RNA–Protein interactions for RNA: ENST00000588762.5

GHDC-209, Transcript of GH3 domain containing, humanhuman

TSL 1 (best)

Gene GHDC, Length 842 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GHDC-209ENST00000588762 IQSEC1Q6DN90 963 aa17.74■□□□□ 0.43
GHDC-209ENST00000588762 SCFD2Q8WU76 684 aa17.74■□□□□ 0.43
GHDC-209ENST00000588762 PGBD1Q96JS3 809 aa17.74■□□□□ 0.43
GHDC-209ENST00000588762 RARBP10826 455 aa17.73■□□□□ 0.43
GHDC-209ENST00000588762 GJB2P29033 226 aa17.73■□□□□ 0.43
GHDC-209ENST00000588762 TNFAIP2Q03169 654 aa17.73■□□□□ 0.43
GHDC-209ENST00000588762 SAFBQ15424 915 aaKnown RBP eCLIP17.73■□□□□ 0.43
GHDC-209ENST00000588762 GNPTABQ3T906 1256 aa17.73■□□□□ 0.43
GHDC-209ENST00000588762 KRT40Q6A162 431 aa17.73■□□□□ 0.43
GHDC-209ENST00000588762 TAPT1Q6NXT6 567 aa17.73■□□□□ 0.43
GHDC-209ENST00000588762 SEPT14Q6ZU15 432 aa17.73■□□□□ 0.43
GHDC-209ENST00000588762 RASGRP4Q8TDF6 673 aa17.73■□□□□ 0.43
GHDC-209ENST00000588762 PDGFCQ9NRA1 345 aa17.73■□□□□ 0.43
GHDC-209ENST00000588762 RBM47A0AV96 593 aaKnown RBP17.72■□□□□ 0.43
GHDC-209ENST00000588762 ADAMTS3O15072 1205 aa17.72■□□□□ 0.43
GHDC-209ENST00000588762 SGPL1O95470 568 aa17.72■□□□□ 0.43
GHDC-209ENST00000588762 TFRCP02786 760 aaKnown RBP17.72■□□□□ 0.43
GHDC-209ENST00000588762 MMP1P03956 469 aa17.72■□□□□ 0.43
GHDC-209ENST00000588762 CAPN2P17655 700 aa17.72■□□□□ 0.43
GHDC-209ENST00000588762 KRT2P35908 639 aa17.72■□□□□ 0.43
GHDC-209ENST00000588762 SREBF1P36956 1147 aa17.72■□□□□ 0.43
GHDC-209ENST00000588762 ADCYAP1R1P41586 468 aa17.72■□□□□ 0.43
GHDC-209ENST00000588762 GJA8P48165 433 aa17.72■□□□□ 0.43
GHDC-209ENST00000588762 NPY5RQ15761 445 aa17.72■□□□□ 0.43
GHDC-209ENST00000588762 ANO1Q5XXA6 986 aa17.72■□□□□ 0.43
GHDC-209ENST00000588762 KRT25Q7Z3Z0 450 aa17.72■□□□□ 0.43
GHDC-209ENST00000588762 U2AF1L4Q8WU68 220 aaKnown RBP17.72■□□□□ 0.43
GHDC-209ENST00000588762 INTS4Q96HW7 963 aaKnown RBP17.72■□□□□ 0.43
GHDC-209ENST00000588762 WDR11Q9BZH6 1224 aa17.72■□□□□ 0.43
GHDC-209ENST00000588762 CCDC194A0A1B0GVG4 234 aa17.71■□□□□ 0.43
GHDC-209ENST00000588762 DUSP11O75319 330 aaKnown RBP17.71■□□□□ 0.43
GHDC-209ENST00000588762 HSP90AA1P07900 732 aaKnown RBP17.71■□□□□ 0.43
GHDC-209ENST00000588762 ZNF76P36508 570 aa17.71■□□□□ 0.43
GHDC-209ENST00000588762 MRPS9P82933 396 aaKnown RBP17.71■□□□□ 0.43
GHDC-209ENST00000588762 ARHGAP4P98171 946 aa17.71■□□□□ 0.43
GHDC-209ENST00000588762 GUCY1B3Q02153 619 aa17.71■□□□□ 0.43
GHDC-209ENST00000588762 TTLL4Q14679 1199 aa17.71■□□□□ 0.43
GHDC-209ENST00000588762 LHX8Q68G74 356 aa17.71■□□□□ 0.43
GHDC-209ENST00000588762 KCNV1Q6PIU1 500 aa17.71■□□□□ 0.43
GHDC-209ENST00000588762 NLRX1Q86UT6 975 aa17.71■□□□□ 0.43
GHDC-209ENST00000588762 ZFP91Q96JP5 570 aaPredicted RBP17.71■□□□□ 0.43
GHDC-209ENST00000588762 XPNPEP3Q9NQH7 507 aa17.71■□□□□ 0.43
GHDC-209ENST00000588762 RTEL1Q9NZ71 1219 aa17.71■□□□□ 0.43
GHDC-209ENST00000588762 M0R2N6 131 aa17.7■□□□□ 0.42
GHDC-209ENST00000588762 TXNP10599 105 aaKnown RBP17.7■□□□□ 0.42
GHDC-209ENST00000588762 NONOQ15233 471 aaKnown RBP eCLIP17.7■□□□□ 0.42
GHDC-209ENST00000588762 DUSP28Q4G0W2 176 aa17.7■□□□□ 0.42
GHDC-209ENST00000588762 DIS3L2Q8IYB7 885 aaKnown RBP17.7■□□□□ 0.42
GHDC-209ENST00000588762 FBXO18Q8NFZ0 1043 aa17.7■□□□□ 0.42
GHDC-209ENST00000588762 INPP4AQ96PE3 977 aaPredicted RBP17.7■□□□□ 0.42
GHDC-209ENST00000588762 AP5M1Q9H0R1 490 aa17.7■□□□□ 0.42
GHDC-209ENST00000588762 SPC25Q9HBM1 224 aa17.7■□□□□ 0.42
GHDC-209ENST00000588762 MRVI1Q9Y6F6 885 aa17.7■□□□□ 0.42
GHDC-209ENST00000588762 C11orf97A0A1B0GVM6 126 aaPredicted RBP17.69■□□□□ 0.42
GHDC-209ENST00000588762 POTEFA5A3E0 1075 aa17.69■□□□□ 0.42
GHDC-209ENST00000588762 NKRFO15226 690 aaKnown RBP eCLIP17.69■□□□□ 0.42
GHDC-209ENST00000588762 FIBPO43427 364 aa17.69■□□□□ 0.42
GHDC-209ENST00000588762 TGFB3P10600 412 aa17.69■□□□□ 0.42
GHDC-209ENST00000588762 SMPD1P17405 629 aa17.69■□□□□ 0.42
GHDC-209ENST00000588762 GNL2Q13823 731 aaKnown RBP17.69■□□□□ 0.42
GHDC-209ENST00000588762 ARRDC4Q8NCT1 418 aa17.69■□□□□ 0.42
GHDC-209ENST00000588762 OXER1Q8TDS5 423 aa17.69■□□□□ 0.42
GHDC-209ENST00000588762 LENG1Q96BZ8 264 aaPredicted RBP17.69■□□□□ 0.42
GHDC-209ENST00000588762 CDHR1Q96JP9 859 aa17.69■□□□□ 0.42
GHDC-209ENST00000588762 CRISPLD2Q9H0B8 497 aa17.69■□□□□ 0.42
GHDC-209ENST00000588762 OGDHLQ9ULD0 1010 aa17.69■□□□□ 0.42
GHDC-209ENST00000588762 DOCK5Q9H7D0 1870 aa17.69■□□□□ 0.42
GHDC-209ENST00000588762 H3BQV1 296 aa17.68■□□□□ 0.42
GHDC-209ENST00000588762 RGS20O76081 388 aa17.68■□□□□ 0.42
GHDC-209ENST00000588762 MYCNP04198 464 aaPredicted RBP17.68■□□□□ 0.42
GHDC-209ENST00000588762 CYP3A4P08684 503 aa17.68■□□□□ 0.42
GHDC-209ENST00000588762 PDCP20941 246 aa17.68■□□□□ 0.42
GHDC-209ENST00000588762 USP11P51784 963 aa17.68■□□□□ 0.42
GHDC-209ENST00000588762 SOX10P56693 466 aa17.68■□□□□ 0.42
GHDC-209ENST00000588762 NR5A1Q13285 461 aa17.68■□□□□ 0.42
GHDC-209ENST00000588762 IFFO2Q5TF58 517 aa17.68■□□□□ 0.42
GHDC-209ENST00000588762 LARP1BQ659C4 914 aaKnown RBP17.68■□□□□ 0.42
GHDC-209ENST00000588762 CCDC62Q6P9F0 684 aa17.68■□□□□ 0.42
GHDC-209ENST00000588762 TLK2Q86UE8 772 aa17.68■□□□□ 0.42
GHDC-209ENST00000588762 TBCKQ8TEA7 893 aa17.68■□□□□ 0.42
GHDC-209ENST00000588762 GPRASP2Q96D09 838 aa17.68■□□□□ 0.42
GHDC-209ENST00000588762 MXRA8Q9BRK3 442 aa17.68■□□□□ 0.42
GHDC-209ENST00000588762 FOXD4L1Q9NU39 408 aa17.68■□□□□ 0.42
GHDC-209ENST00000588762 Q9Y3F1 56 aa17.68■□□□□ 0.42
GHDC-209ENST00000588762 UBIAD1Q9Y5Z9 338 aa17.68■□□□□ 0.42
GHDC-209ENST00000588762 BTBD18B2RXH4 712 aa17.67■□□□□ 0.42
GHDC-209ENST00000588762 SPATA31C2B4DYI2 1134 aa17.67■□□□□ 0.42
GHDC-209ENST00000588762 ADCY6O43306 1168 aa17.67■□□□□ 0.42
GHDC-209ENST00000588762 PGK1P00558 417 aa17.67■□□□□ 0.42
GHDC-209ENST00000588762 ITGB5P18084 799 aa17.67■□□□□ 0.42
GHDC-209ENST00000588762 EN2P19622 333 aaPredicted RBP17.67■□□□□ 0.42
GHDC-209ENST00000588762 ICAM3P32942 547 aa17.67■□□□□ 0.42
GHDC-209ENST00000588762 MTMR1Q13613 665 aa17.67■□□□□ 0.42
GHDC-209ENST00000588762 BECN1Q14457 450 aa17.67■□□□□ 0.42
GHDC-209ENST00000588762 LY6KQ17RY6 165 aa17.67■□□□□ 0.42
GHDC-209ENST00000588762 CEP55Q53EZ4 464 aa17.67■□□□□ 0.42
GHDC-209ENST00000588762 PIK3AP1Q6ZUJ8 805 aa17.67■□□□□ 0.42
GHDC-209ENST00000588762 RNF180Q86T96 592 aa17.67■□□□□ 0.42
GHDC-209ENST00000588762 ANKLE1Q8NAG6 615 aa17.67■□□□□ 0.42
GHDC-209ENST00000588762 CRYGNQ8WXF5 182 aa17.67■□□□□ 0.42
Retrieved 100 of 20,778 RNA–protein pairs in 57.7 ms