RNA–Protein interactions for RNA: YLR396C

VPS33, Transcript of ATP-binding protein that is a subunit of the HOPS and CORVET complexes, yeastyeast

Gene VPS33, Length 2,076 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
VPS33YLR396C DSL1P53847 754 aa3.33□□□□□ -1.88
VPS33YLR396C ESBP6P53918 673 aa3.33□□□□□ -1.88
VPS33YLR396C YKR005CQ02203 525 aa3.33□□□□□ -1.88
VPS33YLR396C GIR2Q03768 265 aaPredicted RBP3.33□□□□□ -1.88
VPS33YLR396C GRC3Q07845 632 aa3.33□□□□□ -1.88
VPS33YLR396C TEN1Q07921 160 aa3.33□□□□□ -1.88
VPS33YLR396C MLH2Q07980 695 aa3.33□□□□□ -1.88
VPS33YLR396C TAF10Q12030 206 aa3.33□□□□□ -1.88
VPS33YLR396C RCN2Q12044 265 aa3.33□□□□□ -1.88
VPS33YLR396C YPT6Q99260 215 aa3.33□□□□□ -1.88
VPS33YLR396C MF(ALPHA)1P01149 165 aa3.32□□□□□ -1.88
VPS33YLR396C PUT2P07275 575 aa3.32□□□□□ -1.88
VPS33YLR396C RPS24AP0CX31 135 aaKnown RBP3.32□□□□□ -1.88
VPS33YLR396C RPS24BP0CX32 135 aaKnown RBP3.32□□□□□ -1.88
VPS33YLR396C RPB8P20436 146 aa3.32□□□□□ -1.88
VPS33YLR396C CKI1P20485 582 aa3.32□□□□□ -1.88
VPS33YLR396C SSE2P32590 693 aaKnown RBP3.32□□□□□ -1.88
VPS33YLR396C NUP133P36161 1157 aa3.32□□□□□ -1.88
VPS33YLR396C DBP8P38719 431 aa3.32□□□□□ -1.88
VPS33YLR396C CCT2P39076 527 aaKnown RBP3.32□□□□□ -1.88
VPS33YLR396C TIF4631P39935 952 aaKnown RBP3.32□□□□□ -1.88
VPS33YLR396C RGI2P40188 164 aa3.32□□□□□ -1.88
VPS33YLR396C SYG1P40528 902 aa3.32□□□□□ -1.88
VPS33YLR396C SEC27P41811 889 aaKnown RBP3.32□□□□□ -1.88
VPS33YLR396C EPL1P43572 832 aa3.32□□□□□ -1.88
VPS33YLR396C IRC8P47046 822 aa3.32□□□□□ -1.88
VPS33YLR396C PYK2P52489 506 aaKnown RBP3.32□□□□□ -1.88
VPS33YLR396C YNL181WP53878 407 aa3.32□□□□□ -1.88
VPS33YLR396C TIM10P87108 93 aa3.32□□□□□ -1.88
VPS33YLR396C VTI1Q04338 217 aa3.32□□□□□ -1.88
VPS33YLR396C SOV1Q04748 898 aa3.32□□□□□ -1.88
VPS33YLR396C TSR2Q06672 205 aaKnown RBP3.32□□□□□ -1.88
VPS33YLR396C YDL218WQ07629 317 aa3.32□□□□□ -1.88
VPS33YLR396C FMP40Q08968 688 aaPredicted RBP3.32□□□□□ -1.88
VPS33YLR396C RTP1Q12751 981 aa3.32□□□□□ -1.88
VPS33YLR396C ARG81P05085 880 aa3.32□□□□□ -1.88
VPS33YLR396C RPL22AP05749 121 aaKnown RBP3.32□□□□□ -1.88
VPS33YLR396C THR4P16120 514 aaKnown RBP3.32□□□□□ -1.88
VPS33YLR396C REC107P21651 314 aa3.32□□□□□ -1.88
VPS33YLR396C YCR051WP25631 222 aa3.32□□□□□ -1.88
VPS33YLR396C CMK1P27466 446 aaKnown RBP3.32□□□□□ -1.88
VPS33YLR396C NIP1P32497 812 aaKnown RBP3.32□□□□□ -1.88
VPS33YLR396C YBL055CP34220 418 aaPredicted RBP3.32□□□□□ -1.88
VPS33YLR396C PIM1P36775 1133 aa3.32□□□□□ -1.88
VPS33YLR396C SPP381P38282 291 aaPredicted RBP3.32□□□□□ -1.88
VPS33YLR396C SHC1P39000 512 aa3.32□□□□□ -1.88
VPS33YLR396C NPR2P39923 615 aa3.32□□□□□ -1.88
VPS33YLR396C FYV8P46949 817 aaKnown RBP3.32□□□□□ -1.88
VPS33YLR396C MLC1P53141 149 aa3.32□□□□□ -1.88
VPS33YLR396C YGR127WP53275 312 aa3.32□□□□□ -1.88
VPS33YLR396C MPS1P54199 764 aa3.32□□□□□ -1.88
VPS33YLR396C NUP100Q02629 959 aa3.32□□□□□ -1.88
VPS33YLR396C MSC1Q03104 513 aa3.32□□□□□ -1.88
VPS33YLR396C EKI1Q03764 534 aa3.32□□□□□ -1.88
VPS33YLR396C PPM1Q04081 328 aa3.32□□□□□ -1.88
VPS33YLR396C SXM1Q04175 944 aaKnown RBP3.32□□□□□ -1.88
VPS33YLR396C URH1Q04179 340 aa3.32□□□□□ -1.88
VPS33YLR396C MGR3Q04472 501 aa3.32□□□□□ -1.88
VPS33YLR396C YLR287CQ05881 355 aa3.32□□□□□ -1.88
VPS33YLR396C DSE3Q08729 430 aa3.32□□□□□ -1.88
VPS33YLR396C SGT2Q12118 346 aaKnown RBP3.32□□□□□ -1.88
VPS33YLR396C RSF2P46974 1380 aa3.32□□□□□ -1.88
VPS33YLR396C GCN4P03069 281 aa3.31□□□□□ -1.88
VPS33YLR396C CBS1P14066 229 aa3.31□□□□□ -1.88
VPS33YLR396C BUD5P25300 642 aaPredicted RBP3.31□□□□□ -1.88
VPS33YLR396C IMG1P25626 169 aa3.31□□□□□ -1.88
VPS33YLR396C YBR144CP34215 104 aa3.31□□□□□ -1.88
VPS33YLR396C YKL100CP34248 587 aa3.31□□□□□ -1.88
VPS33YLR396C YPK3P38070 525 aa3.31□□□□□ -1.88
VPS33YLR396C OSH3P38713 996 aaKnown RBP3.31□□□□□ -1.88
VPS33YLR396C CTM1P38818 585 aa3.31□□□□□ -1.88
VPS33YLR396C PET100P38958 111 aa3.31□□□□□ -1.88
VPS33YLR396C ERP2P39704 215 aa3.31□□□□□ -1.88
VPS33YLR396C ESL1P40456 1118 aa3.31□□□□□ -1.88
VPS33YLR396C YNL320WP42840 284 aa3.31□□□□□ -1.88
VPS33YLR396C YNL234WP53857 426 aa3.31□□□□□ -1.88
VPS33YLR396C YLH47Q06493 454 aa3.31□□□□□ -1.88
VPS33YLR396C BUD7Q08754 746 aa3.31□□□□□ -1.88
VPS33YLR396C SNF3P10870 884 aa3.31□□□□□ -1.88
VPS33YLR396C PEP3P27801 918 aa3.31□□□□□ -1.88
VPS33YLR396C SIN4P32259 974 aa3.31□□□□□ -1.88
VPS33YLR396C EFB1P32471 206 aaKnown RBP3.31□□□□□ -1.88
VPS33YLR396C SSE1P32589 693 aaKnown RBP3.31□□□□□ -1.88
VPS33YLR396C GCG1P32656 232 aaKnown RBP3.31□□□□□ -1.88
VPS33YLR396C MRE11P32829 692 aa3.31□□□□□ -1.88
VPS33YLR396C PDR3P33200 976 aa3.31□□□□□ -1.88
VPS33YLR396C AFG3P39925 761 aa3.31□□□□□ -1.88
VPS33YLR396C NDE1P40215 560 aa3.31□□□□□ -1.88
VPS33YLR396C GPD2P41911 440 aaKnown RBP3.31□□□□□ -1.88
VPS33YLR396C BRO1P48582 844 aa3.31□□□□□ -1.88
VPS33YLR396C HOS2P53096 452 aaPredicted RBP3.31□□□□□ -1.88
VPS33YLR396C BTN2P53286 410 aa3.31□□□□□ -1.88
VPS33YLR396C RSM23Q01163 450 aa3.31□□□□□ -1.88
VPS33YLR396C RPT6Q01939 405 aaKnown RBP3.31□□□□□ -1.88
VPS33YLR396C EBS1Q03466 884 aaKnown RBP3.31□□□□□ -1.88
VPS33YLR396C YMR114CQ04471 368 aaKnown RBP3.31□□□□□ -1.88
VPS33YLR396C YMR034CQ05131 434 aaPredicted RBP3.31□□□□□ -1.88
VPS33YLR396C MRD1Q06106 887 aaKnown RBP3.31□□□□□ -1.88
VPS33YLR396C ECM30Q06673 1274 aa3.31□□□□□ -1.88
VPS33YLR396C NSE1Q07913 336 aa3.31□□□□□ -1.88
Retrieved 100 of 5,963 RNA–protein pairs in 15 ms