RNA–Protein interactions for RNA: ENST00000542354.1

TRAV1-1-201, Transcript of T cell receptor alpha variable 1-1, humanhuman

APPRIS P1 BASIC

Gene TRAV1-1, Length 392 nt, Biotype TR V gene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAV1-1-201ENST00000542354 XYLBO75191 536 aa3□□□□□ -1.93
TRAV1-1-201ENST00000542354 CA3P07451 260 aa3□□□□□ -1.93
TRAV1-1-201ENST00000542354 CYP2C8P10632 490 aa3□□□□□ -1.93
TRAV1-1-201ENST00000542354 XRCC5P13010 732 aaKnown RBP3□□□□□ -1.93
TRAV1-1-201ENST00000542354 HOXD8P13378 290 aaPredicted RBP3□□□□□ -1.93
TRAV1-1-201ENST00000542354 CCND3P30281 292 aaPredicted RBP3□□□□□ -1.93
TRAV1-1-201ENST00000542354 INPP5BP32019 993 aa3□□□□□ -1.93
TRAV1-1-201ENST00000542354 ITGAEP38570 1179 aa3□□□□□ -1.93
TRAV1-1-201ENST00000542354 ARL4DP49703 201 aa3□□□□□ -1.93
TRAV1-1-201ENST00000542354 CLCN5P51795 746 aa3□□□□□ -1.93
TRAV1-1-201ENST00000542354 PPIL2Q13356 520 aa3□□□□□ -1.93
TRAV1-1-201ENST00000542354 ANGPT1Q15389 498 aa3□□□□□ -1.93
TRAV1-1-201ENST00000542354 SMAD2Q15796 467 aaKnown RBP3□□□□□ -1.93
TRAV1-1-201ENST00000542354 AMOTQ4VCS5 1084 aa3□□□□□ -1.93
TRAV1-1-201ENST00000542354 SH3PXD2AQ5TCZ1 1133 aa3□□□□□ -1.93
TRAV1-1-201ENST00000542354 RNF43Q68DV7 783 aa3□□□□□ -1.93
TRAV1-1-201ENST00000542354 ANKRD34AQ69YU3 496 aa3□□□□□ -1.93
TRAV1-1-201ENST00000542354 GDF6Q6KF10 455 aaPredicted RBP3□□□□□ -1.93
TRAV1-1-201ENST00000542354 ZNF530Q6P9A1 599 aaPredicted RBP3□□□□□ -1.93
TRAV1-1-201ENST00000542354 EP400NLQ6ZTU2 488 aa3□□□□□ -1.93
TRAV1-1-201ENST00000542354 KRT25Q7Z3Z0 450 aa3□□□□□ -1.93
TRAV1-1-201ENST00000542354 KRTAP19-1Q8IUB9 90 aa3□□□□□ -1.93
TRAV1-1-201ENST00000542354 CLEC10AQ8IUN9 316 aa3□□□□□ -1.93
TRAV1-1-201ENST00000542354 TSEN2Q8NCE0 465 aaKnown RBP3□□□□□ -1.93
TRAV1-1-201ENST00000542354 TRIB2Q92519 343 aa3□□□□□ -1.93
TRAV1-1-201ENST00000542354 WNT8BQ93098 351 aa3□□□□□ -1.93
TRAV1-1-201ENST00000542354 METTL22Q9BUU2 404 aaPredicted RBP3□□□□□ -1.93
TRAV1-1-201ENST00000542354 YIPF2Q9BWQ6 316 aa3□□□□□ -1.93
TRAV1-1-201ENST00000542354 VEZTQ9HBM0 779 aa3□□□□□ -1.93
TRAV1-1-201ENST00000542354 BSDC1Q9NW68 430 aaPredicted RBP3□□□□□ -1.93
TRAV1-1-201ENST00000542354 GJD2Q9UKL4 321 aa3□□□□□ -1.93
TRAV1-1-201ENST00000542354 COG6Q9Y2V7 657 aa3□□□□□ -1.93
TRAV1-1-201ENST00000542354 SLC4A7Q9Y6M7 1214 aa3□□□□□ -1.93
TRAV1-1-201ENST00000542354 PCNX1Q96RV3 2341 aa3□□□□□ -1.93
TRAV1-1-201ENST00000542354 MGAMO43451 1857 aa3□□□□□ -1.93
TRAV1-1-201ENST00000542354 ZNF804BA4D1E1 1349 aa2.99□□□□□ -1.93
TRAV1-1-201ENST00000542354 ABCC4O15439 1325 aa2.99□□□□□ -1.93
TRAV1-1-201ENST00000542354 TNKSO95271 1327 aa2.99□□□□□ -1.93
TRAV1-1-201ENST00000542354 DOCK3Q8IZD9 2030 aa2.99□□□□□ -1.93
TRAV1-1-201ENST00000542354 KRTAP4-8A0A0G2JLE6 195 aa2.99□□□□□ -1.93
TRAV1-1-201ENST00000542354 GAS2O43903 313 aaKnown RBP2.99□□□□□ -1.93
TRAV1-1-201ENST00000542354 LPXNO60711 386 aa2.99□□□□□ -1.93
TRAV1-1-201ENST00000542354 DEAF1O75398 565 aaPredicted RBP2.99□□□□□ -1.93
TRAV1-1-201ENST00000542354 MICAL2O94851 1124 aa2.99□□□□□ -1.93
TRAV1-1-201ENST00000542354 PDGFBP01127 241 aaPredicted RBP2.99□□□□□ -1.93
TRAV1-1-201ENST00000542354 A1BGP04217 495 aa2.99□□□□□ -1.93
TRAV1-1-201ENST00000542354 RPLP1P05386 114 aaKnown RBP2.99□□□□□ -1.93
TRAV1-1-201ENST00000542354 ACRP10323 421 aa2.99□□□□□ -1.93
TRAV1-1-201ENST00000542354 CSF2RAP15509 400 aa2.99□□□□□ -1.93
TRAV1-1-201ENST00000542354 ATP2A2P16615 1042 aaKnown RBP2.99□□□□□ -1.93
TRAV1-1-201ENST00000542354 ZKSCAN1P17029 563 aaPredicted RBP2.99□□□□□ -1.93
TRAV1-1-201ENST00000542354 JUNBP17275 347 aaPredicted RBP2.99□□□□□ -1.93
TRAV1-1-201ENST00000542354 CYP2B6P20813 491 aa2.99□□□□□ -1.93
TRAV1-1-201ENST00000542354 CD68P34810 354 aaPredicted RBP2.99□□□□□ -1.93
TRAV1-1-201ENST00000542354 CLDN10P78369 228 aa2.99□□□□□ -1.93
TRAV1-1-201ENST00000542354 PPATQ06203 517 aa2.99□□□□□ -1.93
TRAV1-1-201ENST00000542354 HYAL2Q12891 473 aa2.99□□□□□ -1.93
TRAV1-1-201ENST00000542354 SLC39A6Q13433 755 aa2.99□□□□□ -1.93
TRAV1-1-201ENST00000542354 GRIK5Q16478 980 aa2.99□□□□□ -1.93
TRAV1-1-201ENST00000542354 GJC2Q5T442 439 aaPredicted RBP2.99□□□□□ -1.93
TRAV1-1-201ENST00000542354 FDX2Q6P4F2 183 aa2.99□□□□□ -1.93
TRAV1-1-201ENST00000542354 ZNF790Q6PG37 636 aa2.99□□□□□ -1.93
TRAV1-1-201ENST00000542354 C19orf48Q6RUI8 117 aa2.99□□□□□ -1.93
TRAV1-1-201ENST00000542354 ACAD11Q709F0 780 aa2.99□□□□□ -1.93
TRAV1-1-201ENST00000542354 DDX46Q7L014 1031 aaKnown RBP2.99□□□□□ -1.93
TRAV1-1-201ENST00000542354 ZC3HAV1Q7Z2W4 902 aaKnown RBP2.99□□□□□ -1.93
TRAV1-1-201ENST00000542354 DTX1Q86Y01 620 aa2.99□□□□□ -1.93
TRAV1-1-201ENST00000542354 GOLGA6L2Q8N9W4 650 aaPredicted RBP2.99□□□□□ -1.93
TRAV1-1-201ENST00000542354 AGBL5Q8NDL9 886 aa2.99□□□□□ -1.93
TRAV1-1-201ENST00000542354 NETO1Q8TDF5 533 aa2.99□□□□□ -1.93
TRAV1-1-201ENST00000542354 SMCR8Q8TEV9 937 aaPredicted RBP2.99□□□□□ -1.93
TRAV1-1-201ENST00000542354 ZCCHC14Q8WYQ9 949 aaKnown RBP2.99□□□□□ -1.93
TRAV1-1-201ENST00000542354 PABPC5Q96DU9 382 aaKnown RBP2.99□□□□□ -1.93
TRAV1-1-201ENST00000542354 BORCS6Q96GS4 357 aa2.99□□□□□ -1.93
TRAV1-1-201ENST00000542354 MYO19Q96H55 970 aa2.99□□□□□ -1.93
TRAV1-1-201ENST00000542354 TERF2IPQ9NYB0 399 aa2.99□□□□□ -1.93
TRAV1-1-201ENST00000542354 POLLQ9UGP5 575 aa2.99□□□□□ -1.93
TRAV1-1-201ENST00000542354 DDX20Q9UHI6 824 aaKnown RBP2.99□□□□□ -1.93
TRAV1-1-201ENST00000542354 OAS3Q9Y6K5 1087 aaKnown RBP2.99□□□□□ -1.93
TRAV1-1-201ENST00000542354 R4GN57 208 aa2.99□□□□□ -1.93
TRAV1-1-201ENST00000542354 LRRK2Q5S007 2527 aa2.99□□□□□ -1.93
TRAV1-1-201ENST00000542354 EDC4Q6P2E9 1401 aaKnown RBP2.99□□□□□ -1.93
TRAV1-1-201ENST00000542354 DMXL2Q8TDJ6 3036 aa2.99□□□□□ -1.93
TRAV1-1-201ENST00000542354 ABCC12Q96J65 1359 aa2.99□□□□□ -1.93
TRAV1-1-201ENST00000542354 MYO3BQ8WXR4 1341 aa2.98□□□□□ -1.93
TRAV1-1-201ENST00000542354 ADAMTS20P59510 1910 aa2.98□□□□□ -1.93
TRAV1-1-201ENST00000542354 KIF28PB7ZC32 967 aa2.98□□□□□ -1.93
TRAV1-1-201ENST00000542354 BIN1O00499 593 aa2.98□□□□□ -1.93
TRAV1-1-201ENST00000542354 NCK2O43639 380 aa2.98□□□□□ -1.93
TRAV1-1-201ENST00000542354 PQBP1O60828 265 aaKnown RBP2.98□□□□□ -1.93
TRAV1-1-201ENST00000542354 SASH3O75995 380 aa2.98□□□□□ -1.93
TRAV1-1-201ENST00000542354 CNGA1P29973 690 aa2.98□□□□□ -1.93
TRAV1-1-201ENST00000542354 CDC27P30260 824 aa2.98□□□□□ -1.93
TRAV1-1-201ENST00000542354 ADCYAP1R1P41586 468 aa2.98□□□□□ -1.93
TRAV1-1-201ENST00000542354 HNRNPUQ00839 825 aaKnown RBP eCLIP2.98□□□□□ -1.93
TRAV1-1-201ENST00000542354 TAP1Q03518 808 aa2.98□□□□□ -1.93
TRAV1-1-201ENST00000542354 GRAPQ13588 217 aa2.98□□□□□ -1.93
TRAV1-1-201ENST00000542354 RASA3Q14644 834 aa2.98□□□□□ -1.93
TRAV1-1-201ENST00000542354 DLGAP5Q15398 846 aa2.98□□□□□ -1.93
TRAV1-1-201ENST00000542354 DUOXA2Q1HG44 320 aa2.98□□□□□ -1.93
Retrieved 100 of 20,778 RNA–protein pairs in 15.9 ms