RNA–Protein interactions for RNA: YHR077C

NMD2, Transcript of Protein involved in the nonsense-mediated mRNA decay (NMD) pathway, yeastyeast

Gene NMD2, Length 3,270 nt, Biotype protein coding.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
NMD2YHR077C RIB3Q99258 208 aa2.9□□□□□ -1.95
NMD2YHR077C AI3P03877 415 aa2.9□□□□□ -1.95
NMD2YHR077C HTA1P04911 132 aaKnown RBP2.9□□□□□ -1.95
NMD2YHR077C FBA1P14540 359 aaKnown RBP2.9□□□□□ -1.95
NMD2YHR077C SIR1P21691 654 aa2.9□□□□□ -1.95
NMD2YHR077C CRM1P30822 1084 aaKnown RBP2.9□□□□□ -1.95
NMD2YHR077C ARB1P40024 610 aaKnown RBP2.9□□□□□ -1.95
NMD2YHR077C GTO1P48239 356 aa2.9□□□□□ -1.95
NMD2YHR077C SNF12P53628 566 aa2.9□□□□□ -1.95
NMD2YHR077C CAF120P53836 1060 aa2.9□□□□□ -1.95
NMD2YHR077C YPR109WQ06104 294 aa2.9□□□□□ -1.95
NMD2YHR077C ATG17Q06410 417 aa2.9□□□□□ -1.95
NMD2YHR077C FMP45Q07651 309 aa2.9□□□□□ -1.95
NMD2YHR077C RCN2Q12044 265 aa2.9□□□□□ -1.95
NMD2YHR077C RRP42Q12277 265 aaPredicted RBP2.9□□□□□ -1.95
NMD2YHR077C MMP1Q12372 583 aa2.9□□□□□ -1.95
NMD2YHR077C YCL012CQ8J0M4 134 aa2.9□□□□□ -1.95
NMD2YHR077C TIM9O74700 87 aa2.89□□□□□ -1.95
NMD2YHR077C SIR3P06701 978 aa2.89□□□□□ -1.95
NMD2YHR077C SGV1P23293 657 aaKnown RBP2.89□□□□□ -1.95
NMD2YHR077C PHO84P25297 587 aaKnown RBP2.89□□□□□ -1.95
NMD2YHR077C TRX3P25372 127 aa2.89□□□□□ -1.95
NMD2YHR077C ACH1P32316 526 aa2.89□□□□□ -1.95
NMD2YHR077C VMA6P32366 345 aaKnown RBP2.89□□□□□ -1.95
NMD2YHR077C HXT4P32467 576 aa2.89□□□□□ -1.95
NMD2YHR077C SEC17P32602 292 aa2.89□□□□□ -1.95
NMD2YHR077C COX13P32799 129 aa2.89□□□□□ -1.95
NMD2YHR077C SEC66P33754 206 aa2.89□□□□□ -1.95
NMD2YHR077C YPK3P38070 525 aa2.89□□□□□ -1.95
NMD2YHR077C SEA4P38164 1038 aa2.89□□□□□ -1.95
NMD2YHR077C BMT2P38278 337 aa2.89□□□□□ -1.95
NMD2YHR077C AXL2P38928 823 aa2.89□□□□□ -1.95
NMD2YHR077C HXT6P39003 570 aaKnown RBP2.89□□□□□ -1.95
NMD2YHR077C HXT7P39004 570 aa2.89□□□□□ -1.95
NMD2YHR077C SSN3P39073 555 aa2.89□□□□□ -1.95
NMD2YHR077C UTP18P40362 594 aaPredicted RBP2.89□□□□□ -1.95
NMD2YHR077C CAK1P43568 368 aaPredicted RBP2.89□□□□□ -1.95
NMD2YHR077C STE24P47154 453 aa2.89□□□□□ -1.95
NMD2YHR077C GCV1P48015 400 aa2.89□□□□□ -1.95
NMD2YHR077C RBL2P48606 106 aaKnown RBP2.89□□□□□ -1.95
NMD2YHR077C MPS2P53159 387 aa2.89□□□□□ -1.95
NMD2YHR077C ART5P53244 586 aaKnown RBP2.89□□□□□ -1.95
NMD2YHR077C TUB4P53378 473 aa2.89□□□□□ -1.95
NMD2YHR077C UGO1Q03327 502 aa2.89□□□□□ -1.95
NMD2YHR077C SEG1Q04279 960 aa2.89□□□□□ -1.95
NMD2YHR077C BCH1Q05029 724 aa2.89□□□□□ -1.95
NMD2YHR077C RSC3Q06639 885 aa2.89□□□□□ -1.95
NMD2YHR077C THP1Q08231 455 aa2.89□□□□□ -1.95
NMD2YHR077C BUD7Q08754 746 aa2.89□□□□□ -1.95
NMD2YHR077C IES3Q12345 250 aa2.89□□□□□ -1.95
NMD2YHR077C GTT2Q12390 233 aa2.89□□□□□ -1.95
NMD2YHR077C HRP1Q99383 534 aaKnown RBP2.89□□□□□ -1.95
NMD2YHR077C THP2O13539 261 aaKnown RBP2.89□□□□□ -1.95
NMD2YHR077C PRT1P06103 763 aaKnown RBP2.89□□□□□ -1.95
NMD2YHR077C FPR1P20081 114 aaKnown RBP2.89□□□□□ -1.95
NMD2YHR077C FAR1P21268 830 aa2.89□□□□□ -1.95
NMD2YHR077C PUP3P25451 205 aaKnown RBP2.89□□□□□ -1.95
NMD2YHR077C PEX34P25584 144 aa2.89□□□□□ -1.95
NMD2YHR077C SYP1P25623 870 aaKnown RBP2.89□□□□□ -1.95
NMD2YHR077C RSC6P25632 483 aa2.89□□□□□ -1.95
NMD2YHR077C ITR2P30606 609 aa2.89□□□□□ -1.95
NMD2YHR077C AAR2P32357 355 aaPredicted RBP2.89□□□□□ -1.95
NMD2YHR077C ATP11P32453 318 aa2.89□□□□□ -1.95
NMD2YHR077C NTR2P36118 322 aaPredicted RBP2.89□□□□□ -1.95
NMD2YHR077C RCK1P38622 512 aa2.89□□□□□ -1.95
NMD2YHR077C MTG2P38860 518 aa2.89□□□□□ -1.95
NMD2YHR077C IPT1P38954 527 aa2.89□□□□□ -1.95
NMD2YHR077C DOT6P40059 670 aaKnown RBP2.89□□□□□ -1.95
NMD2YHR077C LAS21P40367 830 aa2.89□□□□□ -1.95
NMD2YHR077C STB1P42845 420 aa2.89□□□□□ -1.95
NMD2YHR077C DSL1P53847 754 aa2.89□□□□□ -1.95
NMD2YHR077C YNL181WP53878 407 aa2.89□□□□□ -1.95
NMD2YHR077C SWP1Q02795 286 aa2.89□□□□□ -1.95
NMD2YHR077C CTK1Q03957 528 aaKnown RBP2.89□□□□□ -1.95
NMD2YHR077C PEX12Q04370 399 aa2.89□□□□□ -1.95
NMD2YHR077C MRX10Q05648 414 aa2.89□□□□□ -1.95
NMD2YHR077C VPS74Q06385 345 aa2.89□□□□□ -1.95
NMD2YHR077C SWA2Q06677 668 aa2.89□□□□□ -1.95
NMD2YHR077C PUS7Q08647 676 aaKnown RBP2.89□□□□□ -1.95
NMD2YHR077C SAM4Q08985 325 aaKnown RBP2.89□□□□□ -1.95
NMD2YHR077C RPN6Q12377 434 aa2.89□□□□□ -1.95
NMD2YHR077C MHF2Q3E829 80 aa2.89□□□□□ -1.95
NMD2YHR077C RPS9AO13516 197 aaKnown RBP2.88□□□□□ -1.95
NMD2YHR077C HMG2P12684 1045 aa2.88□□□□□ -1.95
NMD2YHR077C UNG1P12887 359 aa2.88□□□□□ -1.95
NMD2YHR077C KSS1P14681 368 aa2.88□□□□□ -1.95
NMD2YHR077C RDS2P19541 446 aaKnown RBP2.88□□□□□ -1.95
NMD2YHR077C PPZ1P26570 692 aa2.88□□□□□ -1.95
NMD2YHR077C PEX3P28795 441 aa2.88□□□□□ -1.95
NMD2YHR077C CAT2P32796 670 aaKnown RBP2.88□□□□□ -1.95
NMD2YHR077C PRP18P33411 251 aaPredicted RBP2.88□□□□□ -1.95
NMD2YHR077C SPO23P33757 523 aa2.88□□□□□ -1.95
NMD2YHR077C WSC4P38739 605 aa2.88□□□□□ -1.95
NMD2YHR077C APE4P38821 490 aa2.88□□□□□ -1.95
NMD2YHR077C MNN9P39107 395 aaKnown RBP2.88□□□□□ -1.95
NMD2YHR077C YER034WP40022 185 aaKnown RBP2.88□□□□□ -1.95
NMD2YHR077C COG3P40094 801 aa2.88□□□□□ -1.95
NMD2YHR077C MSS2P40990 351 aa2.88□□□□□ -1.95
NMD2YHR077C ALR2P43553 858 aa2.88□□□□□ -1.95
NMD2YHR077C YJR149WP47177 404 aa2.88□□□□□ -1.95
Retrieved 100 of 5,963 RNA–protein pairs in 39.3 ms