RNA–Protein interactions for RNA: ENST00000469336.1

UBE3C-204, Transcript of ubiquitin protein ligase E3C, humanhuman

TSL 2

Gene UBE3C, Length 655 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBE3C-204ENST00000469336 USP53Q70EK8 1073 aa7.81□□□□□ -1.16
UBE3C-204ENST00000469336 SLCO6A1Q86UG4 719 aa7.81□□□□□ -1.16
UBE3C-204ENST00000469336 GSTCDQ8NEC7 633 aa7.81□□□□□ -1.16
UBE3C-204ENST00000469336 JMJD8Q96S16 334 aa7.81□□□□□ -1.16
UBE3C-204ENST00000469336 ZFYVE21Q9BQ24 234 aa7.81□□□□□ -1.16
UBE3C-204ENST00000469336 TMX1Q9H3N1 280 aa7.81□□□□□ -1.16
UBE3C-204ENST00000469336 CNTD2Q9H8S5 307 aa7.81□□□□□ -1.16
UBE3C-204ENST00000469336 GPR27Q9NS67 375 aa7.81□□□□□ -1.16
UBE3C-204ENST00000469336 SIRT5Q9NXA8 310 aa7.81□□□□□ -1.16
UBE3C-204ENST00000469336 SFMBT1Q9UHJ3 866 aa7.81□□□□□ -1.16
UBE3C-204ENST00000469336 CD2APQ9Y5K6 639 aa7.81□□□□□ -1.16
UBE3C-204ENST00000469336 TAF6LQ9Y6J9 622 aa7.81□□□□□ -1.16
UBE3C-204ENST00000469336 TTBK1Q5TCY1 1321 aaPredicted RBP7.8□□□□□ -1.16
UBE3C-204ENST00000469336 BLACEA4D250 179 aa7.8□□□□□ -1.16
UBE3C-204ENST00000469336 ARNTLO00327 626 aa7.8□□□□□ -1.16
UBE3C-204ENST00000469336 GALNT18Q6P9A2 607 aa7.8□□□□□ -1.16
UBE3C-204ENST00000469336 CCDC103Q8IW40 242 aa7.8□□□□□ -1.16
UBE3C-204ENST00000469336 NUP43Q8NFH3 380 aa7.8□□□□□ -1.16
UBE3C-204ENST00000469336 DIO2Q92813 273 aa7.8□□□□□ -1.16
UBE3C-204ENST00000469336 IMPACTQ9P2X3 320 aa7.8□□□□□ -1.16
UBE3C-204ENST00000469336 TMEFF2Q9UIK5 374 aaPredicted RBP7.8□□□□□ -1.16
UBE3C-204ENST00000469336 NUDT19A8MXV4 375 aa7.79□□□□□ -1.16
UBE3C-204ENST00000469336 RAPGEF3O95398 923 aa7.79□□□□□ -1.16
UBE3C-204ENST00000469336 BMP7P18075 431 aa7.79□□□□□ -1.16
UBE3C-204ENST00000469336 PABPC4Q13310 644 aaKnown RBP eCLIP7.79□□□□□ -1.16
UBE3C-204ENST00000469336 CBX2Q14781 532 aaPredicted RBP7.79□□□□□ -1.16
UBE3C-204ENST00000469336 NINJ1Q92982 152 aa7.79□□□□□ -1.16
UBE3C-204ENST00000469336 PHF20Q9BVI0 1012 aa7.79□□□□□ -1.16
UBE3C-204ENST00000469336 KLHL14Q9P2G3 628 aa7.79□□□□□ -1.16
UBE3C-204ENST00000469336 NDOR1Q9UHB4 597 aa7.79□□□□□ -1.16
UBE3C-204ENST00000469336 SBNO2Q9Y2G9 1366 aa7.79□□□□□ -1.16
UBE3C-204ENST00000469336 A0A1W2PQ45 241 aaPredicted RBP7.78□□□□□ -1.16
UBE3C-204ENST00000469336 A0A1W2PQY0 241 aa7.78□□□□□ -1.16
UBE3C-204ENST00000469336 WTIPA6NIX2 430 aaPredicted RBP7.78□□□□□ -1.16
UBE3C-204ENST00000469336 AQP7O14520 342 aa7.78□□□□□ -1.16
UBE3C-204ENST00000469336 CDR1P51861 262 aa7.78□□□□□ -1.16
UBE3C-204ENST00000469336 GYS2P54840 703 aa7.78□□□□□ -1.16
UBE3C-204ENST00000469336 ERVFRD-1P60508 538 aa7.78□□□□□ -1.16
UBE3C-204ENST00000469336 LAPTM5Q13571 262 aa7.78□□□□□ -1.16
UBE3C-204ENST00000469336 DALRD3Q5D0E6 543 aaKnown RBP7.78□□□□□ -1.16
UBE3C-204ENST00000469336 SLC7A14Q8TBB6 771 aa7.78□□□□□ -1.16
UBE3C-204ENST00000469336 C20orf173Q96LM9 149 aa7.78□□□□□ -1.16
UBE3C-204ENST00000469336 SLC52A2Q9HAB3 445 aa7.78□□□□□ -1.16
UBE3C-204ENST00000469336 TRIM39Q9HCM9 518 aa7.78□□□□□ -1.16
UBE3C-204ENST00000469336 EPB41L4AQ9HCS5 686 aaPredicted RBP7.78□□□□□ -1.16
UBE3C-204ENST00000469336 WDR3Q9UNX4 943 aaKnown RBP eCLIP7.78□□□□□ -1.16
UBE3C-204ENST00000469336 PRKAB1Q9Y478 270 aa7.78□□□□□ -1.16
UBE3C-204ENST00000469336 MSL3P1P0C860 447 aa7.77□□□□□ -1.17
UBE3C-204ENST00000469336 NAT1P18440 290 aa7.77□□□□□ -1.17
UBE3C-204ENST00000469336 HOXA5P20719 270 aa7.77□□□□□ -1.17
UBE3C-204ENST00000469336 NCKAP1LP55160 1127 aa7.77□□□□□ -1.17
UBE3C-204ENST00000469336 GPR85P60893 370 aa7.77□□□□□ -1.17
UBE3C-204ENST00000469336 YBX1P67809 324 aaKnown RBP7.77□□□□□ -1.17
UBE3C-204ENST00000469336 CYP4F8P98187 520 aa7.77□□□□□ -1.17
UBE3C-204ENST00000469336 RAB3GAP1Q15042 981 aa7.77□□□□□ -1.17
UBE3C-204ENST00000469336 INF2Q27J81 1249 aa7.77□□□□□ -1.17
UBE3C-204ENST00000469336 VMACQ2NL98 169 aa7.77□□□□□ -1.17
UBE3C-204ENST00000469336 MBLAC2Q68D91 279 aa7.77□□□□□ -1.17
UBE3C-204ENST00000469336 ZNF662Q6ZS27 426 aa7.77□□□□□ -1.17
UBE3C-204ENST00000469336 PUM2Q8TB72 1066 aaKnown RBP eCLIP7.77□□□□□ -1.17
UBE3C-204ENST00000469336 MFSD3Q96ES6 412 aa7.77□□□□□ -1.17
UBE3C-204ENST00000469336 CLUHP3Q96NS8 147 aa7.77□□□□□ -1.17
UBE3C-204ENST00000469336 ASXL2Q76L83 1435 aa7.77□□□□□ -1.17
UBE3C-204ENST00000469336 LOC101059915A0A1B0GWI6 518 aaPredicted RBP7.76□□□□□ -1.17
UBE3C-204ENST00000469336 CORO7P57737 925 aa7.76□□□□□ -1.17
UBE3C-204ENST00000469336 TM4SF20Q53R12 229 aa7.76□□□□□ -1.17
UBE3C-204ENST00000469336 ZNF385BQ569K4 471 aa7.76□□□□□ -1.17
UBE3C-204ENST00000469336 KCNT2Q6UVM3 1135 aa7.76□□□□□ -1.17
UBE3C-204ENST00000469336 TMC6Q7Z403 805 aa7.76□□□□□ -1.17
UBE3C-204ENST00000469336 BRAPQ7Z569 592 aa7.76□□□□□ -1.17
UBE3C-204ENST00000469336 CPNE8Q86YQ8 564 aa7.76□□□□□ -1.17
UBE3C-204ENST00000469336 JAMLQ86YT9 394 aa7.76□□□□□ -1.17
UBE3C-204ENST00000469336 NIM1KQ8IY84 436 aa7.76□□□□□ -1.17
UBE3C-204ENST00000469336 IFNL3Q8IZI9 196 aa7.76□□□□□ -1.17
UBE3C-204ENST00000469336 RCBTB1Q8NDN9 531 aa7.76□□□□□ -1.17
UBE3C-204ENST00000469336 SIGLEC10Q96LC7 697 aa7.76□□□□□ -1.17
UBE3C-204ENST00000469336 INTS7Q9NVH2 962 aaKnown RBP7.76□□□□□ -1.17
UBE3C-204ENST00000469336 ACSL6Q9UKU0 697 aa7.76□□□□□ -1.17
UBE3C-204ENST00000469336 IRAK3Q9Y616 596 aa7.76□□□□□ -1.17
UBE3C-204ENST00000469336 C7orf72A4D263 438 aa7.75□□□□□ -1.17
UBE3C-204ENST00000469336 N4BP3O15049 544 aa7.75□□□□□ -1.17
UBE3C-204ENST00000469336 MYO1BO43795 1136 aa7.75□□□□□ -1.17
UBE3C-204ENST00000469336 NPHS1O60500 1241 aa7.75□□□□□ -1.17
UBE3C-204ENST00000469336 MPOP05164 745 aa7.75□□□□□ -1.17
UBE3C-204ENST00000469336 LCP1P13796 627 aa7.75□□□□□ -1.17
UBE3C-204ENST00000469336 MVKQ03426 396 aa7.75□□□□□ -1.17
UBE3C-204ENST00000469336 TCERG1LQ5VWI1 586 aa7.75□□□□□ -1.17
UBE3C-204ENST00000469336 LBX2Q6XYB7 198 aa7.75□□□□□ -1.17
UBE3C-204ENST00000469336 TMEFF1Q8IYR6 380 aa7.75□□□□□ -1.17
UBE3C-204ENST00000469336 TNFRSF12AQ9NP84 129 aa7.75□□□□□ -1.17
UBE3C-204ENST00000469336 MAGEC2Q9UBF1 373 aaPredicted RBP7.75□□□□□ -1.17
UBE3C-204ENST00000469336 TRAF6Q9Y4K3 522 aa7.75□□□□□ -1.17
UBE3C-204ENST00000469336 ANKRD62A6NC57 917 aa7.74□□□□□ -1.17
UBE3C-204ENST00000469336 HRKO00198 91 aa7.74□□□□□ -1.17
UBE3C-204ENST00000469336 TRIM13O60858 407 aa7.74□□□□□ -1.17
UBE3C-204ENST00000469336 ARL4AP40617 200 aa7.74□□□□□ -1.17
UBE3C-204ENST00000469336 GTF2A2P52657 109 aa7.74□□□□□ -1.17
UBE3C-204ENST00000469336 RPL11P62913 178 aaKnown RBP7.74□□□□□ -1.17
UBE3C-204ENST00000469336 RNF187Q5TA31 235 aaPredicted RBP7.74□□□□□ -1.17
UBE3C-204ENST00000469336 RPTNQ6XPR3 784 aa7.74□□□□□ -1.17
Retrieved 100 of 20,778 RNA–protein pairs in 28.5 ms