RNA–Protein interactions for RNA: YGR002C

SWC4, Transcript of Component of the Swr1p complex that incorporates Htz1p into chromatin, yeastyeast

Gene SWC4, Length 1,431 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
SWC4YGR002C SEC1P30619 724 aaKnown RBP2.92□□□□□ -1.94
SWC4YGR002C MRP4P32902 394 aa2.92□□□□□ -1.94
SWC4YGR002C RIB7P33312 244 aa2.92□□□□□ -1.94
SWC4YGR002C SWH1P35845 1188 aa2.92□□□□□ -1.94
SWC4YGR002C LRP1P38801 184 aaKnown RBP2.92□□□□□ -1.94
SWC4YGR002C YJL068CP40363 299 aa2.92□□□□□ -1.94
SWC4YGR002C MET18P40469 1032 aa2.92□□□□□ -1.94
SWC4YGR002C GPD2P41911 440 aaKnown RBP2.92□□□□□ -1.94
SWC4YGR002C AGX1P43567 385 aa2.92□□□□□ -1.94
SWC4YGR002C MNP1P53163 194 aaPredicted RBP2.92□□□□□ -1.94
SWC4YGR002C CUL3P53202 744 aa2.92□□□□□ -1.94
SWC4YGR002C REX2P54964 269 aaKnown RBP2.92□□□□□ -1.94
SWC4YGR002C RHO4Q00246 291 aa2.92□□□□□ -1.94
SWC4YGR002C YLR287CQ05881 355 aa2.92□□□□□ -1.94
SWC4YGR002C VPS38Q05919 439 aa2.92□□□□□ -1.94
SWC4YGR002C SMF3Q12078 473 aaPredicted RBP2.92□□□□□ -1.94
SWC4YGR002C RTC5Q12108 567 aaKnown RBP2.92□□□□□ -1.94
SWC4YGR002C TIP41Q12199 356 aa2.92□□□□□ -1.94
SWC4YGR002C NCE102Q12207 173 aaRIP-Chip data2.92□□□□□ -1.94not detected
SWC4YGR002C HSH49Q99181 213 aaPredicted RBP2.92□□□□□ -1.94
SWC4YGR002C PEP4P07267 405 aaKnown RBP2.91□□□□□ -1.94
SWC4YGR002C SEC62P21825 274 aa2.91□□□□□ -1.94
SWC4YGR002C OCA4P25366 362 aa2.91□□□□□ -1.94
SWC4YGR002C SPB1P25582 841 aaPredicted RBP2.91□□□□□ -1.94
SWC4YGR002C ACP1P32463 125 aa2.91□□□□□ -1.94
SWC4YGR002C YME1P32795 747 aa2.91□□□□□ -1.94
SWC4YGR002C ECM15P35195 104 aa2.91□□□□□ -1.94
SWC4YGR002C CTM1P38818 585 aa2.91□□□□□ -1.94
SWC4YGR002C NPR2P39923 615 aa2.91□□□□□ -1.94
SWC4YGR002C ALD5P40047 520 aaKnown RBP2.91□□□□□ -1.94
SWC4YGR002C ZIM17P42844 174 aa2.91□□□□□ -1.94
SWC4YGR002C YGL082WP53155 381 aa2.91□□□□□ -1.94
SWC4YGR002C RBG2P53295 368 aaKnown RBP2.91□□□□□ -1.94
SWC4YGR002C PXR1P53335 271 aaPredicted RBP2.91□□□□□ -1.94
SWC4YGR002C SAM50P53969 484 aa2.91□□□□□ -1.94
SWC4YGR002C SPO19Q03029 223 aa2.91□□□□□ -1.94
SWC4YGR002C YMR087WQ04299 284 aa2.91□□□□□ -1.94
SWC4YGR002C GLO2Q05584 274 aa2.91□□□□□ -1.94
SWC4YGR002C FUS2Q05670 677 aa2.91□□□□□ -1.94
SWC4YGR002C NNT1Q05874 261 aa2.91□□□□□ -1.94
SWC4YGR002C SMD2Q06217 110 aaKnown RBP2.91□□□□□ -1.94
SWC4YGR002C SDH5Q08230 162 aa2.91□□□□□ -1.94
SWC4YGR002C SEC39Q12745 709 aa2.91□□□□□ -1.94
SWC4YGR002C RAD52P06778 471 aaKnown RBP2.9□□□□□ -1.95
SWC4YGR002C DFR1P07807 211 aaKnown RBP RIP-Chip data2.9□□□□□ -1.95not detected
SWC4YGR002C ELO2P25358 347 aa2.9□□□□□ -1.95
SWC4YGR002C PUP2P32379 260 aa2.9□□□□□ -1.95
SWC4YGR002C VPS17P32913 551 aa2.9□□□□□ -1.95
SWC4YGR002C WBP1P33767 430 aaKnown RBP2.9□□□□□ -1.95
SWC4YGR002C BMH2P34730 273 aaKnown RBP2.9□□□□□ -1.95
SWC4YGR002C ECM4P36156 370 aa2.9□□□□□ -1.95
SWC4YGR002C POP7P38291 140 aa2.9□□□□□ -1.95
SWC4YGR002C DED81P38707 554 aaKnown RBP2.9□□□□□ -1.95
SWC4YGR002C MSR1P38714 643 aa2.9□□□□□ -1.95
SWC4YGR002C UTP9P38882 575 aaKnown RBP2.9□□□□□ -1.95
SWC4YGR002C SHC1P39000 512 aa2.9□□□□□ -1.95
SWC4YGR002C SPO22P40511 975 aa2.9□□□□□ -1.95
SWC4YGR002C DSN1P40568 576 aa2.9□□□□□ -1.95
SWC4YGR002C INA22P40576 216 aa2.9□□□□□ -1.95
SWC4YGR002C MKT1P40850 830 aaKnown RBP2.9□□□□□ -1.95
SWC4YGR002C EPL1P43572 832 aa2.9□□□□□ -1.95
SWC4YGR002C AIM22P47051 409 aa2.9□□□□□ -1.95
SWC4YGR002C PET130P47065 347 aa2.9□□□□□ -1.95
SWC4YGR002C RAD17P48581 401 aa2.9□□□□□ -1.95
SWC4YGR002C LSG1P53145 640 aaKnown RBP2.9□□□□□ -1.95
SWC4YGR002C DRN1P53255 507 aaKnown RBP2.9□□□□□ -1.95
SWC4YGR002C RET3P53600 189 aa2.9□□□□□ -1.95
SWC4YGR002C ALF1P53904 254 aa2.9□□□□□ -1.95
SWC4YGR002C MGR3Q04472 501 aa2.9□□□□□ -1.95
SWC4YGR002C YMR317WQ04893 1140 aa2.9□□□□□ -1.95
SWC4YGR002C SSQ1Q05931 657 aaPredicted RBP2.9□□□□□ -1.95
SWC4YGR002C LOT6Q07923 191 aa2.9□□□□□ -1.95
SWC4YGR002C YEH2Q07950 538 aa2.9□□□□□ -1.95
SWC4YGR002C THI20Q08224 551 aa2.9□□□□□ -1.95
SWC4YGR002C THP1Q08231 455 aa2.9□□□□□ -1.95
SWC4YGR002C RKM1Q08961 583 aaPredicted RBP2.9□□□□□ -1.95
SWC4YGR002C DAP1Q12091 152 aa2.9□□□□□ -1.95
SWC4YGR002C AVL9Q12500 764 aa2.9□□□□□ -1.95
SWC4YGR002C ARG3P05150 338 aa2.89□□□□□ -1.95
SWC4YGR002C RPS3P05750 240 aaKnown RBP2.89□□□□□ -1.95
SWC4YGR002C APE1P14904 514 aa2.89□□□□□ -1.95
SWC4YGR002C GRR1P24814 1151 aa2.89□□□□□ -1.95
SWC4YGR002C TFB1P32776 642 aa2.89□□□□□ -1.95
SWC4YGR002C CPR5P35176 225 aa2.89□□□□□ -1.95
SWC4YGR002C YNK1P36010 153 aaKnown RBP2.89□□□□□ -1.95
SWC4YGR002C YKT6P36015 200 aaKnown RBP2.89□□□□□ -1.95
SWC4YGR002C RSM22P36056 628 aa2.89□□□□□ -1.95
SWC4YGR002C CST26P38226 397 aa2.89□□□□□ -1.95
SWC4YGR002C RTT107P38850 1070 aa2.89□□□□□ -1.95
SWC4YGR002C YHR210CP38893 341 aa2.89□□□□□ -1.95
SWC4YGR002C SUR2P38992 349 aa2.89□□□□□ -1.95
SWC4YGR002C YHB1P39676 399 aaKnown RBP2.89□□□□□ -1.95
SWC4YGR002C VPS52P39904 641 aa2.89□□□□□ -1.95
SWC4YGR002C AIM10P39965 576 aaKnown RBP2.89□□□□□ -1.95
SWC4YGR002C YEL057CP39983 233 aa2.89□□□□□ -1.95
SWC4YGR002C ARF3P40994 183 aaRIP-Chip data2.89□□□□□ -1.95not detected
SWC4YGR002C DIM1P41819 318 aaKnown RBP2.89□□□□□ -1.95
SWC4YGR002C IKS1P47042 667 aa2.89□□□□□ -1.95
SWC4YGR002C YJL055WP47044 245 aa2.89□□□□□ -1.95
SWC4YGR002C YGL260WP53056 76 aa2.89□□□□□ -1.95
Retrieved 100 of 5,963 RNA–protein pairs in 51.3 ms