RNA–Protein interactions for RNA: ENST00000496959.5

MDM2-220, Transcript of MDM2 proto-oncogene, humanhuman

TSL 1 (best)

Gene MDM2, Length 897 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MDM2-220ENST00000496959 AEBP2Q6ZN18 517 aaPredicted RBP32.64■■■□□ 2.82
MDM2-220ENST00000496959 CHIC1Q5VXU3 224 aa31.66■■■□□ 2.66
MDM2-220ENST00000496959 SENP3Q9H4L4 574 aaPredicted RBP27.83■■■□□ 2.05
MDM2-220ENST00000496959 PHF23Q9BUL5 403 aaPredicted RBP27.76■■■□□ 2.03
MDM2-220ENST00000496959 FOXD1Q16676 465 aa25.81■■□□□ 1.72
MDM2-220ENST00000496959 PLPPR3Q6T4P5 718 aa25.63■■□□□ 1.69
MDM2-220ENST00000496959 PPP6R1Q9UPN7 881 aa24.59■■□□□ 1.53
MDM2-220ENST00000496959 ADRA2BP18089 450 aa24.57■■□□□ 1.52
MDM2-220ENST00000496959 PIAS4Q8N2W9 510 aaPredicted RBP24.31■■□□□ 1.48
MDM2-220ENST00000496959 MSH5O43196 834 aa23.98■■□□□ 1.43
MDM2-220ENST00000496959 SCAF1Q9H7N4 1312 aaKnown RBP22.59■■□□□ 1.21
MDM2-220ENST00000496959 PPP4R3CPQ6ZMV5 832 aa22.52■■□□□ 1.2
MDM2-220ENST00000496959 MAPK8IP2Q13387 824 aaPredicted RBP22.37■■□□□ 1.17
MDM2-220ENST00000496959 POTEDQ86YR6 584 aa22.27■■□□□ 1.16
MDM2-220ENST00000496959 DMRT2Q9Y5R5 561 aa22.14■■□□□ 1.13
MDM2-220ENST00000496959 CNKSR2Q8WXI2 1034 aa21.98■■□□□ 1.11
MDM2-220ENST00000496959 NCBP3Q53F19 620 aaKnown RBP21.91■■□□□ 1.1
MDM2-220ENST00000496959 KCNA4P22459 653 aa21.64■■□□□ 1.05
MDM2-220ENST00000496959 RNF216Q9NWF9 866 aaPredicted RBP21.61■■□□□ 1.05
MDM2-220ENST00000496959 HOXD11P31277 338 aaPredicted RBP21.57■■□□□ 1.04
MDM2-220ENST00000496959 NPM3O75607 178 aaKnown RBP21.51■■□□□ 1.03
MDM2-220ENST00000496959 DCAF8L1A6NGE4 600 aa21.25■□□□□ 0.99
MDM2-220ENST00000496959 DNAJC5BQ9UF47 199 aa20.93■□□□□ 0.94
MDM2-220ENST00000496959 GRWD1Q9BQ67 446 aaKnown RBP eCLIP20.61■□□□□ 0.891e-8■■□□□ 11.6
MDM2-220ENST00000496959 SLC4A1APQ9BWU0 796 aaKnown RBP20.6■□□□□ 0.89
MDM2-220ENST00000496959 RNF39Q9H2S5 420 aa20.47■□□□□ 0.87
MDM2-220ENST00000496959 SLC4A2P04920 1241 aa20.35■□□□□ 0.85
MDM2-220ENST00000496959 C1QBPQ07021 282 aaKnown RBP20.25■□□□□ 0.83
MDM2-220ENST00000496959 CACNB1Q02641 598 aaPredicted RBP20.19■□□□□ 0.82
MDM2-220ENST00000496959 U3KPZ7 1027 aaPredicted RBP20.18■□□□□ 0.82
MDM2-220ENST00000496959 FOXD4L1Q9NU39 408 aa20.05■□□□□ 0.8
MDM2-220ENST00000496959 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP19.93■□□□□ 0.78
MDM2-220ENST00000496959 HNRNPUL2Q1KMD3 747 aaKnown RBP19.93■□□□□ 0.78
MDM2-220ENST00000496959 MYCNP04198 464 aaPredicted RBP19.92■□□□□ 0.78
MDM2-220ENST00000496959 ZBTB22O15209 634 aa19.86■□□□□ 0.77
MDM2-220ENST00000496959 SAMD1Q6SPF0 538 aaPredicted RBP19.82■□□□□ 0.76
MDM2-220ENST00000496959 APLP2Q06481 763 aa19.81■□□□□ 0.76
MDM2-220ENST00000496959 CAPN15O75808 1086 aa19.69■□□□□ 0.74
MDM2-220ENST00000496959 SPINK5Q9NQ38 1064 aaPredicted RBP19.69■□□□□ 0.74
MDM2-220ENST00000496959 EHMT2Q96KQ7 1210 aa19.67■□□□□ 0.74
MDM2-220ENST00000496959 CSRNP3Q8WYN3 585 aa19.57■□□□□ 0.72
MDM2-220ENST00000496959 TRHP20396 242 aaPredicted RBP19.53■□□□□ 0.72
MDM2-220ENST00000496959 ZNF219Q9P2Y4 722 aaPredicted RBP19.53■□□□□ 0.72
MDM2-220ENST00000496959 ATXN8OSP0DMR3 200 aa19.39■□□□□ 0.69
MDM2-220ENST00000496959 DSG3P32926 999 aa19.39■□□□□ 0.69
MDM2-220ENST00000496959 ATF5Q9Y2D1 282 aaPredicted RBP19.33■□□□□ 0.68
MDM2-220ENST00000496959 ABCB7O75027 752 aa19.25■□□□□ 0.67
MDM2-220ENST00000496959 POLA2Q14181 598 aa19.13■□□□□ 0.65
MDM2-220ENST00000496959 ZBTB12Q9Y330 459 aaPredicted RBP18.84■□□□□ 0.61
MDM2-220ENST00000496959 FBLN2P98095 1184 aa18.65■□□□□ 0.58
MDM2-220ENST00000496959 RBM42Q9BTD8 480 aaKnown RBP18.55■□□□□ 0.56
MDM2-220ENST00000496959 MKRN4PQ13434 485 aaPredicted RBP18.48■□□□□ 0.55
MDM2-220ENST00000496959 OSCARQ8IYS5 282 aa18.47■□□□□ 0.55
MDM2-220ENST00000496959 SPDYE2BA6NHP3 402 aa18.29■□□□□ 0.52
MDM2-220ENST00000496959 SPDYE6P0CI01 402 aa18.29■□□□□ 0.52
MDM2-220ENST00000496959 SPDYE2Q495Y8 402 aa18.29■□□□□ 0.52
MDM2-220ENST00000496959 AKT1S1Q96B36 256 aa18.23■□□□□ 0.51
MDM2-220ENST00000496959 ZNF692Q9BU19 519 aaPredicted RBP18.18■□□□□ 0.5
MDM2-220ENST00000496959 SSUH2Q9Y2M2 353 aa18.07■□□□□ 0.48
MDM2-220ENST00000496959 REM2Q8IYK8 340 aaPredicted RBP18.03■□□□□ 0.48
MDM2-220ENST00000496959 SPDYE4A6NLX3 237 aa18■□□□□ 0.47
MDM2-220ENST00000496959 PABPN1Q86U42 306 aaKnown RBP eCLIP17.91■□□□□ 0.46
MDM2-220ENST00000496959 CHRDL2Q6WN34 429 aa17.84■□□□□ 0.45
MDM2-220ENST00000496959 SPDYE1Q8NFV5 336 aaPredicted RBP17.83■□□□□ 0.44
MDM2-220ENST00000496959 PITPNM1O00562 1244 aa17.81■□□□□ 0.44
MDM2-220ENST00000496959 CLEC11AQ9Y240 323 aa17.76■□□□□ 0.43
MDM2-220ENST00000496959 FKBP8Q14318 412 aa17.74■□□□□ 0.43
MDM2-220ENST00000496959 POTEHQ6S545 545 aa17.61■□□□□ 0.41
MDM2-220ENST00000496959 PROM2Q8N271 834 aa17.6■□□□□ 0.41
MDM2-220ENST00000496959 STAG3Q9UJ98 1225 aa17.6■□□□□ 0.41
MDM2-220ENST00000496959 PRR29P0C7W0 189 aa17.57■□□□□ 0.4
MDM2-220ENST00000496959 FXR2P51116 673 aaKnown RBP eCLIP17.55■□□□□ 0.4
MDM2-220ENST00000496959 PIP4P2Q8N4L2 257 aa17.54■□□□□ 0.4
MDM2-220ENST00000496959 PRKAR2AP13861 404 aaKnown RBP17.4■□□□□ 0.38
MDM2-220ENST00000496959 CHADLQ6NUI6 762 aa17.31■□□□□ 0.36
MDM2-220ENST00000496959 FBXO3Q9UK99 471 aa17.25■□□□□ 0.35
MDM2-220ENST00000496959 CREBZFQ9NS37 354 aa17.22■□□□□ 0.35
MDM2-220ENST00000496959 FARP1Q9Y4F1 1045 aaPredicted RBP17.14■□□□□ 0.33
MDM2-220ENST00000496959 PLEKHG5O94827 1062 aa17.13■□□□□ 0.33
MDM2-220ENST00000496959 MIER1Q8N108 512 aa17.13■□□□□ 0.33
MDM2-220ENST00000496959 HAX1O00165 279 aa17.1■□□□□ 0.33
MDM2-220ENST00000496959 PLCD3Q8N3E9 789 aa17.08■□□□□ 0.32
MDM2-220ENST00000496959 NPM1P06748 294 aaKnown RBP eCLIP17■□□□□ 0.31
MDM2-220ENST00000496959 MNX1P50219 401 aaPredicted RBP16.98■□□□□ 0.31
MDM2-220ENST00000496959 C19orf67A6NJJ6 358 aa16.96■□□□□ 0.31
MDM2-220ENST00000496959 VASPP50552 380 aaPredicted RBP16.96■□□□□ 0.31
MDM2-220ENST00000496959 ZBTB47Q9UFB7 747 aaPredicted RBP16.94■□□□□ 0.3
MDM2-220ENST00000496959 CD44P16070 742 aaKnown RBP16.88■□□□□ 0.29
MDM2-220ENST00000496959 EVX2Q03828 476 aa16.84■□□□□ 0.29
MDM2-220ENST00000496959 PAK3O75914 559 aaPredicted RBP16.81■□□□□ 0.28
MDM2-220ENST00000496959 SP7Q8TDD2 431 aaPredicted RBP16.81■□□□□ 0.28
MDM2-220ENST00000496959 KLHL34Q8N239 644 aa16.79■□□□□ 0.28
MDM2-220ENST00000496959 ZRANB1Q9UGI0 708 aa16.76■□□□□ 0.27
MDM2-220ENST00000496959 IFNLR1Q8IU57 520 aaPredicted RBP16.68■□□□□ 0.26
MDM2-220ENST00000496959 TSPYL2Q9H2G4 693 aaPredicted RBP16.67■□□□□ 0.26
MDM2-220ENST00000496959 NUBP1P53384 320 aa16.66■□□□□ 0.26
MDM2-220ENST00000496959 RASEFQ8IZ41 740 aa16.65■□□□□ 0.26
MDM2-220ENST00000496959 ZNF579Q8NAF0 562 aaKnown RBP16.63■□□□□ 0.25
MDM2-220ENST00000496959 CLCN6P51797 869 aa16.6■□□□□ 0.25
MDM2-220ENST00000496959 SPOCK2Q92563 424 aa16.59■□□□□ 0.25
Retrieved 100 of 20,778 RNA–protein pairs in 83.8 ms