RNA–Protein interactions for RNA: YDL111C

RRP42, Transcript of Exosome non-catalytic core component, yeastyeast

Gene RRP42, Length 798 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
RRP42YDL111C PCL6P40038 420 aa3.29□□□□□ -1.88
RRP42YDL111C SAS2P40963 338 aa3.29□□□□□ -1.88
RRP42YDL111C YGL082WP53155 381 aa3.29□□□□□ -1.88
RRP42YDL111C ADA2Q02336 434 aa3.29□□□□□ -1.88
RRP42YDL111C SLD5Q03406 294 aa3.29□□□□□ -1.88
RRP42YDL111C TAF12Q03761 539 aa3.29□□□□□ -1.88
RRP42YDL111C PHO92Q06390 306 aa3.29□□□□□ -1.88
RRP42YDL111C GSH2Q08220 491 aa3.29□□□□□ -1.88
RRP42YDL111C THI20Q08224 551 aa3.29□□□□□ -1.88
RRP42YDL111C REX3Q12090 404 aa3.29□□□□□ -1.88
RRP42YDL111C LSP1Q12230 341 aaKnown RBP3.29□□□□□ -1.88
RRP42YDL111C SRN2Q99176 213 aa3.29□□□□□ -1.88
RRP42YDL111C HIS4P00815 799 aaKnown RBP3.28□□□□□ -1.88
RRP42YDL111C ALG1P16661 449 aa3.28□□□□□ -1.88
RRP42YDL111C FAA1P30624 700 aaKnown RBP3.28□□□□□ -1.88
RRP42YDL111C VPS17P32913 551 aa3.28□□□□□ -1.88
RRP42YDL111C PDR3P33200 976 aa3.28□□□□□ -1.88
RRP42YDL111C SOR1P35497 357 aaKnown RBP3.28□□□□□ -1.88
RRP42YDL111C MIC60P36112 540 aa3.28□□□□□ -1.88
RRP42YDL111C SCO2P38072 301 aa3.28□□□□□ -1.88
RRP42YDL111C SPC97P38863 823 aa3.28□□□□□ -1.88
RRP42YDL111C PES4P39684 611 aa3.28□□□□□ -1.88
RRP42YDL111C GPI8P49018 411 aa3.28□□□□□ -1.88
RRP42YDL111C PDR16P53860 351 aaKnown RBP3.28□□□□□ -1.88
RRP42YDL111C KTR5P53966 522 aaPredicted RBP3.28□□□□□ -1.88
RRP42YDL111C SAM50P53969 484 aa3.28□□□□□ -1.88
RRP42YDL111C MSS11Q03825 758 aa3.28□□□□□ -1.88
RRP42YDL111C BNA5Q05979 453 aa3.28□□□□□ -1.88
RRP42YDL111C SOR2Q07786 357 aa3.28□□□□□ -1.88
RRP42YDL111C COX3P00420 269 aa3.27□□□□□ -1.89
RRP42YDL111C YER190C-BP0CX94 160 aa3.27□□□□□ -1.89
RRP42YDL111C YEL077W-AP0CX95 160 aa3.27□□□□□ -1.89
RRP42YDL111C YGR296C-BP0CX96 160 aa3.27□□□□□ -1.89
RRP42YDL111C YPL283W-BP0CX97 160 aa3.27□□□□□ -1.89
RRP42YDL111C YPR204C-AP0CX98 160 aa3.27□□□□□ -1.89
RRP42YDL111C DAL5P15365 543 aa3.27□□□□□ -1.89
RRP42YDL111C HNM1P19807 563 aa3.27□□□□□ -1.89
RRP42YDL111C UBA1P22515 1024 aaKnown RBP3.27□□□□□ -1.89
RRP42YDL111C AIM17P23180 465 aaKnown RBP3.27□□□□□ -1.89
RRP42YDL111C BUB3P26449 341 aa3.27□□□□□ -1.89
RRP42YDL111C NDI1P32340 513 aa3.27□□□□□ -1.89
RRP42YDL111C ASK1P35734 292 aa3.27□□□□□ -1.89
RRP42YDL111C YNK1P36010 153 aaKnown RBP3.27□□□□□ -1.89
RRP42YDL111C PCA1P38360 1216 aa3.27□□□□□ -1.89
RRP42YDL111C OSH3P38713 996 aaKnown RBP3.27□□□□□ -1.89
RRP42YDL111C STN1P38960 494 aa3.27□□□□□ -1.89
RRP42YDL111C GAT2P40209 560 aa3.27□□□□□ -1.89
RRP42YDL111C PCI8P40512 444 aa3.27□□□□□ -1.89
RRP42YDL111C SCD6P45978 349 aaKnown RBP RIP-Chip data3.27□□□□□ -1.89not detected
RRP42YDL111C PHO86P46956 311 aa3.27□□□□□ -1.89
RRP42YDL111C MDE1P47095 244 aa3.27□□□□□ -1.89
RRP42YDL111C ASN2P49090 572 aaKnown RBP3.27□□□□□ -1.89
RRP42YDL111C RPL15BP54780 204 aaPredicted RBP3.27□□□□□ -1.89
RRP42YDL111C IZH1Q03419 316 aa3.27□□□□□ -1.89
RRP42YDL111C NSE1Q07913 336 aa3.27□□□□□ -1.89
RRP42YDL111C UBX3Q12229 455 aa3.27□□□□□ -1.89
RRP42YDL111C TAL1P15019 335 aaKnown RBP3.26□□□□□ -1.89
RRP42YDL111C RPI1P23250 407 aaKnown RBP3.26□□□□□ -1.89
RRP42YDL111C RDS1P25611 832 aa3.26□□□□□ -1.89
RRP42YDL111C SMY1P32364 656 aaKnown RBP3.26□□□□□ -1.89
RRP42YDL111C APE2P32454 952 aaKnown RBP3.26□□□□□ -1.89
RRP42YDL111C ECM25P32525 599 aa3.26□□□□□ -1.89
RRP42YDL111C ECM15P35195 104 aa3.26□□□□□ -1.89
RRP42YDL111C RRP3P38712 501 aaKnown RBP3.26□□□□□ -1.89
RRP42YDL111C FLO5P38894 1075 aa3.26□□□□□ -1.89
RRP42YDL111C YMR124WP39523 943 aaKnown RBP3.26□□□□□ -1.89
RRP42YDL111C YIL089WP40500 205 aa3.26□□□□□ -1.89
RRP42YDL111C YPS6P40583 537 aa3.26□□□□□ -1.89
RRP42YDL111C TRS85P46944 698 aa3.26□□□□□ -1.89
RRP42YDL111C RPA34P47006 233 aaPredicted RBP3.26□□□□□ -1.89
RRP42YDL111C EFM3P47163 339 aa3.26□□□□□ -1.89
RRP42YDL111C BRO1P48582 844 aa3.26□□□□□ -1.89
RRP42YDL111C SHE4P51534 789 aa3.26□□□□□ -1.89
RRP42YDL111C PIB2P53191 635 aa3.26□□□□□ -1.89
RRP42YDL111C ESBP6P53918 673 aa3.26□□□□□ -1.89
RRP42YDL111C YDR387CQ04162 555 aa3.26□□□□□ -1.89
RRP42YDL111C MRPL1Q04599 285 aa3.26□□□□□ -1.89
RRP42YDL111C VPS74Q06385 345 aa3.26□□□□□ -1.89
RRP42YDL111C YEH2Q07950 538 aa3.26□□□□□ -1.89
RRP42YDL111C RTC5Q12108 567 aaKnown RBP3.26□□□□□ -1.89
RRP42YDL111C AMD1P15274 810 aaKnown RBP3.25□□□□□ -1.89
RRP42YDL111C SEC62P21825 274 aa3.25□□□□□ -1.89
RRP42YDL111C MGR1P25573 417 aa3.25□□□□□ -1.89
RRP42YDL111C PPZ1P26570 692 aa3.25□□□□□ -1.89
RRP42YDL111C PHO91P27514 894 aa3.25□□□□□ -1.89
RRP42YDL111C ACH1P32316 526 aa3.25□□□□□ -1.89
RRP42YDL111C PCF11P39081 626 aaPredicted RBP3.25□□□□□ -1.89
RRP42YDL111C YAL037WP39728 267 aa3.25□□□□□ -1.89
RRP42YDL111C PAC11P40960 533 aa3.25□□□□□ -1.89
RRP42YDL111C GUF1P46943 645 aa3.25□□□□□ -1.89
RRP42YDL111C CUE3P53137 624 aaKnown RBP3.25□□□□□ -1.89
RRP42YDL111C SCW4P53334 386 aaKnown RBP3.25□□□□□ -1.89
RRP42YDL111C YIF1P53845 314 aaKnown RBP3.25□□□□□ -1.89
RRP42YDL111C AQR1P53943 586 aa3.25□□□□□ -1.89
RRP42YDL111C BET4Q00618 327 aa3.25□□□□□ -1.89
RRP42YDL111C PNG1Q02890 363 aa3.25□□□□□ -1.89
RRP42YDL111C URH1Q04179 340 aa3.25□□□□□ -1.89
RRP42YDL111C RRB1Q04225 511 aaKnown RBP3.25□□□□□ -1.89
RRP42YDL111C YMR254CQ04838 102 aa3.25□□□□□ -1.89
RRP42YDL111C IPK1Q06667 281 aa3.25□□□□□ -1.89
Retrieved 100 of 5,963 RNA–protein pairs in 23.3 ms