RNA–Protein interactions for RNA: ENST00000559389.1

SNX1-206, Transcript of sorting nexin 1, humanhuman

TSL 5

Gene SNX1, Length 753 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNX1-206ENST00000559389 MRPS9P82933 396 aaKnown RBP24.77■■□□□ 1.56
SNX1-206ENST00000559389 TAPT1Q6NXT6 567 aa24.77■■□□□ 1.56
SNX1-206ENST00000559389 DIS3L2Q8IYB7 885 aaKnown RBP24.77■■□□□ 1.56
SNX1-206ENST00000559389 TNFRSF25Q93038 417 aa24.77■■□□□ 1.56
SNX1-206ENST00000559389 MYH7BA7E2Y1 1941 aa24.76■■□□□ 1.55
SNX1-206ENST00000559389 STAM2O75886 525 aa24.76■■□□□ 1.55
SNX1-206ENST00000559389 AKR1A1P14550 325 aa24.76■■□□□ 1.55
SNX1-206ENST00000559389 ARHGAP4P98171 946 aa24.76■■□□□ 1.55
SNX1-206ENST00000559389 KRT25Q7Z3Z0 450 aa24.76■■□□□ 1.55
SNX1-206ENST00000559389 INPP4AQ96PE3 977 aaPredicted RBP24.76■■□□□ 1.55
SNX1-206ENST00000559389 RBM47A0AV96 593 aaKnown RBP24.75■■□□□ 1.55
SNX1-206ENST00000559389 RGS20O76081 388 aa24.75■■□□□ 1.55
SNX1-206ENST00000559389 CNGA1P29973 690 aa24.75■■□□□ 1.55
SNX1-206ENST00000559389 NR5A1Q13285 461 aa24.75■■□□□ 1.55
SNX1-206ENST00000559389 CCDC144BQ3MJ40 725 aa24.75■■□□□ 1.55
SNX1-206ENST00000559389 RNF208Q9H0X6 261 aa24.75■■□□□ 1.55
SNX1-206ENST00000559389 PDGFCQ9NRA1 345 aa24.75■■□□□ 1.55
SNX1-206ENST00000559389 FOXD4L1Q9NU39 408 aa24.75■■□□□ 1.55
SNX1-206ENST00000559389 DDX20Q9UHI6 824 aaKnown RBP24.75■■□□□ 1.55
SNX1-206ENST00000559389 MSCO60682 206 aa24.74■■□□□ 1.55
SNX1-206ENST00000559389 ADCYAP1R1P41586 468 aa24.74■■□□□ 1.55
SNX1-206ENST00000559389 NONOQ15233 471 aaKnown RBP eCLIP24.74■■□□□ 1.55
SNX1-206ENST00000559389 SAFBQ15424 915 aaKnown RBP eCLIP24.74■■□□□ 1.55
SNX1-206ENST00000559389 SCFD2Q8WU76 684 aa24.74■■□□□ 1.55
SNX1-206ENST00000559389 ZFP91Q96JP5 570 aaPredicted RBP24.74■■□□□ 1.55
SNX1-206ENST00000559389 FAM184BQ9ULE4 1060 aa24.74■■□□□ 1.55
SNX1-206ENST00000559389 CCDC194A0A1B0GVG4 234 aa24.73■■□□□ 1.55
SNX1-206ENST00000559389 BTBD18B2RXH4 712 aa24.73■■□□□ 1.55
SNX1-206ENST00000559389 ADCY6O43306 1168 aa24.73■■□□□ 1.55
SNX1-206ENST00000559389 CYP3A4P08684 503 aa24.73■■□□□ 1.55
SNX1-206ENST00000559389 UBIAD1Q9Y5Z9 338 aa24.73■■□□□ 1.55
SNX1-206ENST00000559389 C11orf97A0A1B0GVM6 126 aaPredicted RBP24.72■■□□□ 1.55
SNX1-206ENST00000559389 HSP90AA1P07900 732 aaKnown RBP24.72■■□□□ 1.55
SNX1-206ENST00000559389 GJB1P08034 283 aa24.72■■□□□ 1.55
SNX1-206ENST00000559389 ITGB5P18084 799 aa24.72■■□□□ 1.55
SNX1-206ENST00000559389 BECN1Q14457 450 aa24.72■■□□□ 1.55
SNX1-206ENST00000559389 IQSEC1Q6DN90 963 aa24.72■■□□□ 1.55
SNX1-206ENST00000559389 SEPT14Q6ZU15 432 aa24.72■■□□□ 1.55
SNX1-206ENST00000559389 TBCKQ8TEA7 893 aa24.72■■□□□ 1.55
SNX1-206ENST00000559389 LENG1Q96BZ8 264 aaPredicted RBP24.72■■□□□ 1.55
SNX1-206ENST00000559389 ARIH2O95376 493 aa24.71■■□□□ 1.55
SNX1-206ENST00000559389 PDCP20941 246 aa24.71■■□□□ 1.55
SNX1-206ENST00000559389 GNPTABQ3T906 1256 aa24.71■■□□□ 1.55
SNX1-206ENST00000559389 EARS2Q5JPH6 523 aaKnown RBP24.71■■□□□ 1.55
SNX1-206ENST00000559389 LARP1BQ659C4 914 aaKnown RBP24.71■■□□□ 1.55
SNX1-206ENST00000559389 CCDC62Q6P9F0 684 aa24.71■■□□□ 1.55
SNX1-206ENST00000559389 PIK3AP1Q6ZUJ8 805 aa24.71■■□□□ 1.55
SNX1-206ENST00000559389 DEFB118Q96PH6 123 aa24.71■■□□□ 1.55
SNX1-206ENST00000559389 WDR11Q9BZH6 1224 aa24.71■■□□□ 1.55
SNX1-206ENST00000559389 FOXP1Q9H334 677 aaPredicted RBP24.71■■□□□ 1.55
SNX1-206ENST00000559389 RTEL1Q9NZ71 1219 aa24.71■■□□□ 1.55
SNX1-206ENST00000559389 FAM205CA6NFA0 338 aa24.7■■□□□ 1.54
SNX1-206ENST00000559389 FIBPO43427 364 aa24.7■■□□□ 1.54
SNX1-206ENST00000559389 EDIL3O43854 480 aa24.7■■□□□ 1.54
SNX1-206ENST00000559389 SMPD1P17405 629 aa24.7■■□□□ 1.54
SNX1-206ENST00000559389 ICAM3P32942 547 aa24.7■■□□□ 1.54
SNX1-206ENST00000559389 TNFAIP2Q03169 654 aa24.7■■□□□ 1.54
SNX1-206ENST00000559389 SEMA3FQ13275 785 aa24.7■■□□□ 1.54
SNX1-206ENST00000559389 TTLL4Q14679 1199 aa24.7■■□□□ 1.54
SNX1-206ENST00000559389 INF2Q27J81 1249 aa24.7■■□□□ 1.54
SNX1-206ENST00000559389 DUSP28Q4G0W2 176 aa24.7■■□□□ 1.54
SNX1-206ENST00000559389 ANO1Q5XXA6 986 aa24.7■■□□□ 1.54
SNX1-206ENST00000559389 LHX8Q68G74 356 aa24.7■■□□□ 1.54
SNX1-206ENST00000559389 NLRX1Q86UT6 975 aa24.7■■□□□ 1.54
SNX1-206ENST00000559389 GPRASP2Q96D09 838 aa24.7■■□□□ 1.54
SNX1-206ENST00000559389 MXRA8Q9BRK3 442 aa24.7■■□□□ 1.54
SNX1-206ENST00000559389 GNEQ9Y223 722 aaKnown RBP24.7■■□□□ 1.54
SNX1-206ENST00000559389 MRVI1Q9Y6F6 885 aa24.7■■□□□ 1.54
SNX1-206ENST00000559389 KIF28PB7ZC32 967 aa24.69■■□□□ 1.54
SNX1-206ENST00000559389 H3BQV1 296 aa24.69■■□□□ 1.54
SNX1-206ENST00000559389 RARBP10826 455 aa24.69■■□□□ 1.54
SNX1-206ENST00000559389 CIITAP33076 1130 aa24.69■■□□□ 1.54
SNX1-206ENST00000559389 CEP55Q53EZ4 464 aa24.69■■□□□ 1.54
SNX1-206ENST00000559389 TMEM63BQ5T3F8 832 aa24.69■■□□□ 1.54
SNX1-206ENST00000559389 IFFO2Q5TF58 517 aa24.69■■□□□ 1.54
SNX1-206ENST00000559389 U2AF1L4Q8WU68 220 aaKnown RBP24.69■■□□□ 1.54
SNX1-206ENST00000559389 CRISPLD2Q9H0B8 497 aa24.69■■□□□ 1.54
SNX1-206ENST00000559389 JADE2Q9NQC1 790 aa24.69■■□□□ 1.54
SNX1-206ENST00000559389 IGLV3-22A0A075B6J6 115 aa24.68■■□□□ 1.54
SNX1-206ENST00000559389 SPATA31C2B4DYI2 1134 aa24.68■■□□□ 1.54
SNX1-206ENST00000559389 FAM86B1E9PN63 330 aa24.68■■□□□ 1.54
SNX1-206ENST00000559389 DUSP11O75319 330 aaKnown RBP24.68■■□□□ 1.54
SNX1-206ENST00000559389 FAM86B2P0C5J1 330 aa24.68■■□□□ 1.54
SNX1-206ENST00000559389 U2AF2P26368 475 aaKnown RBP eCLIP24.68■■□□□ 1.54
SNX1-206ENST00000559389 GJA8P48165 433 aa24.68■■□□□ 1.54
SNX1-206ENST00000559389 USP11P51784 963 aa24.68■■□□□ 1.54
SNX1-206ENST00000559389 MTMR1Q13613 665 aa24.68■■□□□ 1.54
SNX1-206ENST00000559389 KCNV1Q6PIU1 500 aa24.68■■□□□ 1.54
SNX1-206ENST00000559389 NIPA1Q7RTP0 329 aa24.68■■□□□ 1.54
SNX1-206ENST00000559389 NEK8Q86SG6 692 aa24.68■■□□□ 1.54
SNX1-206ENST00000559389 TMEM106CQ9BVX2 250 aa24.68■■□□□ 1.54
SNX1-206ENST00000559389 SYNRGQ9UMZ2 1314 aa24.67■■□□□ 1.54
SNX1-206ENST00000559389 NKRFO15226 690 aaKnown RBP eCLIP24.67■■□□□ 1.54
SNX1-206ENST00000559389 SGPL1O95470 568 aa24.67■■□□□ 1.54
SNX1-206ENST00000559389 TXNP10599 105 aaKnown RBP24.67■■□□□ 1.54
SNX1-206ENST00000559389 TGFB3P10600 412 aa24.67■■□□□ 1.54
SNX1-206ENST00000559389 SYT1P21579 422 aa24.67■■□□□ 1.54
SNX1-206ENST00000559389 UBA1P22314 1058 aaKnown RBP24.67■■□□□ 1.54
SNX1-206ENST00000559389 PTGS1P23219 599 aa24.67■■□□□ 1.54
SNX1-206ENST00000559389 ZNF76P36508 570 aa24.67■■□□□ 1.54
Retrieved 100 of 20,778 RNA–protein pairs in 49 ms