RNA–Protein interactions for RNA: ENST00000371817.7

COL5A1-201, Transcript of collagen type V alpha 1 chain, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene COL5A1, Length 8,471 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL5A1-201ENST00000371817 OATP04181 439 aa16.44■□□□□ 0.22
COL5A1-201ENST00000371817 TRIM16LQ309B1 348 aa16.44■□□□□ 0.22
COL5A1-201ENST00000371817 TTLL7Q6ZT98 887 aa16.44■□□□□ 0.22
COL5A1-201ENST00000371817 POGZQ7Z3K3 1410 aa16.44■□□□□ 0.22
COL5A1-201ENST00000371817 PYROXD1Q8WU10 500 aa16.44■□□□□ 0.22
COL5A1-201ENST00000371817 TTC25Q96NG3 672 aa16.44■□□□□ 0.22
COL5A1-201ENST00000371817 TGS1Q96RS0 853 aaKnown RBP16.44■□□□□ 0.22
COL5A1-201ENST00000371817 IFNA8P32881 189 aa16.44■□□□□ 0.22
COL5A1-201ENST00000371817 KRT40Q6A162 431 aa16.44■□□□□ 0.22
COL5A1-201ENST00000371817 MYLK4Q86YV6 388 aaPredicted RBP16.44■□□□□ 0.22
COL5A1-201ENST00000371817 STX19Q8N4C7 294 aa16.44■□□□□ 0.22
COL5A1-201ENST00000371817 PANX2Q96RD6 677 aa16.44■□□□□ 0.22
COL5A1-201ENST00000371817 SOWAHDA6NJG2 315 aa16.44■□□□□ 0.22
COL5A1-201ENST00000371817 AARSP49588 968 aaKnown RBP eCLIP16.44■□□□□ 0.22
COL5A1-201ENST00000371817 DMPKQ09013 629 aa16.44■□□□□ 0.22
COL5A1-201ENST00000371817 CC2D1AQ6P1N0 951 aaPredicted RBP16.44■□□□□ 0.22
COL5A1-201ENST00000371817 TRIM67Q6ZTA4 783 aa16.44■□□□□ 0.22
COL5A1-201ENST00000371817 PRPF38AQ8NAV1 312 aaKnown RBP16.44■□□□□ 0.22
COL5A1-201ENST00000371817 CNBD2Q96M20 576 aa16.44■□□□□ 0.22
COL5A1-201ENST00000371817 UBAP1Q9NZ09 502 aa16.44■□□□□ 0.22
COL5A1-201ENST00000371817 SSH2Q76I76 1423 aa16.44■□□□□ 0.22
COL5A1-201ENST00000371817 RDH13Q8NBN7 331 aa16.44■□□□□ 0.22
COL5A1-201ENST00000371817 SNX25Q9H3E2 840 aa16.44■□□□□ 0.22
COL5A1-201ENST00000371817 ADA2Q9NZK5 511 aa16.44■□□□□ 0.22
COL5A1-201ENST00000371817 SCAF11Q99590 1463 aaKnown RBP16.44■□□□□ 0.22
COL5A1-201ENST00000371817 CYTH1Q15438 398 aa16.44■□□□□ 0.22
COL5A1-201ENST00000371817 CNOT6LQ96LI5 555 aaKnown RBP16.44■□□□□ 0.22
COL5A1-201ENST00000371817 SYNJ2O15056 1496 aa16.44■□□□□ 0.22
COL5A1-201ENST00000371817 TMEM247A6NEH6 219 aa16.44■□□□□ 0.22
COL5A1-201ENST00000371817 LUZP2Q86TE4 346 aa16.44■□□□□ 0.22
COL5A1-201ENST00000371817 REXO1Q8N1G1 1221 aaKnown RBP16.44■□□□□ 0.22
COL5A1-201ENST00000371817 TAB3Q8N5C8 712 aaPredicted RBP16.44■□□□□ 0.22
COL5A1-201ENST00000371817 ZNF513Q8N8E2 541 aaPredicted RBP16.44■□□□□ 0.22
COL5A1-201ENST00000371817 PANK4Q9NVE7 773 aa16.44■□□□□ 0.22
COL5A1-201ENST00000371817 MEFVO15553 781 aaPredicted RBP16.43■□□□□ 0.22
COL5A1-201ENST00000371817 C4BPBP20851 252 aa16.43■□□□□ 0.22
COL5A1-201ENST00000371817 CAPRIN1Q14444 709 aaKnown RBP16.43■□□□□ 0.22
COL5A1-201ENST00000371817 C4orf50Q6ZRC1 276 aa16.43■□□□□ 0.22
COL5A1-201ENST00000371817 IKBKBO14920 756 aa16.43■□□□□ 0.22
COL5A1-201ENST00000371817 ME3Q16798 604 aa16.43■□□□□ 0.22
COL5A1-201ENST00000371817 LMBR1LQ6UX01 489 aa16.43■□□□□ 0.22
COL5A1-201ENST00000371817 ANKRD13CQ8N6S4 541 aa16.43■□□□□ 0.22
COL5A1-201ENST00000371817 GRAMD1AQ96CP6 724 aa16.43■□□□□ 0.22
COL5A1-201ENST00000371817 OPTNQ96CV9 577 aa16.43■□□□□ 0.22
COL5A1-201ENST00000371817 ZBTB10Q96DT7 871 aa16.43■□□□□ 0.22
COL5A1-201ENST00000371817 EMILIN1Q9Y6C2 1016 aa16.43■□□□□ 0.22
COL5A1-201ENST00000371817 HSPA4LO95757 839 aa16.43■□□□□ 0.22
COL5A1-201ENST00000371817 KRR1Q13601 381 aaKnown RBP16.43■□□□□ 0.22
COL5A1-201ENST00000371817 DAB2IPQ5VWQ8 1189 aa16.43■□□□□ 0.22
COL5A1-201ENST00000371817 SPDYE2BA6NHP3 402 aa16.43■□□□□ 0.22
COL5A1-201ENST00000371817 SPDYE6P0CI01 402 aa16.43■□□□□ 0.22
COL5A1-201ENST00000371817 TFCP2Q12800 502 aa16.43■□□□□ 0.22
COL5A1-201ENST00000371817 TMC5Q6UXY8 1006 aa16.43■□□□□ 0.22
COL5A1-201ENST00000371817 NDEL1Q9GZM8 345 aa16.43■□□□□ 0.22
COL5A1-201ENST00000371817 PARVBQ9HBI1 364 aa16.43■□□□□ 0.22
COL5A1-201ENST00000371817 DIAPH2O60879 1101 aa16.43■□□□□ 0.22
COL5A1-201ENST00000371817 ECM2O94769 699 aaPredicted RBP16.43■□□□□ 0.22
COL5A1-201ENST00000371817 VCPP55072 806 aaKnown RBP16.43■□□□□ 0.22
COL5A1-201ENST00000371817 BTBD6Q96KE9 485 aa16.43■□□□□ 0.22
COL5A1-201ENST00000371817 FTOQ9C0B1 505 aaKnown RBP eCLIP16.43■□□□□ 0.22
COL5A1-201ENST00000371817 ORC4O43929 436 aa16.43■□□□□ 0.22
COL5A1-201ENST00000371817 MAPK4P31152 587 aa16.43■□□□□ 0.22
COL5A1-201ENST00000371817 AFPP02771 609 aaKnown RBP16.42■□□□□ 0.22
COL5A1-201ENST00000371817 DNAAF3Q8N9W5 541 aa16.42■□□□□ 0.22
COL5A1-201ENST00000371817 OMA1Q96E52 524 aa16.42■□□□□ 0.22
COL5A1-201ENST00000371817 CCND1P24385 295 aa16.42■□□□□ 0.22
COL5A1-201ENST00000371817 FAM47EQ6ZV65 393 aa16.42■□□□□ 0.22
COL5A1-201ENST00000371817 RPS6KC1Q96S38 1066 aa16.42■□□□□ 0.22
COL5A1-201ENST00000371817 TMEM245Q9H330 911 aa16.42■□□□□ 0.22
COL5A1-201ENST00000371817 GOLGA8IPA6NC78 632 aa16.42■□□□□ 0.22
COL5A1-201ENST00000371817 NOSTRINQ8IVI9 506 aa16.42■□□□□ 0.22
COL5A1-201ENST00000371817 ADNPQ9H2P0 1102 aa16.42■□□□□ 0.22
COL5A1-201ENST00000371817 GPCPD1Q9NPB8 672 aa16.42■□□□□ 0.22
COL5A1-201ENST00000371817 CCPG1Q9ULG6 757 aa16.42■□□□□ 0.22
COL5A1-201ENST00000371817 TTC17Q96AE7 1141 aa16.42■□□□□ 0.22
COL5A1-201ENST00000371817 CARD9Q9H257 536 aa16.42■□□□□ 0.22
COL5A1-201ENST00000371817 DNAJC17Q9NVM6 304 aaKnown RBP16.42■□□□□ 0.22
COL5A1-201ENST00000371817 ITGB1BP2Q9UKP3 347 aa16.42■□□□□ 0.22
COL5A1-201ENST00000371817 ANGPTL8Q6UXH0 198 aa16.42■□□□□ 0.22
COL5A1-201ENST00000371817 ADCY7P51828 1080 aa16.42■□□□□ 0.22
COL5A1-201ENST00000371817 GPBP1Q86WP2 473 aa16.42■□□□□ 0.22
COL5A1-201ENST00000371817 NCAPG2Q86XI2 1143 aa16.42■□□□□ 0.22
COL5A1-201ENST00000371817 CFAP36Q96G28 342 aa16.42■□□□□ 0.22
COL5A1-201ENST00000371817 ASPSCR1Q9BZE9 553 aa16.42■□□□□ 0.22
COL5A1-201ENST00000371817 GTPBP6O43824 516 aaPredicted RBP16.41■□□□□ 0.22
COL5A1-201ENST00000371817 HAUS5O94927 633 aa16.41■□□□□ 0.22
COL5A1-201ENST00000371817 PPM1KQ8N3J5 372 aa16.41■□□□□ 0.22
COL5A1-201ENST00000371817 NHEJ1Q9H9Q4 299 aaPredicted RBP16.41■□□□□ 0.22
COL5A1-201ENST00000371817 KIF9Q9HAQ2 790 aa16.41■□□□□ 0.22
COL5A1-201ENST00000371817 BLOC1S6Q9UL45 172 aa16.41■□□□□ 0.22
COL5A1-201ENST00000371817 WAPLQ7Z5K2 1190 aa16.41■□□□□ 0.22
COL5A1-201ENST00000371817 TM6SF1Q9BZW5 370 aa16.41■□□□□ 0.22
COL5A1-201ENST00000371817 EPN3Q9H201 632 aa16.41■□□□□ 0.22
COL5A1-201ENST00000371817 OLFML3Q9NRN5 406 aa16.41■□□□□ 0.22
COL5A1-201ENST00000371817 KRT37O76014 449 aa16.41■□□□□ 0.22
COL5A1-201ENST00000371817 NDUFA10O95299 355 aa16.41■□□□□ 0.22
COL5A1-201ENST00000371817 MOCS3O95396 460 aa16.41■□□□□ 0.22
COL5A1-201ENST00000371817 GSNP06396 782 aa16.41■□□□□ 0.22
COL5A1-201ENST00000371817 KIF23Q02241 960 aaPredicted RBP16.41■□□□□ 0.22
COL5A1-201ENST00000371817 MYH9P35579 1960 aaKnown RBP16.41■□□□□ 0.22
Retrieved 100 of 20,778 RNA–protein pairs in 64.5 ms