length 627 nt, Biotype protein coding.

RNA		Protein				Prediction (catRAPID)		Interaction (RIP-Chip)
Gene	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	Detected Interaction
PSF1	YDR013W	YDL199C	Q12407	687 aa		3.23	□□□□□ -1.89
PSF1	YDR013W	PEX11	Q12462	236 aa		3.23	□□□□□ -1.89
PSF1	YDR013W	Q0010	Q9ZZX9	128 aa		3.23	□□□□□ -1.89
PSF1	YDR013W	MF(ALPHA)1	P01149	165 aa		3.22	□□□□□ -1.89
PSF1	YDR013W	HXK2	P04807	486 aa	Known RBP	3.22	□□□□□ -1.89
PSF1	YDR013W	RHO1	P06780	209 aa	Known RBP	3.22	□□□□□ -1.89
PSF1	YDR013W	CBS2	P14905	389 aa		3.22	□□□□□ -1.89
PSF1	YDR013W	MTF1	P14908	341 aa	Known RBP	3.22	□□□□□ -1.89
PSF1	YDR013W	CLN2	P20438	545 aa		3.22	□□□□□ -1.89
PSF1	YDR013W	PRI2	P20457	528 aa		3.22	□□□□□ -1.89
PSF1	YDR013W	IDP1	P21954	428 aa	Known RBP	3.22	□□□□□ -1.89
PSF1	YDR013W	SGV1	P23293	657 aa	Known RBP	3.22	□□□□□ -1.89
PSF1	YDR013W	PEX34	P25584	144 aa		3.22	□□□□□ -1.89
PSF1	YDR013W	CMK1	P27466	446 aa	Known RBP	3.22	□□□□□ -1.89
PSF1	YDR013W	VMA6	P32366	345 aa	Known RBP	3.22	□□□□□ -1.89
PSF1	YDR013W	RPN2	P32565	945 aa	Known RBP	3.22	□□□□□ -1.89
PSF1	YDR013W	CYS4	P32582	507 aa	Known RBP	3.22	□□□□□ -1.89
PSF1	YDR013W	SEC17	P32602	292 aa		3.22	□□□□□ -1.89
PSF1	YDR013W	PET127	P32606	800 aa		3.22	□□□□□ -1.89
PSF1	YDR013W	YPT7	P32939	208 aa		3.22	□□□□□ -1.89
PSF1	YDR013W	TIP20	P33891	701 aa		3.22	□□□□□ -1.89
PSF1	YDR013W	SCD5	P34758	872 aa		3.22	□□□□□ -1.89
PSF1	YDR013W	GCS1	P35197	352 aa		3.22	□□□□□ -1.89
PSF1	YDR013W	YPT52	P36018	234 aa	Known RBP	3.22	□□□□□ -1.89
PSF1	YDR013W	SKG1	P36169	355 aa		3.22	□□□□□ -1.89
PSF1	YDR013W	GRS1	P38088	690 aa	Known RBP	3.22	□□□□□ -1.89
PSF1	YDR013W	APM3	P38153	483 aa		3.22	□□□□□ -1.89
PSF1	YDR013W	SLX1	P38324	304 aa		3.22	□□□□□ -1.89
PSF1	YDR013W	INM1	P38710	295 aa		3.22	□□□□□ -1.89
PSF1	YDR013W	EGD2	P38879	174 aa	Known RBP	3.22	□□□□□ -1.89
PSF1	YDR013W	DUN1	P39009	513 aa		3.22	□□□□□ -1.89
PSF1	YDR013W	MTW1	P39731	289 aa		3.22	□□□□□ -1.89
PSF1	YDR013W	EMP65	P40085	556 aa		3.22	□□□□□ -1.89
PSF1	YDR013W	LAS21	P40367	830 aa		3.22	□□□□□ -1.89
PSF1	YDR013W	YIR016W	P40572	265 aa		3.22	□□□□□ -1.89
PSF1	YDR013W	GTS1	P40956	396 aa		3.22	□□□□□ -1.89
PSF1	YDR013W	GYP8	P43570	497 aa		3.22	□□□□□ -1.89
PSF1	YDR013W	SNG1	P46950	547 aa		3.22	□□□□□ -1.89
PSF1	YDR013W	YJR030C	P47101	745 aa		3.22	□□□□□ -1.89
PSF1	YDR013W	AMA1	P50082	593 aa		3.22	□□□□□ -1.89
PSF1	YDR013W	SDT1	P53078	280 aa		3.22	□□□□□ -1.89
PSF1	YDR013W	AIM14	P53109	570 aa		3.22	□□□□□ -1.89
PSF1	YDR013W	SLD3	P53135	668 aa		3.22	□□□□□ -1.89
PSF1	YDR013W	YNR065C	P53751	1116 aa		3.22	□□□□□ -1.89
PSF1	YDR013W	PEX13	P80667	386 aa		3.22	□□□□□ -1.89
PSF1	YDR013W	NPL3	Q01560	414 aa	Known RBP RIP-Chip data	3.22	□□□□□ -1.89	not detected
PSF1	YDR013W	RRN5	Q02983	363 aa		3.22	□□□□□ -1.89
PSF1	YDR013W	RSC9	Q03124	581 aa		3.22	□□□□□ -1.89
PSF1	YDR013W	SNZ1	Q03148	297 aa		3.22	□□□□□ -1.89
PSF1	YDR013W	SEG1	Q04279	960 aa		3.22	□□□□□ -1.89
PSF1	YDR013W	RTN1	Q04947	295 aa	Known RBP	3.22	□□□□□ -1.89
PSF1	YDR013W	ECM30	Q06673	1274 aa		3.22	□□□□□ -1.89
PSF1	YDR013W	YOL159C	Q08300	171 aa		3.22	□□□□□ -1.89
PSF1	YDR013W	RPN13	O13563	156 aa		3.21	□□□□□ -1.9
PSF1	YDR013W	SPT15	P13393	240 aa	Known RBP	3.21	□□□□□ -1.9
PSF1	YDR013W	APA1	P16550	321 aa	Known RBP	3.21	□□□□□ -1.9
PSF1	YDR013W	PHO81	P17442	1178 aa		3.21	□□□□□ -1.9
PSF1	YDR013W	PPH22	P23595	377 aa		3.21	□□□□□ -1.9
PSF1	YDR013W	RPL24B	P24000	155 aa	Known RBP	3.21	□□□□□ -1.9
PSF1	YDR013W	CTR86	P25355	563 aa		3.21	□□□□□ -1.9
PSF1	YDR013W	APE2	P32454	952 aa	Known RBP	3.21	□□□□□ -1.9
PSF1	YDR013W	PRP19	P32523	503 aa	Known RBP	3.21	□□□□□ -1.9
PSF1	YDR013W	TEF4	P36008	412 aa	Known RBP	3.21	□□□□□ -1.9
PSF1	YDR013W	ROT2	P38138	954 aa		3.21	□□□□□ -1.9
PSF1	YDR013W	RPS20	P38701	121 aa	Known RBP	3.21	□□□□□ -1.9
PSF1	YDR013W	UBA4	P38820	440 aa		3.21	□□□□□ -1.9
PSF1	YDR013W	YHR219W	P38900	624 aa		3.21	□□□□□ -1.9
PSF1	YDR013W	RSP5	P39940	809 aa	Known RBP	3.21	□□□□□ -1.9
PSF1	YDR013W	GDI1	P39958	451 aa	Known RBP	3.21	□□□□□ -1.9
PSF1	YDR013W	AVT6	P40074	448 aa		3.21	□□□□□ -1.9
PSF1	YDR013W	JLP2	P40206	208 aa		3.21	□□□□□ -1.9
PSF1	YDR013W	SOK1	P40317	901 aa		3.21	□□□□□ -1.9
PSF1	YDR013W	KTR7	P40504	517 aa		3.21	□□□□□ -1.9
PSF1	YDR013W	VHR1	P40522	640 aa		3.21	□□□□□ -1.9
PSF1	YDR013W	FAF1	P40546	346 aa	Predicted RBP	3.21	□□□□□ -1.9
PSF1	YDR013W	GAB1	P41733	394 aa		3.21	□□□□□ -1.9
PSF1	YDR013W	YJL055W	P47044	245 aa		3.21	□□□□□ -1.9
PSF1	YDR013W	RIM21	P48565	533 aa		3.21	□□□□□ -1.9
PSF1	YDR013W	SAM37	P50110	327 aa		3.21	□□□□□ -1.9
PSF1	YDR013W	FOL2	P51601	243 aa	Known RBP	3.21	□□□□□ -1.9
PSF1	YDR013W	MAL11	P53048	616 aa		3.21	□□□□□ -1.9
PSF1	YDR013W	MNT2	P53059	558 aa		3.21	□□□□□ -1.9
PSF1	YDR013W	MDM34	P53083	459 aa		3.21	□□□□□ -1.9
PSF1	YDR013W	SWC4	P53201	476 aa		3.21	□□□□□ -1.9
PSF1	YDR013W	IMP4	P53941	290 aa	Known RBP	3.21	□□□□□ -1.9
PSF1	YDR013W	YNL018C	P53976	612 aa		3.21	□□□□□ -1.9
PSF1	YDR013W	NUP49	Q02199	472 aa		3.21	□□□□□ -1.9
PSF1	YDR013W	YPL071C	Q02864	156 aa		3.21	□□□□□ -1.9
PSF1	YDR013W	YPL107W	Q02873	248 aa		3.21	□□□□□ -1.9
PSF1	YDR013W	YDR179W-A	Q03983	463 aa		3.21	□□□□□ -1.9
PSF1	YDR013W	SMP3	Q04174	516 aa		3.21	□□□□□ -1.9
PSF1	YDR013W	EMI1	Q04406	187 aa		3.21	□□□□□ -1.9
PSF1	YDR013W	CDA2	Q06703	312 aa		3.21	□□□□□ -1.9
PSF1	YDR013W	PSR1	Q07800	427 aa		3.21	□□□□□ -1.9
PSF1	YDR013W	THP1	Q08231	455 aa		3.21	□□□□□ -1.9
PSF1	YDR013W	RKM1	Q08961	583 aa	Predicted RBP	3.21	□□□□□ -1.9
PSF1	YDR013W	FLC1	Q08967	793 aa		3.21	□□□□□ -1.9
PSF1	YDR013W	ATG29	Q12092	213 aa		3.21	□□□□□ -1.9
PSF1	YDR013W	RBD2	Q12270	262 aa		3.21	□□□□□ -1.9
PSF1	YDR013W	RRP42	Q12277	265 aa	Predicted RBP	3.21	□□□□□ -1.9

Retrieved 100 of 5,963 RNA–protein pairs in 12.7 ms