RNA–Protein interactions for RNA: ENST00000505659.1

HMGB1P29-201, Transcript of high mobility group box 1 pseudogene 29, humanhuman

BASIC

Gene HMGB1P29, Length 499 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB1P29-201ENST00000505659 FAM209AQ5JX71 171 aa5.35□□□□□ -1.55
HMGB1P29-201ENST00000505659 LIPIQ6XZB0 460 aa5.35□□□□□ -1.55
HMGB1P29-201ENST00000505659 FAM126BQ8IXS8 530 aa5.35□□□□□ -1.55
HMGB1P29-201ENST00000505659 RBM12BQ8IXT5 1001 aaKnown RBP5.35□□□□□ -1.55
HMGB1P29-201ENST00000505659 NLGN1Q8N2Q7 840 aa5.35□□□□□ -1.55
HMGB1P29-201ENST00000505659 PIP4K2CQ8TBX8 421 aa5.35□□□□□ -1.55
HMGB1P29-201ENST00000505659 PMFBP1Q8TBY8 1022 aa5.35□□□□□ -1.55
HMGB1P29-201ENST00000505659 ZBTB8AQ96BR9 441 aa5.35□□□□□ -1.55
HMGB1P29-201ENST00000505659 DEPDC7Q96QD5 511 aa5.35□□□□□ -1.55
HMGB1P29-201ENST00000505659 SPATA25Q9BR10 227 aa5.35□□□□□ -1.55
HMGB1P29-201ENST00000505659 EPB41L1Q9H4G0 881 aa5.35□□□□□ -1.55
HMGB1P29-201ENST00000505659 SPATA6Q9NWH7 488 aaPredicted RBP5.35□□□□□ -1.55
HMGB1P29-201ENST00000505659 SNTG2Q9NY99 539 aa5.35□□□□□ -1.55
HMGB1P29-201ENST00000505659 SIRPGQ9P1W8 387 aa5.35□□□□□ -1.55
HMGB1P29-201ENST00000505659 PCDHB4Q9Y5E5 795 aa5.35□□□□□ -1.55
HMGB1P29-201ENST00000505659 TCRBV5S2A0A599 114 aa5.34□□□□□ -1.55
HMGB1P29-201ENST00000505659 HGSO14964 777 aaPredicted RBP5.34□□□□□ -1.55
HMGB1P29-201ENST00000505659 TADA3O75528 432 aa5.34□□□□□ -1.55
HMGB1P29-201ENST00000505659 COL6A2P12110 1019 aa5.34□□□□□ -1.55
HMGB1P29-201ENST00000505659 RBL2Q08999 1139 aa5.34□□□□□ -1.55
HMGB1P29-201ENST00000505659 CR1LQ2VPA4 569 aa5.34□□□□□ -1.55
HMGB1P29-201ENST00000505659 EMC4Q5J8M3 183 aa5.34□□□□□ -1.55
HMGB1P29-201ENST00000505659 LBX2Q6XYB7 198 aa5.34□□□□□ -1.55
HMGB1P29-201ENST00000505659 DCAF4Q8WV16 495 aa5.34□□□□□ -1.55
HMGB1P29-201ENST00000505659 ZNF669Q96BR6 464 aaPredicted RBP5.34□□□□□ -1.55
HMGB1P29-201ENST00000505659 EXOC2Q96KP1 924 aa5.34□□□□□ -1.55
HMGB1P29-201ENST00000505659 DNAJC2Q99543 621 aaKnown RBP5.34□□□□□ -1.55
HMGB1P29-201ENST00000505659 KCNJ15Q99712 375 aa5.34□□□□□ -1.55
HMGB1P29-201ENST00000505659 HIRIP3Q9BW71 556 aaPredicted RBP5.34□□□□□ -1.55
HMGB1P29-201ENST00000505659 ADAM7Q9H2U9 754 aa5.34□□□□□ -1.55
HMGB1P29-201ENST00000505659 RBPJLQ9UBG7 517 aa5.34□□□□□ -1.55
HMGB1P29-201ENST00000505659 ZNF652Q9Y2D9 606 aa5.34□□□□□ -1.55
HMGB1P29-201ENST00000505659 KDM2BQ8NHM5 1336 aa5.33□□□□□ -1.56
HMGB1P29-201ENST00000505659 DGKIO75912 1065 aa5.33□□□□□ -1.56
HMGB1P29-201ENST00000505659 GRK2P25098 689 aa5.33□□□□□ -1.56
HMGB1P29-201ENST00000505659 GRK3P35626 688 aa5.33□□□□□ -1.56
HMGB1P29-201ENST00000505659 ITGA1P56199 1179 aa5.33□□□□□ -1.56
HMGB1P29-201ENST00000505659 STYK1Q6J9G0 422 aa5.33□□□□□ -1.56
HMGB1P29-201ENST00000505659 LILRA6Q6PI73 481 aa5.33□□□□□ -1.56
HMGB1P29-201ENST00000505659 RSPO2Q6UXX9 243 aaPredicted RBP5.33□□□□□ -1.56
HMGB1P29-201ENST00000505659 ZBTB38Q8NAP3 1195 aaPredicted RBP5.33□□□□□ -1.56
HMGB1P29-201ENST00000505659 ARMC5Q96C12 935 aa5.33□□□□□ -1.56
HMGB1P29-201ENST00000505659 CDC6Q99741 560 aa5.33□□□□□ -1.56
HMGB1P29-201ENST00000505659 YIPF4Q9BSR8 244 aa5.33□□□□□ -1.56
HMGB1P29-201ENST00000505659 C11orf84Q9BUA3 381 aaPredicted RBP5.33□□□□□ -1.56
HMGB1P29-201ENST00000505659 LUC7LQ9NQ29 371 aaKnown RBP5.33□□□□□ -1.56
HMGB1P29-201ENST00000505659 MYOTQ9UBF9 498 aa5.33□□□□□ -1.56
HMGB1P29-201ENST00000505659 WASF3Q9UPY6 502 aa5.33□□□□□ -1.56
HMGB1P29-201ENST00000505659 TRBV23-1A0A0A0MS06 115 aa5.32□□□□□ -1.56
HMGB1P29-201ENST00000505659 SH3D21A4FU49 640 aa5.32□□□□□ -1.56
HMGB1P29-201ENST00000505659 SLC27A2O14975 620 aa5.32□□□□□ -1.56
HMGB1P29-201ENST00000505659 SASH1O94885 1247 aa5.32□□□□□ -1.56
HMGB1P29-201ENST00000505659 LTFP02788 710 aa5.32□□□□□ -1.56
HMGB1P29-201ENST00000505659 C6orf222P0C671 652 aaPredicted RBP5.32□□□□□ -1.56
HMGB1P29-201ENST00000505659 CTSWP56202 376 aa5.32□□□□□ -1.56
HMGB1P29-201ENST00000505659 GPR85P60893 370 aa5.32□□□□□ -1.56
HMGB1P29-201ENST00000505659 CAP1Q01518 475 aa5.32□□□□□ -1.56
HMGB1P29-201ENST00000505659 GRIN1Q05586 938 aa5.32□□□□□ -1.56
HMGB1P29-201ENST00000505659 SP8Q8IXZ3 490 aa5.32□□□□□ -1.56
HMGB1P29-201ENST00000505659 LINC00482Q8N8I6 264 aa5.32□□□□□ -1.56
HMGB1P29-201ENST00000505659 ZSWIM3Q96MP5 696 aa5.32□□□□□ -1.56
HMGB1P29-201ENST00000505659 DNAJC7Q99615 494 aa5.32□□□□□ -1.56
HMGB1P29-201ENST00000505659 IPPKQ9H8X2 491 aa5.32□□□□□ -1.56
HMGB1P29-201ENST00000505659 NKRFO15226 690 aaKnown RBP eCLIP5.31□□□□□ -1.56
HMGB1P29-201ENST00000505659 LRG1P02750 347 aa5.31□□□□□ -1.56
HMGB1P29-201ENST00000505659 SOD2P04179 222 aa5.31□□□□□ -1.56
HMGB1P29-201ENST00000505659 THBS2P35442 1172 aa5.31□□□□□ -1.56
HMGB1P29-201ENST00000505659 RBM10P98175 930 aaKnown RBP5.31□□□□□ -1.56
HMGB1P29-201ENST00000505659 ADAM9Q13443 819 aa5.31□□□□□ -1.56
HMGB1P29-201ENST00000505659 RTP5Q14D33 572 aa5.31□□□□□ -1.56
HMGB1P29-201ENST00000505659 CHRNA2Q15822 529 aa5.31□□□□□ -1.56
HMGB1P29-201ENST00000505659 KIZQ2M2Z5 673 aa5.31□□□□□ -1.56
HMGB1P29-201ENST00000505659 OTOP3Q7RTS5 596 aa5.31□□□□□ -1.56
HMGB1P29-201ENST00000505659 ZC3H18Q86VM9 953 aaKnown RBP5.31□□□□□ -1.56
HMGB1P29-201ENST00000505659 IFNL3Q8IZI9 196 aa5.31□□□□□ -1.56
HMGB1P29-201ENST00000505659 CARFQ8N187 725 aa5.31□□□□□ -1.56
HMGB1P29-201ENST00000505659 PUM2Q8TB72 1066 aaKnown RBP eCLIP5.31□□□□□ -1.56
HMGB1P29-201ENST00000505659 SRPK1Q96SB4 655 aaKnown RBP5.31□□□□□ -1.56
HMGB1P29-201ENST00000505659 SLC6A20Q9NP91 592 aa5.31□□□□□ -1.56
HMGB1P29-201ENST00000505659 DTLQ9NZJ0 730 aa5.31□□□□□ -1.56
HMGB1P29-201ENST00000505659 ASH2LQ9UBL3 628 aa5.31□□□□□ -1.56
HMGB1P29-201ENST00000505659 TELO2Q9Y4R8 837 aa5.31□□□□□ -1.56
HMGB1P29-201ENST00000505659 GNAT1P11488 350 aa5.3□□□□□ -1.56
HMGB1P29-201ENST00000505659 KCNC1P48547 511 aa5.3□□□□□ -1.56
HMGB1P29-201ENST00000505659 SUMO1P63165 101 aaKnown RBP5.3□□□□□ -1.56
HMGB1P29-201ENST00000505659 SF3A1Q15459 793 aaKnown RBP5.3□□□□□ -1.56
HMGB1P29-201ENST00000505659 PHF19Q5T6S3 580 aa5.3□□□□□ -1.56
HMGB1P29-201ENST00000505659 NT5DC1Q5TFE4 455 aa5.3□□□□□ -1.56
HMGB1P29-201ENST00000505659 TEPPQ6URK8 271 aa5.3□□□□□ -1.56
HMGB1P29-201ENST00000505659 TMC5Q6UXY8 1006 aa5.3□□□□□ -1.56
HMGB1P29-201ENST00000505659 SCUBE1Q8IWY4 988 aa5.3□□□□□ -1.56
HMGB1P29-201ENST00000505659 KYQ8NBH2 561 aa5.3□□□□□ -1.56
HMGB1P29-201ENST00000505659 CLEC4DQ8WXI8 215 aa5.3□□□□□ -1.56
HMGB1P29-201ENST00000505659 TOE1Q96GM8 510 aaKnown RBP5.3□□□□□ -1.56
HMGB1P29-201ENST00000505659 ZFYVE21Q9BQ24 234 aa5.3□□□□□ -1.56
HMGB1P29-201ENST00000505659 SMOC1Q9H4F8 434 aa5.3□□□□□ -1.56
HMGB1P29-201ENST00000505659 NTMQ9P121 344 aa5.3□□□□□ -1.56
HMGB1P29-201ENST00000505659 RAPGEFL1Q9UHV5 662 aa5.3□□□□□ -1.56
HMGB1P29-201ENST00000505659 MRPS23Q9Y3D9 190 aaKnown RBP5.3□□□□□ -1.56
HMGB1P29-201ENST00000505659 KRIT1O00522 736 aa5.29□□□□□ -1.56
Retrieved 100 of 20,778 RNA–protein pairs in 66.7 ms