RNA–Protein interactions for RNA: YDL115C

IWR1, Transcript of RNA polymerase II transport factor, conserved from yeast to humans, yeast

Gene IWR1, Length 1,062 nt, Biotype protein coding.

RNA		Protein				Prediction (catRAPID)		Interaction (RIP-Chip)
Gene	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	Detected Interaction
IWR1	YDL115C	YGL108C	P53139	140 aa		4.94	□□□□□ -1.62
IWR1	YDL115C	SWC4	P53201	476 aa		4.94	□□□□□ -1.62
IWR1	YDL115C	COS6	P53344	381 aa		4.94	□□□□□ -1.62
IWR1	YDL115C	VAC7	P53950	1165 aa		4.94	□□□□□ -1.62
IWR1	YDL115C	ARP4	P80428	489 aa		4.94	□□□□□ -1.62
IWR1	YDL115C	GOT1	Q03554	138 aa		4.94	□□□□□ -1.62
IWR1	YDL115C	HMO1	Q03973	246 aa	Known RBP	4.94	□□□□□ -1.62
IWR1	YDL115C	GRS2	Q06817	618 aa		4.94	□□□□□ -1.62
IWR1	YDL115C	VAM6	Q07468	1049 aa		4.94	□□□□□ -1.62
IWR1	YDL115C	ESA1	Q08649	445 aa		4.94	□□□□□ -1.62
IWR1	YDL115C	MCH5	Q08777	521 aa		4.94	□□□□□ -1.62
IWR1	YDL115C	MRH1	Q12117	320 aa	Predicted RBP	4.94	□□□□□ -1.62
IWR1	YDL115C	ACF2	Q12168	779 aa		4.94	□□□□□ -1.62
IWR1	YDL115C	YPL247C	Q12523	523 aa		4.94	□□□□□ -1.62
IWR1	YDL115C	SRN2	Q99176	213 aa		4.94	□□□□□ -1.62
IWR1	YDL115C	MPD2	Q99316	277 aa		4.94	□□□□□ -1.62
IWR1	YDL115C	DIF1	O13577	133 aa		4.93	□□□□□ -1.62
IWR1	YDL115C	YLR415C	O13578	112 aa		4.93	□□□□□ -1.62
IWR1	YDL115C	RPL24A	P04449	155 aa	Known RBP	4.93	□□□□□ -1.62
IWR1	YDL115C	TPK2	P06245	380 aa		4.93	□□□□□ -1.62
IWR1	YDL115C	BET2	P20133	325 aa		4.93	□□□□□ -1.62
IWR1	YDL115C	EPT1	P22140	391 aa		4.93	□□□□□ -1.62
IWR1	YDL115C	DBR1	P24309	405 aa	Known RBP	4.93	□□□□□ -1.62
IWR1	YDL115C	SPS22	P25380	463 aa		4.93	□□□□□ -1.62
IWR1	YDL115C	IMG2	P25642	146 aa	Predicted RBP	4.93	□□□□□ -1.62
IWR1	YDL115C	BUD14	P27637	709 aa		4.93	□□□□□ -1.62
IWR1	YDL115C	RPS1A	P33442	255 aa	Known RBP	4.93	□□□□□ -1.62
IWR1	YDL115C	SIP2	P34164	415 aa	Known RBP	4.93	□□□□□ -1.62
IWR1	YDL115C	HES1	P35843	434 aa		4.93	□□□□□ -1.62
IWR1	YDL115C	ALY1	P36117	915 aa		4.93	□□□□□ -1.62
IWR1	YDL115C	DBP8	P38719	431 aa		4.93	□□□□□ -1.62
IWR1	YDL115C	PCL5	P38794	229 aa		4.93	□□□□□ -1.62
IWR1	YDL115C	BEM4	P39011	633 aa		4.93	□□□□□ -1.62
IWR1	YDL115C	RIO2	P40160	425 aa	Known RBP	4.93	□□□□□ -1.62
IWR1	YDL115C	MPS3	P47069	682 aa		4.93	□□□□□ -1.62
IWR1	YDL115C	HXT16	P47185	567 aa		4.93	□□□□□ -1.62
IWR1	YDL115C	GTO1	P48239	356 aa		4.93	□□□□□ -1.62
IWR1	YDL115C	MUP1	P50276	574 aa		4.93	□□□□□ -1.62
IWR1	YDL115C	COG7	P53195	279 aa		4.93	□□□□□ -1.62
IWR1	YDL115C	TIM44	Q01852	431 aa		4.93	□□□□□ -1.62
IWR1	YDL115C	RNY1	Q02933	434 aa	Known RBP	4.93	□□□□□ -1.62
IWR1	YDL115C	MMT1	Q03218	510 aa		4.93	□□□□□ -1.62
IWR1	YDL115C	ARX1	Q03862	593 aa	Known RBP	4.93	□□□□□ -1.62
IWR1	YDL115C	YHM2	Q04013	314 aa		4.93	□□□□□ -1.62
IWR1	YDL115C	DYN3	Q04949	312 aa		4.93	□□□□□ -1.62
IWR1	YDL115C	ATG26	Q06321	1198 aa		4.93	□□□□□ -1.62
IWR1	YDL115C	HBT1	Q07653	1046 aa	Known RBP	4.93	□□□□□ -1.62
IWR1	YDL115C	OSW1	Q08692	278 aa		4.93	□□□□□ -1.62
IWR1	YDL115C	SNX3	Q08826	162 aa	Known RBP	4.93	□□□□□ -1.62
IWR1	YDL115C	YLR049C	Q12110	428 aa		4.93	□□□□□ -1.62
IWR1	YDL115C	PER33	Q12144	273 aa		4.93	□□□□□ -1.62
IWR1	YDL115C	RMD5	Q12508	421 aa		4.93	□□□□□ -1.62
IWR1	YDL115C	MSF1	P08425	469 aa		4.92	□□□□□ -1.62
IWR1	YDL115C	YKR104W	P0CE69	306 aa		4.92	□□□□□ -1.62
IWR1	YDL115C	PHO3	P24031	467 aa		4.92	□□□□□ -1.62
IWR1	YDL115C	PHO84	P25297	587 aa	Known RBP	4.92	□□□□□ -1.62
IWR1	YDL115C	PUP3	P25451	205 aa	Known RBP	4.92	□□□□□ -1.62
IWR1	YDL115C	SWE1	P32944	819 aa		4.92	□□□□□ -1.62
IWR1	YDL115C	MTC2	P34246	357 aa		4.92	□□□□□ -1.62
IWR1	YDL115C	VPS21	P36017	210 aa	Known RBP	4.92	□□□□□ -1.62
IWR1	YDL115C	YBL029W	P38201	376 aa		4.92	□□□□□ -1.62
IWR1	YDL115C	UBA4	P38820	440 aa		4.92	□□□□□ -1.62
IWR1	YDL115C	NPT1	P39683	429 aa	Known RBP	4.92	□□□□□ -1.62
IWR1	YDL115C	EMP65	P40085	556 aa		4.92	□□□□□ -1.62
IWR1	YDL115C	LSM5	P40089	93 aa	Known RBP	4.92	□□□□□ -1.62
IWR1	YDL115C	UTP18	P40362	594 aa	Predicted RBP	4.92	□□□□□ -1.62
IWR1	YDL115C	GCD10	P41814	478 aa		4.92	□□□□□ -1.62
IWR1	YDL115C	RMD8	P43620	662 aa		4.92	□□□□□ -1.62
IWR1	YDL115C	SET2	P46995	733 aa	Known RBP	4.92	□□□□□ -1.62
IWR1	YDL115C	TY4A-J	P47023	414 aa		4.92	□□□□□ -1.62
IWR1	YDL115C	PMT3	P47190	753 aa		4.92	□□□□□ -1.62
IWR1	YDL115C	UPF3	P48412	387 aa	Known RBP	4.92	□□□□□ -1.62
IWR1	YDL115C	VMA10	P48836	114 aa	Known RBP	4.92	□□□□□ -1.62
IWR1	YDL115C	IMA1	P53051	589 aa		4.92	□□□□□ -1.62
IWR1	YDL115C	EMC4	P53073	190 aa		4.92	□□□□□ -1.62
IWR1	YDL115C	NMA2	P53204	395 aa		4.92	□□□□□ -1.62
IWR1	YDL115C	PRP38	Q00723	242 aa	Predicted RBP	4.92	□□□□□ -1.62
IWR1	YDL115C	IRC15	Q02733	499 aa		4.92	□□□□□ -1.62
IWR1	YDL115C	NRG1	Q03125	231 aa		4.92	□□□□□ -1.62
IWR1	YDL115C	YET2	Q04210	160 aa		4.92	□□□□□ -1.62
IWR1	YDL115C	RIF2	Q06208	395 aa		4.92	□□□□□ -1.62
IWR1	YDL115C	GGA1	Q06336	557 aa		4.92	□□□□□ -1.62
IWR1	YDL115C	NSE1	Q07913	336 aa		4.92	□□□□□ -1.62
IWR1	YDL115C	MUM3	Q08750	479 aa		4.92	□□□□□ -1.62
IWR1	YDL115C	YDR056C	Q12025	205 aa		4.92	□□□□□ -1.62
IWR1	YDL115C	THP2	O13539	261 aa	Known RBP	4.91	□□□□□ -1.62
IWR1	YDL115C	ATP4	P05626	244 aa		4.91	□□□□□ -1.62
IWR1	YDL115C	SPT15	P13393	240 aa	Known RBP	4.91	□□□□□ -1.62
IWR1	YDL115C	FPR1	P20081	114 aa	Known RBP	4.91	□□□□□ -1.62
IWR1	YDL115C	ERG6	P25087	383 aa	Known RBP	4.91	□□□□□ -1.62
IWR1	YDL115C	GFD2	P25370	566 aa	Known RBP	4.91	□□□□□ -1.62
IWR1	YDL115C	PHO91	P27514	894 aa		4.91	□□□□□ -1.62
IWR1	YDL115C	MRPL9	P31334	269 aa		4.91	□□□□□ -1.62
IWR1	YDL115C	TFC1	P32367	649 aa		4.91	□□□□□ -1.62
IWR1	YDL115C	CBF5	P33322	483 aa	Known RBP RIP-Chip data	4.91	□□□□□ -1.62	not detected
IWR1	YDL115C	PTC1	P35182	281 aa		4.91	□□□□□ -1.62
IWR1	YDL115C	CAF4	P36130	643 aa		4.91	□□□□□ -1.62
IWR1	YDL115C	YCR087C-A	P37263	153 aa		4.91	□□□□□ -1.62
IWR1	YDL115C	CYC2	P38909	366 aa		4.91	□□□□□ -1.62
IWR1	YDL115C	CCT6	P39079	546 aa		4.91	□□□□□ -1.62

Retrieved 100 of 5,963 RNA–protein pairs in 19.7 ms