RNA–Protein interactions for RNA: ENST00000496959.5

MDM2-220, Transcript of MDM2 proto-oncogene, humanhuman

TSL 1 (best)

Gene MDM2, Length 897 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MDM2-220ENST00000496959 PCDHB4Q9Y5E5 795 aa8.34□□□□□ -1.07
MDM2-220ENST00000496959 ADAMTS20P59510 1910 aa8.34□□□□□ -1.07
MDM2-220ENST00000496959 A0A0G2JLL6 359 aaPredicted RBP8.33□□□□□ -1.08
MDM2-220ENST00000496959 A0A1B0GTL3 188 aa8.33□□□□□ -1.08
MDM2-220ENST00000496959 CCDC85CA6NKD9 419 aa8.33□□□□□ -1.08
MDM2-220ENST00000496959 TADA3O75528 432 aa8.33□□□□□ -1.08
MDM2-220ENST00000496959 LINC00482Q8N8I6 264 aa8.33□□□□□ -1.08
MDM2-220ENST00000496959 PPIL4Q8WUA2 492 aaKnown RBP eCLIP8.33□□□□□ -1.08
MDM2-220ENST00000496959 OSBP2Q969R2 916 aa8.33□□□□□ -1.08
MDM2-220ENST00000496959 ZFYVE21Q9BQ24 234 aa8.33□□□□□ -1.08
MDM2-220ENST00000496959 NTMQ9P121 344 aa8.33□□□□□ -1.08
MDM2-220ENST00000496959 KRIT1O00522 736 aa8.32□□□□□ -1.08
MDM2-220ENST00000496959 MSCO60682 206 aa8.32□□□□□ -1.08
MDM2-220ENST00000496959 NKX3-2P78367 333 aa8.32□□□□□ -1.08
MDM2-220ENST00000496959 DLX2Q07687 328 aaPredicted RBP8.32□□□□□ -1.08
MDM2-220ENST00000496959 SMAD4Q13485 552 aaKnown RBP8.32□□□□□ -1.08
MDM2-220ENST00000496959 NFIXQ14938 502 aa8.32□□□□□ -1.08
MDM2-220ENST00000496959 SPATC1Q76KD6 591 aa8.32□□□□□ -1.08
MDM2-220ENST00000496959 CARFQ8N187 725 aa8.32□□□□□ -1.08
MDM2-220ENST00000496959 FAM26EQ8N5C1 309 aa8.32□□□□□ -1.08
MDM2-220ENST00000496959 KYQ8NBH2 561 aa8.32□□□□□ -1.08
MDM2-220ENST00000496959 PHOSPHO1Q8TCT1 267 aa8.32□□□□□ -1.08
MDM2-220ENST00000496959 RELTQ969Z4 430 aa8.32□□□□□ -1.08
MDM2-220ENST00000496959 GORASP1Q9BQQ3 440 aa8.32□□□□□ -1.08
MDM2-220ENST00000496959 C11orf84Q9BUA3 381 aaPredicted RBP8.32□□□□□ -1.08
MDM2-220ENST00000496959 SMOC1Q9H4F8 434 aa8.32□□□□□ -1.08
MDM2-220ENST00000496959 RTEL1Q9NZ71 1219 aa8.32□□□□□ -1.08
MDM2-220ENST00000496959 STAT5AP42229 794 aa8.31□□□□□ -1.08
MDM2-220ENST00000496959 SARSP49591 514 aaKnown RBP8.31□□□□□ -1.08
MDM2-220ENST00000496959 SSRP1Q08945 709 aaKnown RBP8.31□□□□□ -1.08
MDM2-220ENST00000496959 KIZQ2M2Z5 673 aa8.31□□□□□ -1.08
MDM2-220ENST00000496959 YOD1Q5VVQ6 348 aaPredicted RBP8.31□□□□□ -1.08
MDM2-220ENST00000496959 KCNT2Q6UVM3 1135 aa8.31□□□□□ -1.08
MDM2-220ENST00000496959 LBX2Q6XYB7 198 aa8.31□□□□□ -1.08
MDM2-220ENST00000496959 IFNL3Q8IZI9 196 aa8.31□□□□□ -1.08
MDM2-220ENST00000496959 TTLL6Q8N841 843 aa8.31□□□□□ -1.08
MDM2-220ENST00000496959 IPO9Q96P70 1041 aaKnown RBP8.31□□□□□ -1.08
MDM2-220ENST00000496959 SPATA25Q9BR10 227 aa8.31□□□□□ -1.08
MDM2-220ENST00000496959 JAM3Q9BX67 310 aa8.31□□□□□ -1.08
MDM2-220ENST00000496959 CDIP1Q9H305 208 aa8.31□□□□□ -1.08
MDM2-220ENST00000496959 SPATA6Q9NWH7 488 aaPredicted RBP8.31□□□□□ -1.08
MDM2-220ENST00000496959 MYOTQ9UBF9 498 aa8.31□□□□□ -1.08
MDM2-220ENST00000496959 TCRBV5S2A0A599 114 aa8.3□□□□□ -1.08
MDM2-220ENST00000496959 GPR85P60893 370 aa8.3□□□□□ -1.08
MDM2-220ENST00000496959 RBL2Q08999 1139 aa8.3□□□□□ -1.08
MDM2-220ENST00000496959 NTRK3Q16288 839 aa8.3□□□□□ -1.08
MDM2-220ENST00000496959 STYK1Q6J9G0 422 aa8.3□□□□□ -1.08
MDM2-220ENST00000496959 CYP4F22Q6NT55 531 aa8.3□□□□□ -1.08
MDM2-220ENST00000496959 TOE1Q96GM8 510 aaKnown RBP8.3□□□□□ -1.08
MDM2-220ENST00000496959 CDC6Q99741 560 aa8.3□□□□□ -1.08
MDM2-220ENST00000496959 SLC6A20Q9NP91 592 aa8.3□□□□□ -1.08
MDM2-220ENST00000496959 USP40Q9NVE5 1235 aa8.3□□□□□ -1.08
MDM2-220ENST00000496959 DTLQ9NZJ0 730 aa8.3□□□□□ -1.08
MDM2-220ENST00000496959 PFDN2Q9UHV9 154 aa8.3□□□□□ -1.08
MDM2-220ENST00000496959 GRK2P25098 689 aa8.29□□□□□ -1.08
MDM2-220ENST00000496959 GRK3P35626 688 aa8.29□□□□□ -1.08
MDM2-220ENST00000496959 CR1LQ2VPA4 569 aa8.29□□□□□ -1.08
MDM2-220ENST00000496959 NT5DC1Q5TFE4 455 aa8.29□□□□□ -1.08
MDM2-220ENST00000496959 FRMD5Q7Z6J6 570 aa8.29□□□□□ -1.08
MDM2-220ENST00000496959 SCUBE1Q8IWY4 988 aa8.29□□□□□ -1.08
MDM2-220ENST00000496959 TRIM48Q8IWZ4 208 aa8.29□□□□□ -1.08
MDM2-220ENST00000496959 ARRDC4Q8NCT1 418 aa8.29□□□□□ -1.08
MDM2-220ENST00000496959 SYT3Q9BQG1 590 aa8.29□□□□□ -1.08
MDM2-220ENST00000496959 PPARGC1AQ9UBK2 798 aaKnown RBP8.29□□□□□ -1.08
MDM2-220ENST00000496959 BLACEA4D250 179 aa8.28□□□□□ -1.08
MDM2-220ENST00000496959 THBS2P35442 1172 aa8.28□□□□□ -1.08
MDM2-220ENST00000496959 ITGA1P56199 1179 aa8.28□□□□□ -1.08
MDM2-220ENST00000496959 SPIRE1Q08AE8 756 aa8.28□□□□□ -1.08
MDM2-220ENST00000496959 SF3A1Q15459 793 aaKnown RBP8.28□□□□□ -1.08
MDM2-220ENST00000496959 SOGA3Q5TF21 947 aa8.28□□□□□ -1.08
MDM2-220ENST00000496959 ERICH6BQ5W0A0 696 aa8.28□□□□□ -1.08
MDM2-220ENST00000496959 STK32CQ86UX6 486 aa8.28□□□□□ -1.08
MDM2-220ENST00000496959 ZBTB38Q8NAP3 1195 aaPredicted RBP8.28□□□□□ -1.08
MDM2-220ENST00000496959 PUM2Q8TB72 1066 aaKnown RBP eCLIP8.28□□□□□ -1.086e-14■■□□□ 13.9
MDM2-220ENST00000496959 PIP4K2CQ8TBX8 421 aa8.28□□□□□ -1.08
MDM2-220ENST00000496959 TEPSINQ96N21 525 aa8.28□□□□□ -1.08
MDM2-220ENST00000496959 NUB1Q9Y5A7 615 aa8.28□□□□□ -1.08
MDM2-220ENST00000496959 TRBV23-1A0A0A0MS06 115 aa8.27□□□□□ -1.09
MDM2-220ENST00000496959 B8ZZF3 427 aa8.27□□□□□ -1.09
MDM2-220ENST00000496959 GNAT1P11488 350 aa8.27□□□□□ -1.09
MDM2-220ENST00000496959 RPL13P26373 211 aaKnown RBP8.27□□□□□ -1.09
MDM2-220ENST00000496959 OTOP3Q7RTS5 596 aa8.27□□□□□ -1.09
MDM2-220ENST00000496959 LRP10Q7Z4F1 713 aa8.27□□□□□ -1.09
MDM2-220ENST00000496959 ALG1Q9BT22 464 aa8.27□□□□□ -1.09
MDM2-220ENST00000496959 ASH2LQ9UBL3 628 aa8.27□□□□□ -1.09
MDM2-220ENST00000496959 KRTAP9-7A8MTY7 169 aa8.26□□□□□ -1.09
MDM2-220ENST00000496959 FAM47E-STBD1D6RA91 191 aa8.26□□□□□ -1.09
MDM2-220ENST00000496959 ADCY3O60266 1144 aa8.26□□□□□ -1.09
MDM2-220ENST00000496959 FOXD2O60548 495 aaPredicted RBP8.26□□□□□ -1.09
MDM2-220ENST00000496959 SOD2P04179 222 aa8.26□□□□□ -1.09
MDM2-220ENST00000496959 SYN1P17600 705 aa8.26□□□□□ -1.09
MDM2-220ENST00000496959 GJA9P57773 515 aa8.26□□□□□ -1.09
MDM2-220ENST00000496959 TEPPQ6URK8 271 aa8.26□□□□□ -1.09
MDM2-220ENST00000496959 CXorf38Q8TB03 319 aa8.26□□□□□ -1.09
MDM2-220ENST00000496959 KCNJ15Q99712 375 aa8.26□□□□□ -1.09
MDM2-220ENST00000496959 KDM2BQ8NHM5 1336 aa8.26□□□□□ -1.09
MDM2-220ENST00000496959 AQP7O14520 342 aa8.25□□□□□ -1.09
MDM2-220ENST00000496959 SLC27A2O14975 620 aa8.25□□□□□ -1.09
MDM2-220ENST00000496959 SUMO1P63165 101 aaKnown RBP8.25□□□□□ -1.09
MDM2-220ENST00000496959 SERINC3Q13530 473 aa8.25□□□□□ -1.09
Retrieved 100 of 20,778 RNA–protein pairs in 92.4 ms