RNA–Protein interactions for RNA: ENST00000471968.1

HDAC3-206, Transcript of histone deacetylase 3, humanhuman

TSL 3

Gene HDAC3, Length 529 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC3-206ENST00000471968 PLCD1P51178 756 aa8.12□□□□□ -1.11
HDAC3-206ENST00000471968 GSTO1P78417 241 aa8.12□□□□□ -1.11
HDAC3-206ENST00000471968 PTPN11Q06124 597 aaPredicted RBP8.12□□□□□ -1.11
HDAC3-206ENST00000471968 FLIIQ13045 1269 aa8.12□□□□□ -1.11
HDAC3-206ENST00000471968 RASGRF1Q13972 1273 aa8.12□□□□□ -1.11
HDAC3-206ENST00000471968 MBTPS1Q14703 1052 aa8.12□□□□□ -1.11
HDAC3-206ENST00000471968 LPAL2Q16609 132 aa8.12□□□□□ -1.11
HDAC3-206ENST00000471968 COL28A1Q2UY09 1125 aa8.12□□□□□ -1.11
HDAC3-206ENST00000471968 SNRNP48Q6IEG0 339 aaKnown RBP8.12□□□□□ -1.11
HDAC3-206ENST00000471968 ANKRD54Q6NXT1 300 aa8.12□□□□□ -1.11
HDAC3-206ENST00000471968 SYCE2Q6PIF2 218 aa8.12□□□□□ -1.11
HDAC3-206ENST00000471968 PRR23CQ6ZRP0 262 aa8.12□□□□□ -1.11
HDAC3-206ENST00000471968 EEPD1Q7L9B9 569 aa8.12□□□□□ -1.11
HDAC3-206ENST00000471968 ANKRD35Q8N283 1001 aa8.12□□□□□ -1.11
HDAC3-206ENST00000471968 CTAGE1Q96RT6 745 aa8.12□□□□□ -1.11
HDAC3-206ENST00000471968 TBC1D17Q9HA65 648 aa8.12□□□□□ -1.11
HDAC3-206ENST00000471968 DLGAP2Q9P1A6 1054 aa8.12□□□□□ -1.11
HDAC3-206ENST00000471968 ADAMTS5Q9UNA0 930 aa8.12□□□□□ -1.11
HDAC3-206ENST00000471968 GPSM3Q9Y4H4 160 aa8.12□□□□□ -1.11
HDAC3-206ENST00000471968 RIPK3Q9Y572 518 aa8.12□□□□□ -1.11
HDAC3-206ENST00000471968 DDX49Q9Y6V7 483 aaKnown RBP8.12□□□□□ -1.11
HDAC3-206ENST00000471968 KRBA1A5PL33 1030 aa8.11□□□□□ -1.11
HDAC3-206ENST00000471968 TBC1D4O60343 1298 aa8.11□□□□□ -1.11
HDAC3-206ENST00000471968 ITGB1P05556 798 aa8.11□□□□□ -1.11
HDAC3-206ENST00000471968 CFHP08603 1231 aa8.11□□□□□ -1.11
HDAC3-206ENST00000471968 SRGAP2BP0DMP2 458 aa8.11□□□□□ -1.11
HDAC3-206ENST00000471968 HOXD8P13378 290 aaPredicted RBP8.11□□□□□ -1.11
HDAC3-206ENST00000471968 CPT1AP50416 773 aa8.11□□□□□ -1.11
HDAC3-206ENST00000471968 TDGQ13569 410 aa8.11□□□□□ -1.11
HDAC3-206ENST00000471968 ZNF528Q3MIS6 628 aa8.11□□□□□ -1.11
HDAC3-206ENST00000471968 IQSEC1Q6DN90 963 aa8.11□□□□□ -1.11
HDAC3-206ENST00000471968 GDF6Q6KF10 455 aaPredicted RBP8.11□□□□□ -1.11
HDAC3-206ENST00000471968 FBXO16Q8IX29 292 aaPredicted RBP8.11□□□□□ -1.11
HDAC3-206ENST00000471968 ZDHHC14Q8IZN3 488 aa8.11□□□□□ -1.11
HDAC3-206ENST00000471968 TSPYL6Q8N831 410 aa8.11□□□□□ -1.11
HDAC3-206ENST00000471968 SPPL3Q8TCT6 385 aa8.11□□□□□ -1.11
HDAC3-206ENST00000471968 MICAL1Q8TDZ2 1067 aa8.11□□□□□ -1.11
HDAC3-206ENST00000471968 POF1BQ8WVV4 589 aa8.11□□□□□ -1.11
HDAC3-206ENST00000471968 MAP4K1Q92918 833 aa8.11□□□□□ -1.11
HDAC3-206ENST00000471968 NSUN4Q96CB9 384 aaKnown RBP8.11□□□□□ -1.11
HDAC3-206ENST00000471968 SUCLG2Q96I99 432 aa8.11□□□□□ -1.11
HDAC3-206ENST00000471968 NOL10Q9BSC4 688 aaKnown RBP8.11□□□□□ -1.11
HDAC3-206ENST00000471968 SEMA4GQ9NTN9 838 aa8.11□□□□□ -1.11
HDAC3-206ENST00000471968 AATFQ9NY61 560 aaKnown RBP eCLIP8.11□□□□□ -1.11
HDAC3-206ENST00000471968 C9orf78Q9NZ63 289 aaPredicted RBP8.11□□□□□ -1.11
HDAC3-206ENST00000471968 DUSP12Q9UNI6 340 aa8.11□□□□□ -1.11
HDAC3-206ENST00000471968 SIT1Q9Y3P8 196 aa8.11□□□□□ -1.11
HDAC3-206ENST00000471968 CFAP46Q8IYW2 2715 aa8.11□□□□□ -1.11
HDAC3-206ENST00000471968 ADGRA3Q8IWK6 1321 aa8.1□□□□□ -1.11
HDAC3-206ENST00000471968 MPHOSPH10O00566 681 aaKnown RBP8.1□□□□□ -1.11
HDAC3-206ENST00000471968 KCNK5O95279 499 aa8.1□□□□□ -1.11
HDAC3-206ENST00000471968 TOP3BO95985 862 aaKnown RBP8.1□□□□□ -1.11
HDAC3-206ENST00000471968 MMP3P08254 477 aa8.1□□□□□ -1.11
HDAC3-206ENST00000471968 CNTN2Q02246 1040 aa8.1□□□□□ -1.11
HDAC3-206ENST00000471968 CSTF1Q05048 431 aaKnown RBP8.1□□□□□ -1.11
HDAC3-206ENST00000471968 RBL2Q08999 1139 aa8.1□□□□□ -1.11
HDAC3-206ENST00000471968 TRIM26Q12899 539 aaPredicted RBP8.1□□□□□ -1.11
HDAC3-206ENST00000471968 ATP2B3Q16720 1220 aa8.1□□□□□ -1.11
HDAC3-206ENST00000471968 BEND3Q5T5X7 828 aa8.1□□□□□ -1.11
HDAC3-206ENST00000471968 ZNF618Q5T7W0 954 aa8.1□□□□□ -1.11
HDAC3-206ENST00000471968 PSAPL1Q6NUJ1 521 aa8.1□□□□□ -1.11
HDAC3-206ENST00000471968 TAPT1Q6NXT6 567 aa8.1□□□□□ -1.11
HDAC3-206ENST00000471968 LLGL2Q6P1M3 1020 aa8.1□□□□□ -1.11
HDAC3-206ENST00000471968 TRAF7Q6Q0C0 670 aa8.1□□□□□ -1.11
HDAC3-206ENST00000471968 REPS2Q8NFH8 660 aa8.1□□□□□ -1.11
HDAC3-206ENST00000471968 SPATA18Q8TC71 538 aa8.1□□□□□ -1.11
HDAC3-206ENST00000471968 CLP1Q92989 425 aaKnown RBP8.1□□□□□ -1.11
HDAC3-206ENST00000471968 KAZALD1Q96I82 304 aa8.1□□□□□ -1.11
HDAC3-206ENST00000471968 PLVAPQ9BX97 442 aa8.1□□□□□ -1.11
HDAC3-206ENST00000471968 TEX13BQ9BXU2 312 aa8.1□□□□□ -1.11
HDAC3-206ENST00000471968 CA14Q9ULX7 337 aa8.1□□□□□ -1.11
HDAC3-206ENST00000471968 RAI2Q9Y5P3 530 aa8.1□□□□□ -1.11
HDAC3-206ENST00000471968 SPTAN1Q13813 2472 aaKnown RBP8.1□□□□□ -1.11
HDAC3-206ENST00000471968 LOC101059915A0A1B0GWI6 518 aaPredicted RBP8.09□□□□□ -1.11
HDAC3-206ENST00000471968 F6X3S4 739 aa8.09□□□□□ -1.11
HDAC3-206ENST00000471968 LAMTOR5O43504 91 aa8.09□□□□□ -1.11
HDAC3-206ENST00000471968 NARSO43776 548 aaKnown RBP8.09□□□□□ -1.11
HDAC3-206ENST00000471968 ZNF853P0CG23 659 aa8.09□□□□□ -1.11
HDAC3-206ENST00000471968 GLULP15104 373 aa8.09□□□□□ -1.11
HDAC3-206ENST00000471968 DUSP6Q16828 381 aa8.09□□□□□ -1.11
HDAC3-206ENST00000471968 CCDC102BQ68D86 513 aa8.09□□□□□ -1.11
HDAC3-206ENST00000471968 KIAA1211Q6ZU35 1233 aa8.09□□□□□ -1.11
HDAC3-206ENST00000471968 CCDC146Q8IYE0 955 aa8.09□□□□□ -1.11
HDAC3-206ENST00000471968 PLCD3Q8N3E9 789 aa8.09□□□□□ -1.11
HDAC3-206ENST00000471968 ZBTB44Q8NCP5 570 aa8.09□□□□□ -1.11
HDAC3-206ENST00000471968 P2RX5Q93086 422 aa8.09□□□□□ -1.11
HDAC3-206ENST00000471968 RUNDC1Q96C34 613 aa8.09□□□□□ -1.11
HDAC3-206ENST00000471968 NECTIN4Q96NY8 510 aa8.09□□□□□ -1.11
HDAC3-206ENST00000471968 BICC1Q9H694 974 aaKnown RBP8.09□□□□□ -1.11
HDAC3-206ENST00000471968 RXFP3Q9NSD7 469 aa8.09□□□□□ -1.11
HDAC3-206ENST00000471968 SPATA6Q9NWH7 488 aaPredicted RBP8.09□□□□□ -1.11
HDAC3-206ENST00000471968 ZSCAN32Q9NX65 697 aa8.09□□□□□ -1.11
HDAC3-206ENST00000471968 RAI14Q9P0K7 980 aa8.09□□□□□ -1.11
HDAC3-206ENST00000471968 SERPINB13Q9UIV8 391 aa8.09□□□□□ -1.11
HDAC3-206ENST00000471968 FBXO4Q9UKT5 387 aa8.09□□□□□ -1.11
HDAC3-206ENST00000471968 RAB23Q9ULC3 237 aa8.09□□□□□ -1.11
HDAC3-206ENST00000471968 PPP1R9AQ9ULJ8 1098 aa8.09□□□□□ -1.11
HDAC3-206ENST00000471968 WASF3Q9UPY6 502 aa8.09□□□□□ -1.11
HDAC3-206ENST00000471968 SCN10AQ9Y5Y9 1956 aa8.09□□□□□ -1.11
HDAC3-206ENST00000471968 EMSYQ7Z589 1322 aa8.08□□□□□ -1.12
Retrieved 100 of 20,778 RNA–protein pairs in 38.2 ms