RNA–Protein interactions for RNA: ENST00000465534.5

CD55-207, Transcript of CD55 molecule (Cromer blood group), humanhuman

TSL 1 (best)

Gene CD55, Length 1,480 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CD55-207ENST00000465534 DDX3XO00571 662 aaKnown RBP eCLIP4.82□□□□□ -1.64
CD55-207ENST00000465534 AURKAO14965 403 aa4.82□□□□□ -1.64
CD55-207ENST00000465534 LAMTOR5O43504 91 aa4.82□□□□□ -1.64
CD55-207ENST00000465534 ZYXQ15942 572 aaKnown RBP4.82□□□□□ -1.64
CD55-207ENST00000465534 PALM2Q8IXS6 379 aa4.82□□□□□ -1.64
CD55-207ENST00000465534 FAM26EQ8N5C1 309 aa4.82□□□□□ -1.64
CD55-207ENST00000465534 PCED1AQ9H1Q7 454 aa4.82□□□□□ -1.64
CD55-207ENST00000465534 ZNRF3Q9ULT6 936 aa4.82□□□□□ -1.64
CD55-207ENST00000465534 ROBO1Q9Y6N7 1651 aa4.82□□□□□ -1.64
CD55-207ENST00000465534 FRMPD1Q5SYB0 1578 aa4.82□□□□□ -1.64
CD55-207ENST00000465534 B4GALT3O60512 393 aa4.81□□□□□ -1.64
CD55-207ENST00000465534 NTRK1P04629 796 aa4.81□□□□□ -1.64
CD55-207ENST00000465534 KLF10Q13118 480 aa4.81□□□□□ -1.64
CD55-207ENST00000465534 TCEAL1Q15170 157 aa4.81□□□□□ -1.64
CD55-207ENST00000465534 DPY19L1Q2PZI1 675 aa4.81□□□□□ -1.64
CD55-207ENST00000465534 ZNF585AQ6P3V2 769 aa4.81□□□□□ -1.64
CD55-207ENST00000465534 CD300LDQ6UXZ3 194 aa4.81□□□□□ -1.64
CD55-207ENST00000465534 ETV3LQ6ZN32 361 aa4.81□□□□□ -1.64
CD55-207ENST00000465534 HS2ST1Q7LGA3 356 aa4.81□□□□□ -1.64
CD55-207ENST00000465534 TAB3Q8N5C8 712 aaPredicted RBP4.81□□□□□ -1.64
CD55-207ENST00000465534 ADCY4Q8NFM4 1077 aa4.81□□□□□ -1.64
CD55-207ENST00000465534 LCORQ96JN0 433 aaPredicted RBP4.81□□□□□ -1.64
CD55-207ENST00000465534 CDK5RAP1Q96SZ6 601 aaKnown RBP4.81□□□□□ -1.64
CD55-207ENST00000465534 PCDH18Q9HCL0 1135 aa4.81□□□□□ -1.64
CD55-207ENST00000465534 CD248Q9HCU0 757 aa4.81□□□□□ -1.64
CD55-207ENST00000465534 DIS3Q9Y2L1 958 aaKnown RBP4.81□□□□□ -1.64
CD55-207ENST00000465534 HS3ST3A1Q9Y663 406 aa4.81□□□□□ -1.64
CD55-207ENST00000465534 POLR1AO95602 1720 aaPredicted RBP4.81□□□□□ -1.64
CD55-207ENST00000465534 ZCCHC11Q5TAX3 1644 aaKnown RBP4.81□□□□□ -1.64
CD55-207ENST00000465534 AFF2P51816 1311 aa4.81□□□□□ -1.64
CD55-207ENST00000465534 ABCA8O94911 1581 aa4.81□□□□□ -1.64
CD55-207ENST00000465534 A0A087WZG4 1122 aa4.81□□□□□ -1.64
CD55-207ENST00000465534 CBFA2T2O43439 604 aa4.81□□□□□ -1.64
CD55-207ENST00000465534 VAMP4O75379 141 aa4.81□□□□□ -1.64
CD55-207ENST00000465534 FUCA1P04066 466 aa4.81□□□□□ -1.64
CD55-207ENST00000465534 SEPHS1P49903 392 aa4.81□□□□□ -1.64
CD55-207ENST00000465534 ITGA1P56199 1179 aa4.81□□□□□ -1.64
CD55-207ENST00000465534 SURF1Q15526 300 aa4.81□□□□□ -1.64
CD55-207ENST00000465534 PRR31Q5SQ13 230 aa4.81□□□□□ -1.64
CD55-207ENST00000465534 UNC5AQ6ZN44 842 aa4.81□□□□□ -1.64
CD55-207ENST00000465534 DEFB132Q7Z7B7 95 aa4.81□□□□□ -1.64
CD55-207ENST00000465534 TTLL6Q8N841 843 aa4.81□□□□□ -1.64
CD55-207ENST00000465534 JMYQ8N9B5 988 aa4.81□□□□□ -1.64
CD55-207ENST00000465534 RNF34Q969K3 372 aa4.81□□□□□ -1.64
CD55-207ENST00000465534 TM9SF2Q99805 663 aa4.81□□□□□ -1.64
CD55-207ENST00000465534 EFCAB5A4FU69 1503 aa4.81□□□□□ -1.64
CD55-207ENST00000465534 SIGLEC1Q9BZZ2 1709 aa4.8□□□□□ -1.64
CD55-207ENST00000465534 UHRF1BP1LA0JNW5 1464 aa4.8□□□□□ -1.64
CD55-207ENST00000465534 RAPGEF2Q9Y4G8 1499 aa4.8□□□□□ -1.64
CD55-207ENST00000465534 RUSC2Q8N2Y8 1516 aa4.8□□□□□ -1.64
CD55-207ENST00000465534 FAM83GA6ND36 823 aa4.8□□□□□ -1.64
CD55-207ENST00000465534 NPEPPSL1A6NEC2 478 aa4.8□□□□□ -1.64
CD55-207ENST00000465534 C2orf71A6NGG8 1288 aa4.8□□□□□ -1.64
CD55-207ENST00000465534 GPR42O15529 346 aa4.8□□□□□ -1.64
CD55-207ENST00000465534 IMPDH2P12268 514 aa4.8□□□□□ -1.64
CD55-207ENST00000465534 RUFY4Q6ZNE9 571 aa4.8□□□□□ -1.64
CD55-207ENST00000465534 DNAJC5GQ8N7S2 189 aa4.8□□□□□ -1.64
CD55-207ENST00000465534 DEF6Q9H4E7 631 aa4.8□□□□□ -1.64
CD55-207ENST00000465534 IGF2BP1Q9NZI8 577 aaKnown RBP eCLIP4.8□□□□□ -1.642e-6■■■■□ 22.4
CD55-207ENST00000465534 ING1Q9UK53 422 aaPredicted RBP4.8□□□□□ -1.64
CD55-207ENST00000465534 ZNF142P52746 1687 aaPredicted RBP4.8□□□□□ -1.64
CD55-207ENST00000465534 PTPRGP23470 1445 aa4.8□□□□□ -1.64
CD55-207ENST00000465534 FHOD3Q2V2M9 1422 aa4.8□□□□□ -1.64
CD55-207ENST00000465534 SHANK3Q9BYB0 1731 aa4.79□□□□□ -1.64
CD55-207ENST00000465534 PAMP19021 973 aa4.79□□□□□ -1.64
CD55-207ENST00000465534 R3HDM1Q15032 1099 aaKnown RBP4.79□□□□□ -1.64
CD55-207ENST00000465534 FERD3LQ96RJ6 166 aa4.79□□□□□ -1.64
CD55-207ENST00000465534 SPON2Q9BUD6 331 aa4.79□□□□□ -1.64
CD55-207ENST00000465534 TRAIPQ9BWF2 469 aa4.79□□□□□ -1.64
CD55-207ENST00000465534 WHRNQ9P202 907 aa4.79□□□□□ -1.64
CD55-207ENST00000465534 ZNF214Q9UL59 606 aaPredicted RBP4.79□□□□□ -1.64
CD55-207ENST00000465534 BACE2Q9Y5Z0 518 aa4.79□□□□□ -1.64
CD55-207ENST00000465534 WDR90Q96KV7 1748 aa4.79□□□□□ -1.64
CD55-207ENST00000465534 SCAF11Q99590 1463 aaKnown RBP4.78□□□□□ -1.64
CD55-207ENST00000465534 NPHP3-ACAD11A0A0J9YXS1 232 aa4.78□□□□□ -1.64
CD55-207ENST00000465534 C7orf72A4D263 438 aa4.78□□□□□ -1.64
CD55-207ENST00000465534 C9orf118A6NHY6 69 aa4.78□□□□□ -1.64
CD55-207ENST00000465534 NPHS1O60500 1241 aa4.78□□□□□ -1.64
CD55-207ENST00000465534 RBM10P98175 930 aaKnown RBP4.78□□□□□ -1.64
CD55-207ENST00000465534 PRAMEF18Q5VWM3 479 aa4.78□□□□□ -1.64
CD55-207ENST00000465534 FBXW10Q5XX13 1052 aa4.78□□□□□ -1.64
CD55-207ENST00000465534 PLEKHH3Q7Z736 793 aa4.78□□□□□ -1.64
CD55-207ENST00000465534 ZC3H18Q86VM9 953 aaKnown RBP4.78□□□□□ -1.64
CD55-207ENST00000465534 CIR1Q86X95 450 aaPredicted RBP4.78□□□□□ -1.64
CD55-207ENST00000465534 MIB1Q86YT6 1006 aa4.78□□□□□ -1.64
CD55-207ENST00000465534 DCP2Q8IU60 420 aaKnown RBP4.78□□□□□ -1.64
CD55-207ENST00000465534 KIAA0825Q8IV33 1275 aa4.78□□□□□ -1.64
CD55-207ENST00000465534 DNERQ8NFT8 737 aa4.78□□□□□ -1.64
CD55-207ENST00000465534 IGDCC4Q8TDY8 1250 aa4.78□□□□□ -1.64
CD55-207ENST00000465534 SNX27Q96L92 541 aa4.78□□□□□ -1.64
CD55-207ENST00000465534 FGD6Q6ZV73 1430 aa4.78□□□□□ -1.64
CD55-207ENST00000465534 ZFYVE16Q7Z3T8 1539 aa4.78□□□□□ -1.64
CD55-207ENST00000465534 SHPRHQ149N8 1683 aa4.78□□□□□ -1.64
CD55-207ENST00000465534 EP400Q96L91 3159 aa4.78□□□□□ -1.64
CD55-207ENST00000465534 SGSM2O43147 1006 aa4.77□□□□□ -1.65
CD55-207ENST00000465534 CYP1A1P04798 512 aaPredicted RBP4.77□□□□□ -1.65
CD55-207ENST00000465534 GUCY2CP25092 1073 aa4.77□□□□□ -1.65
CD55-207ENST00000465534 RGS19P49795 217 aa4.77□□□□□ -1.65
CD55-207ENST00000465534 PLEKHO2Q8TD55 490 aa4.77□□□□□ -1.65
CD55-207ENST00000465534 HAUS7Q99871 368 aa4.77□□□□□ -1.65
Retrieved 100 of 20,778 RNA–protein pairs in 59.3 ms