RNA–Protein interactions for RNA: ENST00000413574.6

CSNK1E-206, Transcript of casein kinase 1 epsilon, humanhuman

TSL 5 BASIC

Gene CSNK1E, Length 1,631 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSNK1E-206ENST00000413574 RTEL1Q9NZ71 1219 aa34.94■■■■□ 3.18
CSNK1E-206ENST00000413574 CNGA1P29973 690 aa34.93■■■■□ 3.18
CSNK1E-206ENST00000413574 SREBF1P36956 1147 aa34.93■■■■□ 3.18
CSNK1E-206ENST00000413574 PCNX4Q63HM2 1172 aa34.93■■■■□ 3.18
CSNK1E-206ENST00000413574 TNFRSF25Q93038 417 aa34.93■■■■□ 3.18
CSNK1E-206ENST00000413574 FAM205CA6NFA0 338 aa34.92■■■■□ 3.18
CSNK1E-206ENST00000413574 SAFBQ15424 915 aaKnown RBP eCLIP34.92■■■■□ 3.18
CSNK1E-206ENST00000413574 MCTP2Q6DN12 878 aa34.92■■■■□ 3.18
CSNK1E-206ENST00000413574 H3BQV1 296 aa34.92■■■■□ 3.18
CSNK1E-206ENST00000413574 EIF3JO75822 258 aaKnown RBP34.92■■■■□ 3.18
CSNK1E-206ENST00000413574 RGS20O76081 388 aa34.92■■■■□ 3.18
CSNK1E-206ENST00000413574 ARHGAP4P98171 946 aa34.92■■■■□ 3.18
CSNK1E-206ENST00000413574 IFFO2Q5TF58 517 aa34.92■■■■□ 3.18
CSNK1E-206ENST00000413574 TAPT1Q6NXT6 567 aa34.92■■■■□ 3.18
CSNK1E-206ENST00000413574 HMX1Q9NP08 348 aaPredicted RBP34.92■■■■□ 3.18
CSNK1E-206ENST00000413574 VTA1Q9NP79 307 aa34.92■■■■□ 3.18
CSNK1E-206ENST00000413574 CCL5P13501 91 aa34.91■■■■□ 3.18
CSNK1E-206ENST00000413574 TMEM63BQ5T3F8 832 aa34.91■■■■□ 3.18
CSNK1E-206ENST00000413574 SEPT14Q6ZU15 432 aa34.91■■■■□ 3.18
CSNK1E-206ENST00000413574 PIK3AP1Q6ZUJ8 805 aa34.91■■■■□ 3.18
CSNK1E-206ENST00000413574 TBCKQ8TEA7 893 aa34.91■■■■□ 3.18
CSNK1E-206ENST00000413574 CRYGNQ8WXF5 182 aa34.91■■■■□ 3.18
CSNK1E-206ENST00000413574 CCDC194A0A1B0GVG4 234 aa34.9■■■■□ 3.18
CSNK1E-206ENST00000413574 EDIL3O43854 480 aa34.9■■■■□ 3.18
CSNK1E-206ENST00000413574 CCDC144BQ3MJ40 725 aa34.9■■■■□ 3.18
CSNK1E-206ENST00000413574 KRT25Q7Z3Z0 450 aa34.9■■■■□ 3.18
CSNK1E-206ENST00000413574 KIF28PB7ZC32 967 aa34.89■■■■□ 3.18
CSNK1E-206ENST00000413574 ADCYAP1R1P41586 468 aa34.89■■■■□ 3.18
CSNK1E-206ENST00000413574 ANO1Q5XXA6 986 aa34.89■■■■□ 3.18
CSNK1E-206ENST00000413574 NRBP1Q9UHY1 535 aa34.89■■■■□ 3.18
CSNK1E-206ENST00000413574 C11orf97A0A1B0GVM6 126 aaPredicted RBP34.88■■■■□ 3.17
CSNK1E-206ENST00000413574 ADCY6O43306 1168 aa34.88■■■■□ 3.17
CSNK1E-206ENST00000413574 SYT1P21579 422 aa34.88■■■■□ 3.17
CSNK1E-206ENST00000413574 NONOQ15233 471 aaKnown RBP eCLIP34.88■■■■□ 3.17
CSNK1E-206ENST00000413574 INF2Q27J81 1249 aa34.88■■■■□ 3.17
CSNK1E-206ENST00000413574 CYP2W1Q8TAV3 490 aa34.88■■■■□ 3.17
CSNK1E-206ENST00000413574 PTGS1P23219 599 aa34.88■■■■□ 3.17
CSNK1E-206ENST00000413574 LENG1Q96BZ8 264 aaPredicted RBP34.88■■■■□ 3.17
CSNK1E-206ENST00000413574 XRN2Q9H0D6 950 aaKnown RBP eCLIP34.88■■■■□ 3.172e-6■■■■□ 25.6
CSNK1E-206ENST00000413574 RNF208Q9H0X6 261 aa34.88■■■■□ 3.17
CSNK1E-206ENST00000413574 ITGB5P18084 799 aa34.87■■■■□ 3.17
CSNK1E-206ENST00000413574 MCTP1Q6DN14 999 aa34.87■■■■□ 3.17
CSNK1E-206ENST00000413574 XRRA1Q6P2D8 792 aa34.87■■■■□ 3.17
CSNK1E-206ENST00000413574 VPS37CA5D8V6 355 aaPredicted RBP34.86■■■■□ 3.17
CSNK1E-206ENST00000413574 SEPT4O43236 478 aa34.86■■■■□ 3.17
CSNK1E-206ENST00000413574 PDCP20941 246 aa34.86■■■■□ 3.17
CSNK1E-206ENST00000413574 ANP32AP39687 249 aaKnown RBP34.86■■■■□ 3.17
CSNK1E-206ENST00000413574 FOXP1Q9H334 677 aaPredicted RBP34.86■■■■□ 3.17
CSNK1E-206ENST00000413574 RBM19Q9Y4C8 960 aaKnown RBP34.86■■■■□ 3.17
CSNK1E-206ENST00000413574 GNL2Q13823 731 aaKnown RBP34.85■■■■□ 3.17
CSNK1E-206ENST00000413574 INPP4AQ96PE3 977 aaPredicted RBP34.85■■■■□ 3.17
CSNK1E-206ENST00000413574 WDR11Q9BZH6 1224 aa34.85■■■■□ 3.17
CSNK1E-206ENST00000413574 UBIAD1Q9Y5Z9 338 aa34.85■■■■□ 3.17
CSNK1E-206ENST00000413574 FAM86B1E9PN63 330 aa34.84■■■■□ 3.17
CSNK1E-206ENST00000413574 ARIH2O95376 493 aa34.84■■■■□ 3.17
CSNK1E-206ENST00000413574 CYP3A4P08684 503 aa34.84■■■■□ 3.17
CSNK1E-206ENST00000413574 FAM86B2P0C5J1 330 aa34.84■■■■□ 3.17
CSNK1E-206ENST00000413574 ZNF76P36508 570 aa34.84■■■■□ 3.17
CSNK1E-206ENST00000413574 PAK6Q9NQU5 681 aaPredicted RBP34.84■■■■□ 3.17
CSNK1E-206ENST00000413574 FAM184BQ9ULE4 1060 aa34.84■■■■□ 3.17
CSNK1E-206ENST00000413574 FRMPD3Q5JV73 1810 aa34.84■■■■□ 3.17
CSNK1E-206ENST00000413574 RBM47A0AV96 593 aaKnown RBP34.84■■■■□ 3.17
CSNK1E-206ENST00000413574 STAM2O75886 525 aa34.84■■■■□ 3.17
CSNK1E-206ENST00000413574 AKR1A1P14550 325 aa34.84■■■■□ 3.17
CSNK1E-206ENST00000413574 GJC2Q5T442 439 aaPredicted RBP34.84■■■■□ 3.17
CSNK1E-206ENST00000413574 DOCK5Q9H7D0 1870 aa34.83■■■■□ 3.17
CSNK1E-206ENST00000413574 SMPD1P17405 629 aa34.83■■■■□ 3.17
CSNK1E-206ENST00000413574 U2AF2P26368 475 aaKnown RBP eCLIP34.83■■■■□ 3.17
CSNK1E-206ENST00000413574 TNS4Q8IZW8 715 aa34.83■■■■□ 3.17
CSNK1E-206ENST00000413574 MXRA8Q9BRK3 442 aa34.83■■■■□ 3.17
CSNK1E-206ENST00000413574 DDX20Q9UHI6 824 aaKnown RBP34.83■■■■□ 3.17
CSNK1E-206ENST00000413574 TNFAIP2Q03169 654 aa34.82■■■■□ 3.16
CSNK1E-206ENST00000413574 SEMA3FQ13275 785 aa34.82■■■■□ 3.16
CSNK1E-206ENST00000413574 CEP55Q53EZ4 464 aa34.82■■■■□ 3.16
CSNK1E-206ENST00000413574 NOSTRINQ8IVI9 506 aa34.82■■■■□ 3.16
CSNK1E-206ENST00000413574 SCFD2Q8WU76 684 aa34.82■■■■□ 3.16
CSNK1E-206ENST00000413574 DEFB118Q96PH6 123 aa34.82■■■■□ 3.16
CSNK1E-206ENST00000413574 MRVI1Q9Y6F6 885 aa34.82■■■■□ 3.16
CSNK1E-206ENST00000413574 USP11P51784 963 aa34.81■■■■□ 3.16
CSNK1E-206ENST00000413574 LY6KQ17RY6 165 aa34.81■■■■□ 3.16
CSNK1E-206ENST00000413574 LETM2Q2VYF4 491 aa34.81■■■■□ 3.16
CSNK1E-206ENST00000413574 IQSEC1Q6DN90 963 aa34.81■■■■□ 3.16
CSNK1E-206ENST00000413574 ABHD8Q96I13 439 aa34.81■■■■□ 3.16
CSNK1E-206ENST00000413574 JADE2Q9NQC1 790 aa34.81■■■■□ 3.16
CSNK1E-206ENST00000413574 TXNP10599 105 aaKnown RBP34.81■■■■□ 3.16
CSNK1E-206ENST00000413574 GNPTABQ3T906 1256 aa34.81■■■■□ 3.16
CSNK1E-206ENST00000413574 LHX8Q68G74 356 aa34.81■■■■□ 3.16
CSNK1E-206ENST00000413574 CCDC62Q6P9F0 684 aa34.81■■■■□ 3.16
CSNK1E-206ENST00000413574 COPS5Q92905 334 aa34.81■■■■□ 3.16
CSNK1E-206ENST00000413574 STX6O43752 255 aa34.8■■■■□ 3.16
CSNK1E-206ENST00000413574 TDP2O95551 362 aa34.8■■■■□ 3.16
CSNK1E-206ENST00000413574 SP2Q02086 613 aa34.8■■■■□ 3.16
CSNK1E-206ENST00000413574 TTLL4Q14679 1199 aa34.8■■■■□ 3.16
CSNK1E-206ENST00000413574 NEK8Q86SG6 692 aa34.8■■■■□ 3.16
CSNK1E-206ENST00000413574 NLRX1Q86UT6 975 aa34.8■■■■□ 3.16
CSNK1E-206ENST00000413574 FERMT3Q86UX7 667 aa34.8■■■■□ 3.16
CSNK1E-206ENST00000413574 UIMC1Q96RL1 719 aa34.8■■■■□ 3.16
CSNK1E-206ENST00000413574 MTMR6Q9Y217 621 aa34.8■■■■□ 3.16
CSNK1E-206ENST00000413574 IGLV3-22A0A075B6J6 115 aa34.79■■■■□ 3.16
CSNK1E-206ENST00000413574 WNT7AO00755 349 aa34.79■■■■□ 3.16
Retrieved 100 of 20,778 RNA–protein pairs in 21.4 ms