RNA–Protein interactions for RNA: YDL212W

SHR3, Transcript of Endoplasmic reticulum packaging chaperone, yeastyeast

Gene SHR3, Length 633 nt, Biotype protein coding, Subcellular localisation Mitochondria .

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
SHR3YDL212W URB2P47108 1174 aa3.83□□□□□ -1.8
SHR3YDL212W YGL242CP53066 181 aa3.83□□□□□ -1.8
SHR3YDL212W POP6P53218 158 aa3.83□□□□□ -1.8
SHR3YDL212W RRP12Q12754 1228 aaKnown RBP3.83□□□□□ -1.8
SHR3YDL212W YML133CQ03099 1374 aa3.83□□□□□ -1.8
SHR3YDL212W YLL067CQ07888 1374 aa3.83□□□□□ -1.8
SHR3YDL212W YLL066CQ99208 1374 aa3.83□□□□□ -1.8
SHR3YDL212W TOP1P04786 769 aa3.82□□□□□ -1.8
SHR3YDL212W LEU4P06208 619 aaKnown RBP3.82□□□□□ -1.8
SHR3YDL212W SPT15P13393 240 aaKnown RBP3.82□□□□□ -1.8
SHR3YDL212W LDB16P25587 256 aa3.82□□□□□ -1.8
SHR3YDL212W YCR100CP25606 316 aa3.82□□□□□ -1.8
SHR3YDL212W CMC1P36064 111 aa3.82□□□□□ -1.8
SHR3YDL212W VID24P38263 362 aa3.82□□□□□ -1.8
SHR3YDL212W OGG1P53397 376 aaPredicted RBP3.82□□□□□ -1.8
SHR3YDL212W ELP3Q02908 557 aaKnown RBP3.82□□□□□ -1.8
SHR3YDL212W PBA1Q05778 276 aa3.82□□□□□ -1.8
SHR3YDL212W MRPL35Q06678 367 aa3.82□□□□□ -1.8
SHR3YDL212W SPB1P25582 841 aaPredicted RBP3.81□□□□□ -1.8
SHR3YDL212W MRPL4P36517 319 aa3.81□□□□□ -1.8
SHR3YDL212W NAT2P37293 288 aa3.81□□□□□ -1.8
SHR3YDL212W HXT14P42833 540 aa3.81□□□□□ -1.8
SHR3YDL212W SHE10P53075 577 aa3.81□□□□□ -1.8
SHR3YDL212W ODC1Q03028 310 aa3.81□□□□□ -1.8
SHR3YDL212W SOV1Q04748 898 aa3.81□□□□□ -1.8
SHR3YDL212W CPR4P25334 318 aa3.8□□□□□ -1.8
SHR3YDL212W YBL059WP34224 193 aa3.8□□□□□ -1.8
SHR3YDL212W YCR041WP37265 110 aa3.8□□□□□ -1.8
SHR3YDL212W NDT80P38830 627 aa3.8□□□□□ -1.8
SHR3YDL212W YGR149WP48236 432 aa3.8□□□□□ -1.8
SHR3YDL212W ESA1Q08649 445 aa3.8□□□□□ -1.8
SHR3YDL212W GRX6Q12438 231 aa3.8□□□□□ -1.8
SHR3YDL212W MET17P06106 444 aa3.79□□□□□ -1.8
SHR3YDL212W SAM1P10659 382 aaKnown RBP3.79□□□□□ -1.8
SHR3YDL212W SAM2P19358 384 aaKnown RBP3.79□□□□□ -1.8
SHR3YDL212W DEG1P31115 442 aaKnown RBP3.79□□□□□ -1.8
SHR3YDL212W AFG1P32317 509 aa3.79□□□□□ -1.8
SHR3YDL212W SWD3P38123 315 aa3.79□□□□□ -1.8
SHR3YDL212W CCT2P39076 527 aaKnown RBP3.79□□□□□ -1.8
SHR3YDL212W PRE5P40302 234 aaKnown RBP3.79□□□□□ -1.8
SHR3YDL212W OST1P41543 476 aaKnown RBP3.79□□□□□ -1.8
SHR3YDL212W YFL067WP43537 175 aa3.79□□□□□ -1.8
SHR3YDL212W GOR1P53839 350 aa3.79□□□□□ -1.8
SHR3YDL212W YAR066WP0CX18 203 aa3.78□□□□□ -1.8
SHR3YDL212W YHR214WP0CX19 203 aa3.78□□□□□ -1.8
SHR3YDL212W RAD14P28519 371 aa3.78□□□□□ -1.8
SHR3YDL212W CRM1P30822 1084 aaKnown RBP3.78□□□□□ -1.8
SHR3YDL212W CBP4P37267 147 aa3.78□□□□□ -1.8
SHR3YDL212W MIX23P38162 196 aa3.78□□□□□ -1.8
SHR3YDL212W TFG2P41896 400 aaPredicted RBP3.78□□□□□ -1.8
SHR3YDL212W IRC6P43615 237 aa3.78□□□□□ -1.8
SHR3YDL212W PNG1Q02890 363 aa3.78□□□□□ -1.8
SHR3YDL212W ADD37Q03233 198 aa3.78□□□□□ -1.8
SHR3YDL212W RQC1Q05468 723 aaKnown RBP3.78□□□□□ -1.8
SHR3YDL212W RIM20Q12033 661 aa3.78□□□□□ -1.8
SHR3YDL212W RHO2P06781 192 aa3.77□□□□□ -1.81
SHR3YDL212W CLN3P13365 580 aa3.77□□□□□ -1.81
SHR3YDL212W IDH2P28241 369 aaKnown RBP3.77□□□□□ -1.81
SHR3YDL212W HXT3P32466 567 aaKnown RBP3.77□□□□□ -1.81
SHR3YDL212W YEL045CP32616 141 aa3.77□□□□□ -1.81
SHR3YDL212W NIP100P33420 868 aa3.77□□□□□ -1.81
SHR3YDL212W SMF1P38925 575 aa3.77□□□□□ -1.81
SHR3YDL212W ESL1P40456 1118 aa3.77□□□□□ -1.81
SHR3YDL212W YGR210CP42942 411 aa3.77□□□□□ -1.81
SHR3YDL212W PCP1P53259 346 aa3.77□□□□□ -1.81
SHR3YDL212W RRN11Q04712 507 aa3.77□□□□□ -1.81
SHR3YDL212W TSR1Q07381 788 aaKnown RBP3.77□□□□□ -1.81
SHR3YDL212W YPL199CQ08954 240 aa3.77□□□□□ -1.81
SHR3YDL212W YLR278CQ05854 1341 aa3.76□□□□□ -1.81
SHR3YDL212W HHF1P02309 103 aaKnown RBP3.76□□□□□ -1.81
SHR3YDL212W ISY1P21374 235 aaPredicted RBP3.76□□□□□ -1.81
SHR3YDL212W ROX1P25042 368 aa3.76□□□□□ -1.81
SHR3YDL212W ITR1P30605 584 aa3.76□□□□□ -1.81
SHR3YDL212W REE1P40893 198 aa3.76□□□□□ -1.81
SHR3YDL212W ARF3P40994 183 aaRIP-Chip data3.76□□□□□ -1.81not detected
SHR3YDL212W YIP1P53039 248 aa3.76□□□□□ -1.81
SHR3YDL212W TOF1P53840 1238 aa3.76□□□□□ -1.81
SHR3YDL212W IBD2P53892 351 aa3.76□□□□□ -1.81
SHR3YDL212W NCS2P53923 493 aaPredicted RBP3.76□□□□□ -1.81
SHR3YDL212W MRP51Q02950 344 aa3.76□□□□□ -1.81
SHR3YDL212W MRP7P12687 371 aa3.75□□□□□ -1.81
SHR3YDL212W PPH22P23595 377 aa3.75□□□□□ -1.81
SHR3YDL212W PAD1P33751 242 aaKnown RBP RIP-Chip data3.75□□□□□ -1.81not detected
SHR3YDL212W YBR137WP38276 179 aa3.75□□□□□ -1.81
SHR3YDL212W BTN2P53286 410 aa3.75□□□□□ -1.81
SHR3YDL212W HEL2Q05580 639 aaKnown RBP3.75□□□□□ -1.81
SHR3YDL212W HRT3Q12347 344 aa3.75□□□□□ -1.81
SHR3YDL212W YOL159C-AQ3E769 90 aa3.75□□□□□ -1.81
SHR3YDL212W ADH2P00331 348 aaKnown RBP3.74□□□□□ -1.81
SHR3YDL212W CKA1P15790 372 aa3.74□□□□□ -1.81
SHR3YDL212W PRP21P32524 280 aaPredicted RBP3.74□□□□□ -1.81
SHR3YDL212W ECM25P32525 599 aa3.74□□□□□ -1.81
SHR3YDL212W SWE1P32944 819 aa3.74□□□□□ -1.81
SHR3YDL212W MST28P39552 234 aa3.74□□□□□ -1.81
SHR3YDL212W NDE1P40215 560 aa3.74□□□□□ -1.81
SHR3YDL212W RMD9P53140 646 aaKnown RBP3.74□□□□□ -1.81
SHR3YDL212W HXT11P54862 567 aa3.74□□□□□ -1.81
SHR3YDL212W TMC1Q08422 150 aaPredicted RBP3.74□□□□□ -1.81
SHR3YDL212W YPR022CQ12139 1133 aa3.74□□□□□ -1.81
SHR3YDL212W RAD61Q99359 647 aa3.74□□□□□ -1.81
Retrieved 100 of 5,963 RNA–protein pairs in 31.5 ms