RNA–Protein interactions for RNA: YHR172W

SPC97, Transcript of Component of the microtubule-nucleating Tub4p (gamma-tubulin) complex, yeastyeast

Gene SPC97, Length 2,472 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
SPC97YHR172W PRR1P28708 518 aa5.2□□□□□ -1.58
SPC97YHR172W RIM1P32445 135 aaKnown RBP5.2□□□□□ -1.58
SPC97YHR172W MNN2P38069 597 aa5.2□□□□□ -1.58
SPC97YHR172W DPB11P47027 764 aaPredicted RBP5.2□□□□□ -1.58
SPC97YHR172W NCE103P53615 221 aa5.2□□□□□ -1.58
SPC97YHR172W NOP13P53883 403 aaKnown RBP RIP-Chip data5.2□□□□□ -1.58not detected
SPC97YHR172W EAF7P53911 425 aaKnown RBP5.2□□□□□ -1.58
SPC97YHR172W SNA4Q07549 140 aa5.2□□□□□ -1.58
SPC97YHR172W YLR040CQ07988 224 aa5.2□□□□□ -1.58
SPC97YHR172W INP53Q12271 1107 aa5.2□□□□□ -1.58
SPC97YHR172W YOR012WQ12351 137 aa5.2□□□□□ -1.58
SPC97YHR172W RRD2Q12461 358 aa5.2□□□□□ -1.58
SPC97YHR172W RPL27AP0C2H6 136 aaKnown RBP5.2□□□□□ -1.58
SPC97YHR172W RPL27BP0C2H7 136 aaKnown RBP5.2□□□□□ -1.58
SPC97YHR172W ERG11P10614 530 aa5.2□□□□□ -1.58
SPC97YHR172W RHB1P25378 209 aa5.2□□□□□ -1.58
SPC97YHR172W PSO2P30620 661 aa5.2□□□□□ -1.58
SPC97YHR172W ARA1P38115 344 aa5.2□□□□□ -1.58
SPC97YHR172W SAK1P38990 1142 aa5.2□□□□□ -1.58
SPC97YHR172W YNL195CP40168 261 aa5.2□□□□□ -1.58
SPC97YHR172W YIL001WP40560 513 aa5.2□□□□□ -1.58
SPC97YHR172W SAD1P43589 448 aa5.2□□□□□ -1.58
SPC97YHR172W RPS7BP48164 190 aaKnown RBP5.2□□□□□ -1.58
SPC97YHR172W SLI1P53304 468 aa5.2□□□□□ -1.58
SPC97YHR172W ARG5,6Q01217 863 aa5.2□□□□□ -1.58
SPC97YHR172W IPK1Q06667 281 aa5.2□□□□□ -1.58
SPC97YHR172W MCM21Q06675 368 aa5.2□□□□□ -1.58
SPC97YHR172W RCL1Q08096 367 aaPredicted RBP5.2□□□□□ -1.58
SPC97YHR172W ELG1Q12050 791 aa5.2□□□□□ -1.58
SPC97YHR172W VAM3Q12241 283 aa5.2□□□□□ -1.58
SPC97YHR172W TRP3P00937 484 aa5.19□□□□□ -1.58
SPC97YHR172W TUB3P09734 445 aaKnown RBP5.19□□□□□ -1.58
SPC97YHR172W MRP13P12686 339 aa5.19□□□□□ -1.58
SPC97YHR172W KRS1P15180 591 aaKnown RBP5.19□□□□□ -1.58
SPC97YHR172W ERS1P17261 260 aa5.19□□□□□ -1.58
SPC97YHR172W MET16P18408 261 aaPredicted RBP5.19□□□□□ -1.58
SPC97YHR172W ADE1P27616 306 aa5.19□□□□□ -1.58
SPC97YHR172W YPS1P32329 569 aa5.19□□□□□ -1.58
SPC97YHR172W FRE1P32791 686 aa5.19□□□□□ -1.58
SPC97YHR172W SKG6P32900 734 aaPredicted RBP5.19□□□□□ -1.58
SPC97YHR172W YHR078WP38799 552 aa5.19□□□□□ -1.58
SPC97YHR172W ERG10P41338 398 aaKnown RBP5.19□□□□□ -1.58
SPC97YHR172W YJL118WP47022 219 aa5.19□□□□□ -1.58
SPC97YHR172W UBX6P47049 396 aa5.19□□□□□ -1.58
SPC97YHR172W OCA2P53949 197 aa5.19□□□□□ -1.58
SPC97YHR172W MRPL35Q06678 367 aa5.19□□□□□ -1.58
SPC97YHR172W PAM18Q07914 168 aa5.19□□□□□ -1.58
SPC97YHR172W RPS3P05750 240 aaKnown RBP5.19□□□□□ -1.58
SPC97YHR172W MATALPHA2P0CY08 210 aa5.19□□□□□ -1.58
SPC97YHR172W HMLALPHA2P0CY09 210 aa5.19□□□□□ -1.58
SPC97YHR172W TUP1P16649 713 aa5.19□□□□□ -1.58
SPC97YHR172W PEX3P28795 441 aa5.19□□□□□ -1.58
SPC97YHR172W TPS2P31688 896 aaKnown RBP5.19□□□□□ -1.58
SPC97YHR172W DOA1P36037 715 aa5.19□□□□□ -1.58
SPC97YHR172W FHL1P39521 936 aa5.19□□□□□ -1.58
SPC97YHR172W YAR1P46683 200 aa5.19□□□□□ -1.58
SPC97YHR172W FMP33P46998 180 aa5.19□□□□□ -1.58
SPC97YHR172W COX18P53239 316 aa5.19□□□□□ -1.58
SPC97YHR172W PXR1P53335 271 aaPredicted RBP5.19□□□□□ -1.58
SPC97YHR172W RNT1Q02555 471 aa5.19□□□□□ -1.58
SPC97YHR172W SHS1Q07657 551 aa5.19□□□□□ -1.58
SPC97YHR172W DIS3Q08162 1001 aaKnown RBP5.19□□□□□ -1.58
SPC97YHR172W GPH1P06738 902 aaKnown RBP5.18□□□□□ -1.58
SPC97YHR172W PMR1P13586 950 aa5.18□□□□□ -1.58
SPC97YHR172W RPL24BP24000 155 aaKnown RBP5.18□□□□□ -1.58
SPC97YHR172W DCG1P32460 244 aa5.18□□□□□ -1.58
SPC97YHR172W CTF8P38877 133 aa5.18□□□□□ -1.58
SPC97YHR172W NDC80P40460 691 aa5.18□□□□□ -1.58
SPC97YHR172W AGE2P40529 298 aa5.18□□□□□ -1.58
SPC97YHR172W EFM6P53970 246 aa5.18□□□□□ -1.58
SPC97YHR172W MRP51Q02950 344 aa5.18□□□□□ -1.58
SPC97YHR172W DOT1Q04089 582 aaKnown RBP5.18□□□□□ -1.58
SPC97YHR172W YDR222WQ04925 415 aa5.18□□□□□ -1.58
SPC97YHR172W SDO1Q07953 250 aaKnown RBP5.18□□□□□ -1.58
SPC97YHR172W YOR223WQ12015 292 aa5.18□□□□□ -1.58
SPC97YHR172W PRS5Q12265 496 aaKnown RBP5.18□□□□□ -1.58
SPC97YHR172W PAA1Q12447 191 aaKnown RBP5.18□□□□□ -1.58
SPC97YHR172W NCB2Q92317 146 aa5.18□□□□□ -1.58
SPC97YHR172W SEY1Q99287 776 aa5.18□□□□□ -1.58
SPC97YHR172W ALG1P16661 449 aa5.18□□□□□ -1.58
SPC97YHR172W HXT2P23585 541 aa5.18□□□□□ -1.58
SPC97YHR172W GSH1P32477 678 aa5.18□□□□□ -1.58
SPC97YHR172W YBR144CP34215 104 aa5.18□□□□□ -1.58
SPC97YHR172W YMR262WP38430 313 aa5.18□□□□□ -1.58
SPC97YHR172W CBR1P38626 284 aaKnown RBP5.18□□□□□ -1.58
SPC97YHR172W ALP1P38971 573 aa5.18□□□□□ -1.58
SPC97YHR172W PLB1P39105 664 aa5.18□□□□□ -1.58
SPC97YHR172W BUR6P40096 142 aa5.18□□□□□ -1.58
SPC97YHR172W PFA3P42836 336 aa5.18□□□□□ -1.58
SPC97YHR172W IBA57P47158 497 aa5.18□□□□□ -1.58
SPC97YHR172W KAP114P53067 1004 aa5.18□□□□□ -1.58
SPC97YHR172W YAT1P80235 687 aa5.18□□□□□ -1.58
SPC97YHR172W TPP1Q03796 238 aa5.18□□□□□ -1.58
SPC97YHR172W HED1Q03937 162 aa5.18□□□□□ -1.58
SPC97YHR172W YMR310CQ04867 317 aaPredicted RBP5.18□□□□□ -1.58
SPC97YHR172W YOL075CQ08234 1294 aa5.18□□□□□ -1.58
SPC97YHR172W PUF2Q12221 1075 aaKnown RBP RIP-Chip data5.18□□□□□ -1.58not detected
SPC97YHR172W YOR029WQ12243 111 aa5.18□□□□□ -1.58
SPC97YHR172W POM34Q12445 299 aa5.18□□□□□ -1.58
SPC97YHR172W CDC33P07260 213 aaKnown RBP5.17□□□□□ -1.58
Retrieved 100 of 5,963 RNA–protein pairs in 58.2 ms