RNA–Protein interactions for RNA: ENST00000317201.6

HOXA3-201, Transcript of homeobox A3, humanhuman

APPRIS P1 TSL 5 BASIC

Gene HOXA3, Length 2,761 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HOXA3-201ENST00000317201 EGFRP00533 1210 aa16.35■□□□□ 0.21
HOXA3-201ENST00000317201 LONP1P36776 959 aaKnown RBP16.35■□□□□ 0.21
HOXA3-201ENST00000317201 ARHGAP27Q6ZUM4 889 aa16.35■□□□□ 0.21
HOXA3-201ENST00000317201 TMC6Q7Z403 805 aa16.35■□□□□ 0.21
HOXA3-201ENST00000317201 CUL5Q93034 780 aa16.35■□□□□ 0.21
HOXA3-201ENST00000317201 GPRC5DQ9NZD1 345 aa16.35■□□□□ 0.21
HOXA3-201ENST00000317201 HACL1Q9UJ83 578 aa16.35■□□□□ 0.21
HOXA3-201ENST00000317201 PPP2R3BQ9Y5P8 575 aa16.35■□□□□ 0.21
HOXA3-201ENST00000317201 RTN2O75298 545 aa16.34■□□□□ 0.21
HOXA3-201ENST00000317201 PYGLP06737 847 aa16.34■□□□□ 0.21
HOXA3-201ENST00000317201 SLC16A2P36021 539 aa16.34■□□□□ 0.21
HOXA3-201ENST00000317201 GRIN1Q05586 938 aa16.34■□□□□ 0.21
HOXA3-201ENST00000317201 CRYMQ14894 314 aa16.34■□□□□ 0.21
HOXA3-201ENST00000317201 SYDE2Q5VT97 1194 aa16.34■□□□□ 0.21
HOXA3-201ENST00000317201 TRIM65Q6PJ69 517 aa16.34■□□□□ 0.21
HOXA3-201ENST00000317201 HDXQ7Z353 690 aa16.34■□□□□ 0.21
HOXA3-201ENST00000317201 NEK8Q86SG6 692 aa16.34■□□□□ 0.21
HOXA3-201ENST00000317201 RASGRP4Q8TDF6 673 aa16.34■□□□□ 0.21
HOXA3-201ENST00000317201 COA7Q96BR5 231 aa16.34■□□□□ 0.21
HOXA3-201ENST00000317201 TUBE1Q9UJT0 475 aa16.34■□□□□ 0.21
HOXA3-201ENST00000317201 EBAG9O00559 213 aa16.34■□□□□ 0.21
HOXA3-201ENST00000317201 MCM7P33993 719 aa16.34■□□□□ 0.21
HOXA3-201ENST00000317201 CDC37Q16543 378 aaPredicted RBP16.34■□□□□ 0.21
HOXA3-201ENST00000317201 INF2Q27J81 1249 aa16.34■□□□□ 0.21
HOXA3-201ENST00000317201 QRICH1Q2TAL8 776 aa16.34■□□□□ 0.21
HOXA3-201ENST00000317201 SAMD7Q7Z3H4 446 aa16.34■□□□□ 0.21
HOXA3-201ENST00000317201 VCPKMTQ9H867 229 aa16.34■□□□□ 0.21
HOXA3-201ENST00000317201 ATAD5Q96QE3 1844 aa16.34■□□□□ 0.21
HOXA3-201ENST00000317201 CTNND1O60716 968 aaKnown RBP16.33■□□□□ 0.21
HOXA3-201ENST00000317201 IQCB1Q15051 598 aa16.33■□□□□ 0.21
HOXA3-201ENST00000317201 CDAN1Q8IWY9 1227 aa16.33■□□□□ 0.21
HOXA3-201ENST00000317201 ERCC4Q92889 916 aaPredicted RBP16.33■□□□□ 0.21
HOXA3-201ENST00000317201 FAM107BQ9H098 131 aa16.33■□□□□ 0.21
HOXA3-201ENST00000317201 ABCB6Q9NP58 842 aa16.33■□□□□ 0.21
HOXA3-201ENST00000317201 PREPLQ4J6C6 727 aaPredicted RBP16.33■□□□□ 0.2
HOXA3-201ENST00000317201 TBC1D10BQ4KMP7 808 aaPredicted RBP16.33■□□□□ 0.2
HOXA3-201ENST00000317201 BEND6Q5SZJ8 279 aaPredicted RBP16.33■□□□□ 0.2
HOXA3-201ENST00000317201 DCAF15Q66K64 600 aa16.33■□□□□ 0.2
HOXA3-201ENST00000317201 MIGA2Q7L4E1 593 aa16.33■□□□□ 0.2
HOXA3-201ENST00000317201 NAP1L4Q99733 375 aaKnown RBP16.33■□□□□ 0.2
HOXA3-201ENST00000317201 AMNQ9BXJ7 453 aa16.33■□□□□ 0.2
HOXA3-201ENST00000317201 DEFB129Q9H1M3 183 aa16.33■□□□□ 0.2
HOXA3-201ENST00000317201 ACBD3Q9H3P7 528 aa16.33■□□□□ 0.2
HOXA3-201ENST00000317201 CHUKO15111 745 aa16.32■□□□□ 0.2
HOXA3-201ENST00000317201 EIF3JO75822 258 aaKnown RBP16.32■□□□□ 0.2
HOXA3-201ENST00000317201 RPS6KA3P51812 740 aa16.32■□□□□ 0.2
HOXA3-201ENST00000317201 RWDD2BP57060 319 aa16.32■□□□□ 0.2
HOXA3-201ENST00000317201 GOLGA8FQ08AF8 430 aa16.32■□□□□ 0.2
HOXA3-201ENST00000317201 GOLGA8DPQ0D2H9 430 aa16.32■□□□□ 0.2
HOXA3-201ENST00000317201 TBC1D25Q3MII6 688 aa16.32■□□□□ 0.2
HOXA3-201ENST00000317201 BPIFA3Q9BQP9 254 aa16.32■□□□□ 0.2
HOXA3-201ENST00000317201 NAT10Q9H0A0 1025 aaKnown RBP16.32■□□□□ 0.2
HOXA3-201ENST00000317201 PUF60Q9UHX1 559 aaKnown RBP16.32■□□□□ 0.2
HOXA3-201ENST00000317201 TMEM232C9JQI7 657 aa16.32■□□□□ 0.2
HOXA3-201ENST00000317201 SFPQP23246 707 aaKnown RBP eCLIP16.32■□□□□ 0.21e-6■■■■□ 20.5
HOXA3-201ENST00000317201 STAT2P52630 851 aa16.32■□□□□ 0.2
HOXA3-201ENST00000317201 MDM2Q00987 491 aaPredicted RBP16.32■□□□□ 0.2
HOXA3-201ENST00000317201 LONRF3Q496Y0 759 aa16.32■□□□□ 0.2
HOXA3-201ENST00000317201 FAM160B2Q86V87 743 aa16.32■□□□□ 0.2
HOXA3-201ENST00000317201 CHURC1Q8WUH1 139 aa16.32■□□□□ 0.2
HOXA3-201ENST00000317201 PHLPP2Q6ZVD8 1323 aa16.32■□□□□ 0.2
HOXA3-201ENST00000317201 CCDC151A5D8V7 595 aa16.32■□□□□ 0.2
HOXA3-201ENST00000317201 PPP1R12BO60237 982 aaPredicted RBP16.32■□□□□ 0.2
HOXA3-201ENST00000317201 ECE1P42892 770 aa16.32■□□□□ 0.2
HOXA3-201ENST00000317201 E2F5Q15329 346 aa16.32■□□□□ 0.2
HOXA3-201ENST00000317201 PTPN21Q16825 1174 aa16.32■□□□□ 0.2
HOXA3-201ENST00000317201 ACER1Q8TDN7 264 aa16.32■□□□□ 0.2
HOXA3-201ENST00000317201 WDR24Q96S15 920 aa16.32■□□□□ 0.2
HOXA3-201ENST00000317201 PSTPIP2Q9H939 334 aa16.32■□□□□ 0.2
HOXA3-201ENST00000317201 A1CFQ9NQ94 594 aaKnown RBP16.32■□□□□ 0.2
HOXA3-201ENST00000317201 PITPNM2Q9BZ72 1349 aa16.31■□□□□ 0.2
HOXA3-201ENST00000317201 NT5DC1Q5TFE4 455 aa16.31■□□□□ 0.2
HOXA3-201ENST00000317201 KLHL23Q8NBE8 558 aa16.31■□□□□ 0.2
HOXA3-201ENST00000317201 TBCKQ8TEA7 893 aa16.31■□□□□ 0.2
HOXA3-201ENST00000317201 RIN2Q8WYP3 895 aaPredicted RBP16.31■□□□□ 0.2
HOXA3-201ENST00000317201 SYMPKQ92797 1274 aaKnown RBP16.31■□□□□ 0.2
HOXA3-201ENST00000317201 AK8Q96MA6 479 aa16.31■□□□□ 0.2
HOXA3-201ENST00000317201 ZNF112Q9UJU3 913 aa16.31■□□□□ 0.2
HOXA3-201ENST00000317201 PCDHA1Q9Y5I3 950 aa16.31■□□□□ 0.2
HOXA3-201ENST00000317201 VWA3AA6NCI4 1184 aa16.31■□□□□ 0.2
HOXA3-201ENST00000317201 POLR2DO15514 142 aaKnown RBP16.31■□□□□ 0.2
HOXA3-201ENST00000317201 ACTN4O43707 911 aaKnown RBP16.31■□□□□ 0.2
HOXA3-201ENST00000317201 RAD21O60216 631 aa16.31■□□□□ 0.2
HOXA3-201ENST00000317201 RNF40O75150 1001 aa16.31■□□□□ 0.2
HOXA3-201ENST00000317201 SNUPNO95149 360 aaKnown RBP16.31■□□□□ 0.2
HOXA3-201ENST00000317201 SSBP05455 408 aaKnown RBP eCLIP16.31■□□□□ 0.2
HOXA3-201ENST00000317201 TXLNAP40222 546 aa16.31■□□□□ 0.2
HOXA3-201ENST00000317201 NLRP12P59046 1061 aa16.31■□□□□ 0.2
HOXA3-201ENST00000317201 GNG11P61952 73 aa16.31■□□□□ 0.2
HOXA3-201ENST00000317201 DTHD1Q6ZMT9 781 aa16.31■□□□□ 0.2
HOXA3-201ENST00000317201 RSRC2Q7L4I2 434 aaKnown RBP16.31■□□□□ 0.2
HOXA3-201ENST00000317201 ARMCX6Q7L4S7 300 aa16.31■□□□□ 0.2
HOXA3-201ENST00000317201 SPDL1Q96EA4 605 aa16.31■□□□□ 0.2
HOXA3-201ENST00000317201 PNKPQ96T60 521 aa16.31■□□□□ 0.2
HOXA3-201ENST00000317201 TACO1Q9BSH4 297 aaKnown RBP16.31■□□□□ 0.2
HOXA3-201ENST00000317201 SYT17Q9BSW7 474 aa16.31■□□□□ 0.2
HOXA3-201ENST00000317201 COQ9O75208 318 aa16.3■□□□□ 0.2
HOXA3-201ENST00000317201 FAM163BP0C2L3 166 aa16.3■□□□□ 0.2
HOXA3-201ENST00000317201 USP4Q13107 963 aa16.3■□□□□ 0.2
HOXA3-201ENST00000317201 AP3B2Q13367 1082 aa16.3■□□□□ 0.2
Retrieved 100 of 20,778 RNA–protein pairs in 146.5 ms