RNA–Protein interactions for RNA: YJL197W

UBP12, Transcript of Ubiquitin-specific protease, yeastyeast

Gene UBP12, Length 3,765 nt, Biotype protein coding.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
UBP12YJL197W MSS116P15424 664 aaKnown RBP3.66□□□□□ -1.82
UBP12YJL197W UGA1P17649 471 aa3.66□□□□□ -1.82
UBP12YJL197W ECM25P32525 599 aa3.66□□□□□ -1.82
UBP12YJL197W COT1P32798 439 aa3.66□□□□□ -1.82
UBP12YJL197W REC114P32841 428 aa3.66□□□□□ -1.82
UBP12YJL197W LST4P34239 828 aa3.66□□□□□ -1.82
UBP12YJL197W STN1P38960 494 aa3.66□□□□□ -1.82
UBP12YJL197W ECM30Q06673 1274 aa3.66□□□□□ -1.82
UBP12YJL197W SAR1P20606 190 aaKnown RBP3.66□□□□□ -1.82
UBP12YJL197W VPS3P23643 1011 aa3.66□□□□□ -1.82
UBP12YJL197W YKL070WP36087 169 aa3.66□□□□□ -1.82
UBP12YJL197W DUG2P38149 878 aa3.66□□□□□ -1.82
UBP12YJL197W KAP104P38217 918 aaKnown RBP3.66□□□□□ -1.82
UBP12YJL197W CSI1Q04368 295 aa3.66□□□□□ -1.82
UBP12YJL197W APC4Q04601 652 aa3.66□□□□□ -1.82
UBP12YJL197W RRG8Q06109 277 aa3.66□□□□□ -1.82
UBP12YJL197W YPR078CQ06813 372 aa3.66□□□□□ -1.82
UBP12YJL197W YOL159CQ08300 171 aa3.66□□□□□ -1.82
UBP12YJL197W RAD51P25454 400 aa3.65□□□□□ -1.82
UBP12YJL197W SAC1P32368 623 aaKnown RBP3.65□□□□□ -1.82
UBP12YJL197W RPT5P33297 434 aaKnown RBP3.65□□□□□ -1.82
UBP12YJL197W MIA40P36046 403 aa3.65□□□□□ -1.82
UBP12YJL197W MRPL37P36532 105 aa3.65□□□□□ -1.82
UBP12YJL197W PAC11P40960 533 aa3.65□□□□□ -1.82
UBP12YJL197W LOH1P47055 219 aa3.65□□□□□ -1.82
UBP12YJL197W PNC1P53184 216 aaKnown RBP3.65□□□□□ -1.82
UBP12YJL197W MDM30Q05930 598 aa3.65□□□□□ -1.82
UBP12YJL197W ADE5,7P07244 802 aaKnown RBP3.65□□□□□ -1.82
UBP12YJL197W RAP1P11938 827 aa3.65□□□□□ -1.82
UBP12YJL197W DPH5P32469 300 aaPredicted RBP3.65□□□□□ -1.82
UBP12YJL197W GMH1P36125 273 aa3.65□□□□□ -1.82
UBP12YJL197W AIM20P40451 204 aa3.65□□□□□ -1.82
UBP12YJL197W PMT6P42934 759 aa3.65□□□□□ -1.82
UBP12YJL197W VOA1P53262 265 aa3.65□□□□□ -1.82
UBP12YJL197W RNT1Q02555 471 aa3.65□□□□□ -1.82
UBP12YJL197W PCL8Q08966 492 aa3.65□□□□□ -1.82
UBP12YJL197W LSP1Q12230 341 aaKnown RBP3.65□□□□□ -1.82
UBP12YJL197W COX3P00420 269 aa3.65□□□□□ -1.83
UBP12YJL197W RPS13P05756 151 aaKnown RBP3.65□□□□□ -1.83
UBP12YJL197W SEC63P14906 663 aa3.65□□□□□ -1.83
UBP12YJL197W CLB2P24869 491 aa3.65□□□□□ -1.83
UBP12YJL197W ERG4P25340 473 aa3.65□□□□□ -1.83
UBP12YJL197W RHB1P25378 209 aa3.65□□□□□ -1.83
UBP12YJL197W PSO2P30620 661 aa3.65□□□□□ -1.83
UBP12YJL197W END3P39013 349 aa3.65□□□□□ -1.83
UBP12YJL197W YGL114WP53134 725 aa3.65□□□□□ -1.83
UBP12YJL197W YLR173WQ06247 608 aa3.65□□□□□ -1.83
UBP12YJL197W RPS10AQ08745 105 aaPredicted RBP3.65□□□□□ -1.83
UBP12YJL197W NCE102Q12207 173 aaRIP-Chip data3.65□□□□□ -1.83not detected
UBP12YJL197W RBD2Q12270 262 aa3.65□□□□□ -1.83
UBP12YJL197W AHA1Q12449 350 aaKnown RBP3.65□□□□□ -1.83
UBP12YJL197W DCP1Q12517 231 aaPredicted RBP3.65□□□□□ -1.83
UBP12YJL197W TRP3P00937 484 aa3.64□□□□□ -1.83
UBP12YJL197W MRPL9P31334 269 aa3.64□□□□□ -1.83
UBP12YJL197W PUB1P32588 453 aaKnown RBP RIP-Chip data3.64□□□□□ -1.83not detected
UBP12YJL197W PEX32P38292 413 aa3.64□□□□□ -1.83
UBP12YJL197W SWC5P38326 303 aa3.64□□□□□ -1.83
UBP12YJL197W SPC97P38863 823 aa3.64□□□□□ -1.83
UBP12YJL197W GAT2P40209 560 aa3.64□□□□□ -1.83
UBP12YJL197W ATM1P40416 690 aa3.64□□□□□ -1.83
UBP12YJL197W MNN10P50108 393 aaKnown RBP3.64□□□□□ -1.83
UBP12YJL197W MND1P53102 219 aa3.64□□□□□ -1.83
UBP12YJL197W PIB2P53191 635 aa3.64□□□□□ -1.83
UBP12YJL197W CPR8P53728 308 aa3.64□□□□□ -1.83
UBP12YJL197W RSM23Q01163 450 aa3.64□□□□□ -1.83
UBP12YJL197W BCP1Q06338 283 aa3.64□□□□□ -1.83
UBP12YJL197W VAC14Q06708 880 aa3.64□□□□□ -1.83
UBP12YJL197W THP1Q08231 455 aa3.64□□□□□ -1.83
UBP12YJL197W ATP10P18496 279 aa3.64□□□□□ -1.83
UBP12YJL197W YCL068CP25593 260 aa3.64□□□□□ -1.83
UBP12YJL197W SPT10P35208 640 aa3.64□□□□□ -1.83
UBP12YJL197W YKL023WP36103 277 aaKnown RBP3.64□□□□□ -1.83
UBP12YJL197W PXL1P36166 706 aa3.64□□□□□ -1.83
UBP12YJL197W RRN10P38204 145 aa3.64□□□□□ -1.83
UBP12YJL197W SPP381P38282 291 aaPredicted RBP3.64□□□□□ -1.83
UBP12YJL197W YHR122WP38829 231 aa3.64□□□□□ -1.83
UBP12YJL197W YHC3P47040 408 aa3.64□□□□□ -1.83
UBP12YJL197W YJR011CP47086 261 aaPredicted RBP3.64□□□□□ -1.83
UBP12YJL197W CGR1P53188 120 aa3.64□□□□□ -1.83
UBP12YJL197W YNL050CP53952 270 aa3.64□□□□□ -1.83
UBP12YJL197W SMX3P54999 86 aaPredicted RBP3.64□□□□□ -1.83
UBP12YJL197W APM1Q00776 475 aaPredicted RBP3.64□□□□□ -1.83
UBP12YJL197W YOR365CQ08844 703 aa3.64□□□□□ -1.83
UBP12YJL197W UNG1P12887 359 aa3.64□□□□□ -1.83
UBP12YJL197W MER1P16523 270 aa3.64□□□□□ -1.83
UBP12YJL197W GID7P25569 745 aa3.64□□□□□ -1.83
UBP12YJL197W YKR073CP36153 106 aa3.64□□□□□ -1.83
UBP12YJL197W MNL1P38888 796 aa3.64□□□□□ -1.83
UBP12YJL197W CDC40P40968 455 aaPredicted RBP3.64□□□□□ -1.83
UBP12YJL197W SPG5P42933 373 aa3.64□□□□□ -1.83
UBP12YJL197W RPS10BP46784 105 aaKnown RBP3.64□□□□□ -1.83
UBP12YJL197W RTT102P53330 157 aa3.64□□□□□ -1.83
UBP12YJL197W ARO10Q06408 635 aa3.64□□□□□ -1.83
UBP12YJL197W TY3A-GQ12173 290 aa3.64□□□□□ -1.83
UBP12YJL197W PUF2Q12221 1075 aaKnown RBP RIP-Chip data3.64□□□□□ -1.83not detected
UBP12YJL197W TY3A-IQ99219 290 aa3.64□□□□□ -1.83
UBP12YJL197W NRP1P32770 719 aaKnown RBP RIP-Chip data3.63□□□□□ -1.83not detected
UBP12YJL197W GPI16P38875 610 aa3.63□□□□□ -1.83
UBP12YJL197W NDC80P40460 691 aa3.63□□□□□ -1.83
UBP12YJL197W TDA10P42938 290 aa3.63□□□□□ -1.83
Retrieved 100 of 5,963 RNA–protein pairs in 92.5 ms