RNA–Protein interactions for RNA: ENST00000453705.1

BRCC3-208, Transcript of BRCA1/BRCA2-containing complex subunit 3, humanhuman

TSL 5

Gene BRCC3, Length 2,694 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BRCC3-208ENST00000453705 TTC39AQ5SRH9 613 aa8.75□□□□□ -1.01
BRCC3-208ENST00000453705 NXNQ6DKJ4 435 aa8.75□□□□□ -1.01
BRCC3-208ENST00000453705 NFXL1Q6ZNB6 911 aa8.75□□□□□ -1.01
BRCC3-208ENST00000453705 DNAJB7Q7Z6W7 309 aaPredicted RBP8.75□□□□□ -1.01
BRCC3-208ENST00000453705 LSMEM1Q8N8F7 131 aa8.75□□□□□ -1.01
BRCC3-208ENST00000453705 FAM81BQ96LP2 452 aa8.75□□□□□ -1.01
BRCC3-208ENST00000453705 ZSCAN31Q96LW9 406 aaPredicted RBP8.75□□□□□ -1.01
BRCC3-208ENST00000453705 TLR7Q9NYK1 1049 aaKnown RBP8.75□□□□□ -1.01
BRCC3-208ENST00000453705 MSRB2Q9Y3D2 182 aa8.75□□□□□ -1.01
BRCC3-208ENST00000453705 CCDC88AQ3V6T2 1871 aa8.74□□□□□ -1.01
BRCC3-208ENST00000453705 TNS1Q9HBL0 1735 aaKnown RBP8.74□□□□□ -1.01
BRCC3-208ENST00000453705 CFAP99D6REC4 459 aa8.74□□□□□ -1.01
BRCC3-208ENST00000453705 OFD1O75665 1012 aa8.74□□□□□ -1.01
BRCC3-208ENST00000453705 NTSR2O95665 410 aa8.74□□□□□ -1.01
BRCC3-208ENST00000453705 ATP6V1AP38606 617 aa8.74□□□□□ -1.01
BRCC3-208ENST00000453705 KRT32Q14532 448 aa8.74□□□□□ -1.01
BRCC3-208ENST00000453705 HLFQ16534 295 aa8.74□□□□□ -1.01
BRCC3-208ENST00000453705 ZMYM1Q5SVZ6 1142 aa8.74□□□□□ -1.01
BRCC3-208ENST00000453705 PI16Q6UXB8 463 aa8.74□□□□□ -1.01
BRCC3-208ENST00000453705 KIAA1211Q6ZU35 1233 aa8.74□□□□□ -1.01
BRCC3-208ENST00000453705 TEKT1Q969V4 418 aa8.74□□□□□ -1.01
BRCC3-208ENST00000453705 C1orf74Q96LT6 269 aa8.74□□□□□ -1.01
BRCC3-208ENST00000453705 PALD1Q9ULE6 856 aa8.74□□□□□ -1.01
BRCC3-208ENST00000453705 C2CD2Q9Y426 696 aa8.74□□□□□ -1.01
BRCC3-208ENST00000453705 WDR19Q8NEZ3 1342 aa8.74□□□□□ -1.01
BRCC3-208ENST00000453705 MAP3K6O95382 1288 aa8.74□□□□□ -1.01
BRCC3-208ENST00000453705 CCDC159P0C7I6 412 aa8.74□□□□□ -1.01
BRCC3-208ENST00000453705 ALAS1P13196 640 aa8.74□□□□□ -1.01
BRCC3-208ENST00000453705 TYRP1P17643 537 aa8.74□□□□□ -1.01
BRCC3-208ENST00000453705 CTNNA1P35221 906 aaKnown RBP8.74□□□□□ -1.01
BRCC3-208ENST00000453705 CD86P42081 329 aa8.74□□□□□ -1.01
BRCC3-208ENST00000453705 GABREP78334 506 aa8.74□□□□□ -1.01
BRCC3-208ENST00000453705 MLLT1Q03111 559 aaPredicted RBP8.74□□□□□ -1.01
BRCC3-208ENST00000453705 NMIQ13287 307 aaPredicted RBP8.74□□□□□ -1.01
BRCC3-208ENST00000453705 CCDC57Q2TAC2 916 aa8.74□□□□□ -1.01
BRCC3-208ENST00000453705 SKOR2Q2VWA4 1001 aaPredicted RBP8.74□□□□□ -1.01
BRCC3-208ENST00000453705 AFAP1L2Q8N4X5 818 aa8.74□□□□□ -1.01
BRCC3-208ENST00000453705 DCLK2Q8N568 766 aa8.74□□□□□ -1.01
BRCC3-208ENST00000453705 SRRTQ9BXP5 876 aaKnown RBP8.74□□□□□ -1.01
BRCC3-208ENST00000453705 OSGEPQ9NPF4 335 aa8.74□□□□□ -1.01
BRCC3-208ENST00000453705 SH2B1Q9NRF2 756 aaPredicted RBP8.74□□□□□ -1.01
BRCC3-208ENST00000453705 TNRC6CQ9HCJ0 1690 aaKnown RBP8.74□□□□□ -1.01
BRCC3-208ENST00000453705 ANKRD18BA2A2Z9 1011 aa8.73□□□□□ -1.01
BRCC3-208ENST00000453705 PSMA5P28066 241 aa8.73□□□□□ -1.01
BRCC3-208ENST00000453705 HOXD12P35452 270 aa8.73□□□□□ -1.01
BRCC3-208ENST00000453705 PIP4K2AP48426 406 aaPredicted RBP8.73□□□□□ -1.01
BRCC3-208ENST00000453705 DGKGP49619 791 aa8.73□□□□□ -1.01
BRCC3-208ENST00000453705 MRPS35P82673 323 aaKnown RBP8.73□□□□□ -1.01
BRCC3-208ENST00000453705 KCNC4Q03721 635 aa8.73□□□□□ -1.01
BRCC3-208ENST00000453705 IFIT5Q13325 482 aaKnown RBP8.73□□□□□ -1.01
BRCC3-208ENST00000453705 SF3B3Q15393 1217 aaKnown RBP8.73□□□□□ -1.01
BRCC3-208ENST00000453705 SHQ1Q6PI26 577 aaKnown RBP8.73□□□□□ -1.01
BRCC3-208ENST00000453705 TOGARAM2Q6ZUX3 1019 aa8.73□□□□□ -1.01
BRCC3-208ENST00000453705 GBP4Q96PP9 640 aa8.73□□□□□ -1.01
BRCC3-208ENST00000453705 GSDMAQ96QA5 445 aa8.73□□□□□ -1.01
BRCC3-208ENST00000453705 ALPK1Q96QP1 1244 aa8.73□□□□□ -1.01
BRCC3-208ENST00000453705 DBNDD2Q9BQY9 259 aa8.73□□□□□ -1.01
BRCC3-208ENST00000453705 ADAM33Q9BZ11 813 aa8.73□□□□□ -1.01
BRCC3-208ENST00000453705 TSPY26PQ9H489 355 aa8.73□□□□□ -1.01
BRCC3-208ENST00000453705 NCOA5Q9HCD5 579 aaKnown RBP8.73□□□□□ -1.01
BRCC3-208ENST00000453705 KBTBD4Q9NVX7 518 aa8.73□□□□□ -1.01
BRCC3-208ENST00000453705 ZMAT5Q9UDW3 170 aaKnown RBP8.73□□□□□ -1.01
BRCC3-208ENST00000453705 MCM8Q9UJA3 840 aa8.73□□□□□ -1.01
BRCC3-208ENST00000453705 JAG2Q9Y219 1238 aa8.73□□□□□ -1.01
BRCC3-208ENST00000453705 TNKSO95271 1327 aa8.73□□□□□ -1.01
BRCC3-208ENST00000453705 GABRDO14764 452 aa8.73□□□□□ -1.01
BRCC3-208ENST00000453705 MUSKO15146 869 aa8.73□□□□□ -1.01
BRCC3-208ENST00000453705 TAF5LO75529 589 aa8.73□□□□□ -1.01
BRCC3-208ENST00000453705 SMAD4Q13485 552 aaKnown RBP8.73□□□□□ -1.01
BRCC3-208ENST00000453705 SAFBQ15424 915 aaKnown RBP eCLIP8.73□□□□□ -1.01
BRCC3-208ENST00000453705 TUSC1Q2TAM9 212 aa8.73□□□□□ -1.01
BRCC3-208ENST00000453705 C2orf27AQ580R0 203 aa8.73□□□□□ -1.01
BRCC3-208ENST00000453705 RNF20Q5VTR2 975 aa8.73□□□□□ -1.01
BRCC3-208ENST00000453705 NIM1KQ8IY84 436 aa8.73□□□□□ -1.01
BRCC3-208ENST00000453705 KLHL23Q8NBE8 558 aa8.73□□□□□ -1.01
BRCC3-208ENST00000453705 CRB3Q9BUF7 120 aa8.73□□□□□ -1.01
BRCC3-208ENST00000453705 INCENPQ9NQS7 918 aa8.73□□□□□ -1.01
BRCC3-208ENST00000453705 C6orf203Q9P0P8 240 aaPredicted RBP8.73□□□□□ -1.01
BRCC3-208ENST00000453705 PNMA8BQ9ULN7 279 aaPredicted RBP8.73□□□□□ -1.01
BRCC3-208ENST00000453705 RPS6KA4O75676 772 aa8.72□□□□□ -1.01
BRCC3-208ENST00000453705 CHKAP35790 457 aa8.72□□□□□ -1.01
BRCC3-208ENST00000453705 NSUN2Q08J23 767 aaKnown RBP eCLIP8.72□□□□□ -1.01
BRCC3-208ENST00000453705 ANKRD1Q15327 319 aa8.72□□□□□ -1.01
BRCC3-208ENST00000453705 MCMDC2Q4G0Z9 681 aa8.72□□□□□ -1.01
BRCC3-208ENST00000453705 FAM182BQ5T319 152 aa8.72□□□□□ -1.01
BRCC3-208ENST00000453705 CEP68Q76N32 757 aa8.72□□□□□ -1.01
BRCC3-208ENST00000453705 TMX3Q96JJ7 454 aa8.72□□□□□ -1.01
BRCC3-208ENST00000453705 UTP14AQ9BVJ6 771 aaKnown RBP8.72□□□□□ -1.01
BRCC3-208ENST00000453705 AGXT2Q9BYV1 514 aa8.72□□□□□ -1.01
BRCC3-208ENST00000453705 ADAMTS1Q9UHI8 967 aa8.72□□□□□ -1.01
BRCC3-208ENST00000453705 HERC5Q9UII4 1024 aaKnown RBP8.72□□□□□ -1.01
BRCC3-208ENST00000453705 CACNA1SQ13698 1873 aa8.72□□□□□ -1.01
BRCC3-208ENST00000453705 ABHD14A-ACY1A0A1B0GW23 586 aa8.72□□□□□ -1.01
BRCC3-208ENST00000453705 K7ENM7 598 aa8.72□□□□□ -1.01
BRCC3-208ENST00000453705 UQCRFS1P1P0C7P4 283 aa8.72□□□□□ -1.01
BRCC3-208ENST00000453705 ATP6V1E1P36543 226 aa8.72□□□□□ -1.01
BRCC3-208ENST00000453705 NLRP12P59046 1061 aa8.72□□□□□ -1.01
BRCC3-208ENST00000453705 POLR2FP61218 127 aaKnown RBP8.72□□□□□ -1.01
BRCC3-208ENST00000453705 STRN3Q13033 797 aa8.72□□□□□ -1.01
BRCC3-208ENST00000453705 TCEA2Q15560 299 aa8.72□□□□□ -1.01
Retrieved 100 of 20,778 RNA–protein pairs in 78 ms