RNA–Protein interactions for RNA: ENST00000615216.4

CHD9-221, Transcript of chromodomain helicase DNA binding protein 9, humanhuman

TSL 5 BASIC

Gene CHD9, Length 10,603 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHD9-221ENST00000615216 MYO1FO00160 1098 aa4.95□□□□□ -1.62
CHD9-221ENST00000615216 ATP5OP48047 213 aa4.95□□□□□ -1.62
CHD9-221ENST00000615216 STX1BP61266 288 aa4.95□□□□□ -1.62
CHD9-221ENST00000615216 GTF2IP78347 998 aa4.95□□□□□ -1.62
CHD9-221ENST00000615216 PPP2R5CQ13362 524 aa4.95□□□□□ -1.62
CHD9-221ENST00000615216 EAF2Q96CJ1 260 aaPredicted RBP4.95□□□□□ -1.62
CHD9-221ENST00000615216 ZNF577Q9BSK1 485 aa4.95□□□□□ -1.62
CHD9-221ENST00000615216 FGFR1OP2Q9NVK5 253 aa4.95□□□□□ -1.62
CHD9-221ENST00000615216 MAN1B1Q9UKM7 699 aa4.95□□□□□ -1.62
CHD9-221ENST00000615216 PRPF3O43395 683 aaKnown RBP4.95□□□□□ -1.62
CHD9-221ENST00000615216 PDE8BO95263 885 aa4.95□□□□□ -1.62
CHD9-221ENST00000615216 ALAS1P13196 640 aa4.95□□□□□ -1.62
CHD9-221ENST00000615216 ITKQ08881 620 aa4.95□□□□□ -1.62
CHD9-221ENST00000615216 GLE1Q53GS7 698 aaKnown RBP4.95□□□□□ -1.62
CHD9-221ENST00000615216 SGO2Q562F6 1265 aa4.95□□□□□ -1.62
CHD9-221ENST00000615216 SPOUT1Q5T280 376 aaKnown RBP4.95□□□□□ -1.62
CHD9-221ENST00000615216 TRIM68Q6AZZ1 485 aa4.95□□□□□ -1.62
CHD9-221ENST00000615216 SCYL2Q6P3W7 929 aa4.95□□□□□ -1.62
CHD9-221ENST00000615216 VSTM4Q8IW00 320 aa4.95□□□□□ -1.62
CHD9-221ENST00000615216 SDR42E1Q8WUS8 393 aa4.95□□□□□ -1.62
CHD9-221ENST00000615216 FAM193BQ96PV7 902 aaPredicted RBP4.95□□□□□ -1.62
CHD9-221ENST00000615216 SEPT9Q9UHD8 586 aaPredicted RBP4.95□□□□□ -1.62
CHD9-221ENST00000615216 ZNF148Q9UQR1 794 aa4.95□□□□□ -1.62
CHD9-221ENST00000615216 DAAM1Q9Y4D1 1078 aa4.95□□□□□ -1.62
CHD9-221ENST00000615216 HNRNPDLO14979 420 aaKnown RBP4.95□□□□□ -1.62
CHD9-221ENST00000615216 LMNAP02545 664 aaKnown RBP4.95□□□□□ -1.62
CHD9-221ENST00000615216 YWHAGP61981 247 aaKnown RBP eCLIP4.95□□□□□ -1.62
CHD9-221ENST00000615216 MYO1EQ12965 1108 aa4.95□□□□□ -1.62
CHD9-221ENST00000615216 PDCD2Q16342 344 aaPredicted RBP4.95□□□□□ -1.62
CHD9-221ENST00000615216 GNL3Q9BVP2 549 aaKnown RBP eCLIP4.95□□□□□ -1.62
CHD9-221ENST00000615216 DHX36Q9H2U1 1008 aaKnown RBP4.95□□□□□ -1.62
CHD9-221ENST00000615216 SNX25Q9H3E2 840 aa4.95□□□□□ -1.62
CHD9-221ENST00000615216 ADD3Q9UEY8 706 aaKnown RBP4.95□□□□□ -1.62
CHD9-221ENST00000615216 STK36Q9NRP7 1315 aa4.95□□□□□ -1.62
CHD9-221ENST00000615216 LRRIQ4A6NIV6 560 aa4.95□□□□□ -1.62
CHD9-221ENST00000615216 ERCC3P19447 782 aa4.95□□□□□ -1.62
CHD9-221ENST00000615216 STAT2P52630 851 aa4.95□□□□□ -1.62
CHD9-221ENST00000615216 CCNA1P78396 465 aa4.95□□□□□ -1.62
CHD9-221ENST00000615216 DMTNQ08495 405 aa4.95□□□□□ -1.62
CHD9-221ENST00000615216 NR1H3Q13133 447 aa4.95□□□□□ -1.62
CHD9-221ENST00000615216 BIRC2Q13490 618 aa4.95□□□□□ -1.62
CHD9-221ENST00000615216 METTL23Q86XA0 190 aa4.95□□□□□ -1.62
CHD9-221ENST00000615216 BCAS4Q8TDM0 211 aa4.95□□□□□ -1.62
CHD9-221ENST00000615216 HDAC11Q96DB2 347 aa4.95□□□□□ -1.62
CHD9-221ENST00000615216 RPS6KC1Q96S38 1066 aa4.95□□□□□ -1.62
CHD9-221ENST00000615216 IGSF1Q8N6C5 1336 aa4.95□□□□□ -1.62
CHD9-221ENST00000615216 LRRD1A4D1F6 860 aa4.95□□□□□ -1.62
CHD9-221ENST00000615216 SLFN14P0C7P3 912 aa4.95□□□□□ -1.62
CHD9-221ENST00000615216 RFC1P35251 1148 aaPredicted RBP4.95□□□□□ -1.62
CHD9-221ENST00000615216 ADD2P35612 726 aa4.95□□□□□ -1.62
CHD9-221ENST00000615216 IL6STP40189 918 aaPredicted RBP4.95□□□□□ -1.62
CHD9-221ENST00000615216 ADCY2Q08462 1091 aa4.95□□□□□ -1.62
CHD9-221ENST00000615216 RBL2Q08999 1139 aa4.95□□□□□ -1.62
CHD9-221ENST00000615216 TTBK2Q6IQ55 1244 aa4.95□□□□□ -1.62
CHD9-221ENST00000615216 KLC3Q6P597 504 aa4.95□□□□□ -1.62
CHD9-221ENST00000615216 APOA5Q6Q788 366 aa4.95□□□□□ -1.62
CHD9-221ENST00000615216 NSUN7Q8NE18 718 aaKnown RBP4.95□□□□□ -1.62
CHD9-221ENST00000615216 CFAP61Q8NHU2 1237 aa4.95□□□□□ -1.62
CHD9-221ENST00000615216 STAMQ92783 540 aa4.95□□□□□ -1.62
CHD9-221ENST00000615216 ZNF653Q96CK0 615 aa4.95□□□□□ -1.62
CHD9-221ENST00000615216 DPH5Q9H2P9 285 aa4.95□□□□□ -1.62
CHD9-221ENST00000615216 DISC1Q9NRI5 854 aa4.95□□□□□ -1.62
CHD9-221ENST00000615216 SLC12A6Q9UHW9 1150 aa4.95□□□□□ -1.62
CHD9-221ENST00000615216 FKBP3Q00688 224 aaKnown RBP4.95□□□□□ -1.62
CHD9-221ENST00000615216 SEMA3FQ13275 785 aa4.95□□□□□ -1.62
CHD9-221ENST00000615216 SERPINI1Q99574 410 aa4.95□□□□□ -1.62
CHD9-221ENST00000615216 PALD1Q9ULE6 856 aa4.95□□□□□ -1.62
CHD9-221ENST00000615216 CACNA1FO60840 1977 aa4.95□□□□□ -1.62
CHD9-221ENST00000615216 ERVV-1B6SEH8 477 aa4.95□□□□□ -1.62
CHD9-221ENST00000615216 BAG2O95816 211 aa4.95□□□□□ -1.62
CHD9-221ENST00000615216 MSH2P43246 934 aa4.95□□□□□ -1.62
CHD9-221ENST00000615216 GYG1P46976 350 aa4.95□□□□□ -1.62
CHD9-221ENST00000615216 RCAN1P53805 252 aa4.95□□□□□ -1.62
CHD9-221ENST00000615216 ZBTB17Q13105 803 aa4.95□□□□□ -1.62
CHD9-221ENST00000615216 FAM98CQ17RN3 349 aaKnown RBP4.95□□□□□ -1.62
CHD9-221ENST00000615216 FAM186BQ8IYM0 893 aa4.95□□□□□ -1.62
CHD9-221ENST00000615216 CNPY4Q8N129 248 aa4.95□□□□□ -1.62
CHD9-221ENST00000615216 EXOC4Q96A65 974 aa4.95□□□□□ -1.62
CHD9-221ENST00000615216 CLIC6Q96NY7 704 aa4.95□□□□□ -1.62
CHD9-221ENST00000615216 KMT5AQ9NQR1 393 aa4.95□□□□□ -1.62
CHD9-221ENST00000615216 USP21Q9UK80 565 aa4.95□□□□□ -1.62
CHD9-221ENST00000615216 NPHP4O75161 1426 aaPredicted RBP4.95□□□□□ -1.62
CHD9-221ENST00000615216 IPO5O00410 1097 aaKnown RBP4.95□□□□□ -1.62
CHD9-221ENST00000615216 OSBPP22059 807 aa4.95□□□□□ -1.62
CHD9-221ENST00000615216 EIF2AQ9BY44 585 aaKnown RBP4.95□□□□□ -1.62
CHD9-221ENST00000615216 SRPRBQ9Y5M8 271 aaKnown RBP4.95□□□□□ -1.62
CHD9-221ENST00000615216 SYNGAP1Q96PV0 1343 aa4.94□□□□□ -1.62
CHD9-221ENST00000615216 CCDC151A5D8V7 595 aa4.94□□□□□ -1.62
CHD9-221ENST00000615216 TMEM232C9JQI7 657 aa4.94□□□□□ -1.62
CHD9-221ENST00000615216 HGSO14964 777 aaPredicted RBP4.94□□□□□ -1.62
CHD9-221ENST00000615216 IGSF3O75054 1194 aa4.94□□□□□ -1.62
CHD9-221ENST00000615216 CAV1Q03135 178 aa4.94□□□□□ -1.62
CHD9-221ENST00000615216 CUL4AQ13619 759 aa4.94□□□□□ -1.62
CHD9-221ENST00000615216 C6orf118Q5T5N4 469 aa4.94□□□□□ -1.62
CHD9-221ENST00000615216 RESP18Q5W5W9 173 aa4.94□□□□□ -1.62
CHD9-221ENST00000615216 PPP1R18Q6NYC8 613 aa4.94□□□□□ -1.62
CHD9-221ENST00000615216 GADL1Q6ZQY3 521 aa4.94□□□□□ -1.62
CHD9-221ENST00000615216 BZW1Q7L1Q6 419 aaKnown RBP4.94□□□□□ -1.62
CHD9-221ENST00000615216 PROM2Q8N271 834 aa4.94□□□□□ -1.62
CHD9-221ENST00000615216 SLC35F6Q8N357 371 aa4.94□□□□□ -1.62
Retrieved 100 of 20,778 RNA–protein pairs in 79.7 ms