RNA–Protein interactions for RNA: YGR261C

APL6, Transcript of Beta3-like subunit of the yeast AP-3 complex, yeast

Gene APL6, Length 2,430 nt, Biotype protein coding.

RNA		Protein				Prediction (catRAPID)		Interaction (RIP-Chip)
Gene	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	Detected Interaction
APL6	YGR261C	END3	P39013	349 aa		4.81	□□□□□ -1.64
APL6	YGR261C	FKH2	P41813	862 aa		4.81	□□□□□ -1.64
APL6	YGR261C	YJR111C	P47148	283 aa	Known RBP	4.81	□□□□□ -1.64
APL6	YGR261C	MTQ1	P53944	314 aa		4.81	□□□□□ -1.64
APL6	YGR261C	YAT1	P80235	687 aa		4.81	□□□□□ -1.64
APL6	YGR261C	TAF12	Q03761	539 aa		4.81	□□□□□ -1.64
APL6	YGR261C	BAG7	Q12128	409 aa		4.81	□□□□□ -1.64
APL6	YGR261C	YKL068W-A	Q3E826	78 aa		4.81	□□□□□ -1.64
APL6	YGR261C	YBR182C-A	Q8TGU6	64 aa		4.81	□□□□□ -1.64
APL6	YGR261C	VCX1	Q99385	411 aa		4.81	□□□□□ -1.64
APL6	YGR261C	PTP1	P25044	335 aa		4.81	□□□□□ -1.64
APL6	YGR261C	HXT3	P32466	567 aa	Known RBP	4.81	□□□□□ -1.64
APL6	YGR261C	SNU114	P36048	1008 aa	Known RBP	4.81	□□□□□ -1.64
APL6	YGR261C	AUR1	P36107	401 aa	Predicted RBP	4.81	□□□□□ -1.64
APL6	YGR261C	YBR287W	P38355	427 aa		4.81	□□□□□ -1.64
APL6	YGR261C	CCT2	P39076	527 aa	Known RBP	4.81	□□□□□ -1.64
APL6	YGR261C	SLM1	P40485	686 aa		4.81	□□□□□ -1.64
APL6	YGR261C	RTT101	P47050	842 aa		4.81	□□□□□ -1.64
APL6	YGR261C	NPA3	P47122	385 aa		4.81	□□□□□ -1.64
APL6	YGR261C	COS5	P47187	383 aa		4.81	□□□□□ -1.64
APL6	YGR261C	RPS7B	P48164	190 aa	Known RBP	4.81	□□□□□ -1.64
APL6	YGR261C	ACS1	Q01574	713 aa		4.81	□□□□□ -1.64
APL6	YGR261C	SKO1	Q02100	647 aa		4.81	□□□□□ -1.64
APL6	YGR261C	DML1	Q03652	475 aa		4.81	□□□□□ -1.64
APL6	YGR261C	ACL4	Q03771	387 aa		4.81	□□□□□ -1.64
APL6	YGR261C	GIS1	Q03833	894 aa		4.81	□□□□□ -1.64
APL6	YGR261C	PDS5	Q04264	1277 aa		4.81	□□□□□ -1.64
APL6	YGR261C	RPC11	Q04307	110 aa	Predicted RBP	4.81	□□□□□ -1.64
APL6	YGR261C	CRD1	Q07560	283 aa		4.81	□□□□□ -1.64
APL6	YGR261C	GEP3	Q08622	556 aa		4.81	□□□□□ -1.64
APL6	YGR261C	YPL225W	Q08971	146 aa	Known RBP	4.81	□□□□□ -1.64
APL6	YGR261C	ATG9	Q12142	997 aa		4.81	□□□□□ -1.64
APL6	YGR261C	YRA1	Q12159	226 aa	Known RBP	4.81	□□□□□ -1.64
APL6	YGR261C	YOR029W	Q12243	111 aa		4.81	□□□□□ -1.64
APL6	YGR261C	HMS1	Q12398	434 aa		4.81	□□□□□ -1.64
APL6	YGR261C	Q0182	Q9ZZW1	134 aa		4.81	□□□□□ -1.64
APL6	YGR261C	TOP2	P06786	1428 aa	Known RBP	4.8	□□□□□ -1.64
APL6	YGR261C	COX2	P00410	251 aa		4.8	□□□□□ -1.64
APL6	YGR261C	SOD2	P00447	233 aa		4.8	□□□□□ -1.64
APL6	YGR261C	CBF1	P17106	351 aa		4.8	□□□□□ -1.64
APL6	YGR261C	PRE4	P30657	266 aa		4.8	□□□□□ -1.64
APL6	YGR261C	TCA17	P32613	152 aa		4.8	□□□□□ -1.64
APL6	YGR261C	KES1	P35844	434 aa	Known RBP	4.8	□□□□□ -1.64
APL6	YGR261C	ERG7	P38604	731 aa		4.8	□□□□□ -1.64
APL6	YGR261C	SBE22	P38814	852 aa		4.8	□□□□□ -1.64
APL6	YGR261C	YJL206C	P39529	758 aa		4.8	□□□□□ -1.64
APL6	YGR261C	NPP2	P39997	493 aa		4.8	□□□□□ -1.64
APL6	YGR261C	YJL181W	P46987	611 aa		4.8	□□□□□ -1.64
APL6	YGR261C	YJL118W	P47022	219 aa		4.8	□□□□□ -1.64
APL6	YGR261C	AMA1	P50082	593 aa		4.8	□□□□□ -1.64
APL6	YGR261C	NOP19	P53317	196 aa	Predicted RBP	4.8	□□□□□ -1.64
APL6	YGR261C	FAR8	Q05040	523 aa		4.8	□□□□□ -1.64
APL6	YGR261C	VTA1	Q06263	330 aa		4.8	□□□□□ -1.64
APL6	YGR261C	DXO1	Q06349	442 aa		4.8	□□□□□ -1.64
APL6	YGR261C	CDA2	Q06703	312 aa		4.8	□□□□□ -1.64
APL6	YGR261C	DIA2	Q08496	732 aa	Predicted RBP	4.8	□□□□□ -1.64
APL6	YGR261C	SET6	Q12529	373 aa		4.8	□□□□□ -1.64
APL6	YGR261C	RAS1	P01119	309 aa		4.8	□□□□□ -1.64
APL6	YGR261C	SCEI	P03882	235 aa		4.8	□□□□□ -1.64
APL6	YGR261C	QCR2	P07257	368 aa		4.8	□□□□□ -1.64
APL6	YGR261C	RPC31	P17890	251 aa		4.8	□□□□□ -1.64
APL6	YGR261C	SPO7	P18410	259 aa		4.8	□□□□□ -1.64
APL6	YGR261C	YUR1	P26725	428 aa		4.8	□□□□□ -1.64
APL6	YGR261C	RAD24	P32641	659 aa		4.8	□□□□□ -1.64
APL6	YGR261C	RPC34	P32910	317 aa		4.8	□□□□□ -1.64
APL6	YGR261C	CCT4	P39078	528 aa	Known RBP	4.8	□□□□□ -1.64
APL6	YGR261C	HCR1	Q05775	265 aa	Known RBP	4.8	□□□□□ -1.64
APL6	YGR261C	PAM18	Q07914	168 aa		4.8	□□□□□ -1.64
APL6	YGR261C	HRK1	Q08732	759 aa	Known RBP	4.8	□□□□□ -1.64
APL6	YGR261C	GPR1	Q12361	961 aa		4.8	□□□□□ -1.64
APL6	YGR261C	RPN6	Q12377	434 aa		4.8	□□□□□ -1.64
APL6	YGR261C	Q0142	Q9ZZW4	58 aa		4.8	□□□□□ -1.64
APL6	YGR261C	SEC12	P11655	471 aa		4.79	□□□□□ -1.64
APL6	YGR261C	SSE2	P32590	693 aa	Known RBP	4.79	□□□□□ -1.64
APL6	YGR261C	PFS1	P38872	237 aa		4.79	□□□□□ -1.64
APL6	YGR261C	NUP60	P39705	539 aa		4.79	□□□□□ -1.64
APL6	YGR261C	SEN34	P39707	275 aa		4.79	□□□□□ -1.64
APL6	YGR261C	RRD1	P40454	393 aa	Known RBP	4.79	□□□□□ -1.64
APL6	YGR261C	BRE2	P43132	505 aa		4.79	□□□□□ -1.64
APL6	YGR261C	SPC98	P53540	846 aa		4.79	□□□□□ -1.64
APL6	YGR261C	TRM112	P53738	135 aa	Predicted RBP	4.79	□□□□□ -1.64
APL6	YGR261C	YLR407W	Q06070	228 aa		4.79	□□□□□ -1.64
APL6	YGR261C	CDA1	Q06702	301 aa		4.79	□□□□□ -1.64
APL6	YGR261C	YPR078C	Q06813	372 aa		4.79	□□□□□ -1.64
APL6	YGR261C	YDL144C	Q07589	356 aa		4.79	□□□□□ -1.64
APL6	YGR261C	ATP2	P00830	511 aa	Known RBP	4.78	□□□□□ -1.64
APL6	YGR261C	CKI1	P20485	582 aa		4.78	□□□□□ -1.64
APL6	YGR261C	CDC10	P25342	322 aa	Known RBP	4.78	□□□□□ -1.64
APL6	YGR261C	RAD23	P32628	398 aa	Known RBP	4.78	□□□□□ -1.64
APL6	YGR261C	TAF14	P35189	244 aa		4.78	□□□□□ -1.64
APL6	YGR261C	ADD66	P36040	267 aa		4.78	□□□□□ -1.64
APL6	YGR261C	GLY1	P37303	387 aa	Known RBP	4.78	□□□□□ -1.64
APL6	YGR261C	LDB7	P38210	180 aa		4.78	□□□□□ -1.64
APL6	YGR261C	TSL1	P38427	1098 aa	Known RBP	4.78	□□□□□ -1.64
APL6	YGR261C	PRP39	P39682	629 aa	Known RBP	4.78	□□□□□ -1.64
APL6	YGR261C	PZF1	P39933	429 aa		4.78	□□□□□ -1.64
APL6	YGR261C	RPH1	P39956	796 aa		4.78	□□□□□ -1.64
APL6	YGR261C	MMF1	P40185	145 aa	Known RBP	4.78	□□□□□ -1.64
APL6	YGR261C	POG1	P40473	351 aa		4.78	□□□□□ -1.64
APL6	YGR261C	HXT10	P43581	546 aa		4.78	□□□□□ -1.64

Retrieved 100 of 5,963 RNA–protein pairs in 13.8 ms