RNA–Protein interactions for RNA: ENST00000399352.5

ITSN1-209, Transcript of intersectin 1, humanhuman

TSL 1 (best) BASIC

Gene ITSN1, Length 5,408 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ITSN1-209ENST00000399352 CACNB1Q02641 598 aaPredicted RBP17.48■□□□□ 0.39
ITSN1-209ENST00000399352 SLC12A1Q13621 1099 aa17.48■□□□□ 0.39
ITSN1-209ENST00000399352 LINC00301Q8NCQ3 95 aa17.48■□□□□ 0.39
ITSN1-209ENST00000399352 RNF14Q9UBS8 474 aa17.48■□□□□ 0.39
ITSN1-209ENST00000399352 PLCB4Q15147 1175 aa17.48■□□□□ 0.39
ITSN1-209ENST00000399352 DHTKD1Q96HY7 919 aaPredicted RBP17.48■□□□□ 0.39
ITSN1-209ENST00000399352 FAM135BQ49AJ0 1406 aa17.48■□□□□ 0.39
ITSN1-209ENST00000399352 SLMAPQ14BN4 828 aa17.48■□□□□ 0.39
ITSN1-209ENST00000399352 MAN2A1Q16706 1144 aa17.48■□□□□ 0.39
ITSN1-209ENST00000399352 CC2D1AQ6P1N0 951 aaPredicted RBP17.48■□□□□ 0.39
ITSN1-209ENST00000399352 LRRC47Q8N1G4 583 aaKnown RBP17.48■□□□□ 0.39
ITSN1-209ENST00000399352 TUBB6Q9BUF5 446 aa17.48■□□□□ 0.39
ITSN1-209ENST00000399352 PCDHA13Q9Y5I0 950 aa17.48■□□□□ 0.39
ITSN1-209ENST00000399352 BLMP54132 1417 aaPredicted RBP17.48■□□□□ 0.39
ITSN1-209ENST00000399352 ACSL3O95573 720 aa17.48■□□□□ 0.39
ITSN1-209ENST00000399352 BASP1P80723 227 aaKnown RBP17.48■□□□□ 0.39
ITSN1-209ENST00000399352 C4orf50Q6ZRC1 276 aa17.48■□□□□ 0.39
ITSN1-209ENST00000399352 CC2D2AQ9P2K1 1620 aa17.47■□□□□ 0.39
ITSN1-209ENST00000399352 CREB3O43889 395 aa17.47■□□□□ 0.39
ITSN1-209ENST00000399352 CPP00450 1065 aa17.47■□□□□ 0.39
ITSN1-209ENST00000399352 TNNC2P02585 160 aa17.47■□□□□ 0.39
ITSN1-209ENST00000399352 MUM1L1Q5H9M0 696 aa17.47■□□□□ 0.39
ITSN1-209ENST00000399352 PDZD4Q76G19 769 aaPredicted RBP17.47■□□□□ 0.39
ITSN1-209ENST00000399352 MYLK4Q86YV6 388 aaPredicted RBP17.47■□□□□ 0.39
ITSN1-209ENST00000399352 SLFN12Q8IYM2 578 aa17.47■□□□□ 0.39
ITSN1-209ENST00000399352 RASGRP4Q8TDF6 673 aa17.47■□□□□ 0.39
ITSN1-209ENST00000399352 PBKQ96KB5 322 aa17.47■□□□□ 0.39
ITSN1-209ENST00000399352 MAPK13O15264 365 aa17.47■□□□□ 0.39
ITSN1-209ENST00000399352 GFPT2O94808 682 aa17.47■□□□□ 0.39
ITSN1-209ENST00000399352 MMEP08473 750 aa17.47■□□□□ 0.39
ITSN1-209ENST00000399352 LARP4BQ92615 738 aaKnown RBP17.47■□□□□ 0.39
ITSN1-209ENST00000399352 HESX1Q9UBX0 185 aa17.47■□□□□ 0.39
ITSN1-209ENST00000399352 ORC6Q9Y5N6 252 aa17.47■□□□□ 0.39
ITSN1-209ENST00000399352 FANCAO15360 1455 aa17.47■□□□□ 0.39
ITSN1-209ENST00000399352 YTHDC2Q9H6S0 1430 aaKnown RBP17.47■□□□□ 0.39
ITSN1-209ENST00000399352 GOLGA8QA0A0J9YX86 632 aa17.47■□□□□ 0.39
ITSN1-209ENST00000399352 GOLGA8OA6NCC3 632 aa17.47■□□□□ 0.39
ITSN1-209ENST00000399352 GOLGA8NF8WBI6 632 aa17.47■□□□□ 0.39
ITSN1-209ENST00000399352 DR1Q01658 176 aa17.47■□□□□ 0.39
ITSN1-209ENST00000399352 CCHCR1Q8TD31 782 aa17.47■□□□□ 0.39
ITSN1-209ENST00000399352 FGD4Q96M96 766 aa17.47■□□□□ 0.39
ITSN1-209ENST00000399352 RCOR1Q9UKL0 485 aa17.47■□□□□ 0.39
ITSN1-209ENST00000399352 IFRD2Q12894 506 aaPredicted RBP17.47■□□□□ 0.39
ITSN1-209ENST00000399352 ODR4Q5SWX8 454 aa17.47■□□□□ 0.39
ITSN1-209ENST00000399352 EMBQ6PCB8 327 aa17.47■□□□□ 0.39
ITSN1-209ENST00000399352 GSPT2Q8IYD1 628 aaKnown RBP17.47■□□□□ 0.39
ITSN1-209ENST00000399352 METTL13Q8N6R0 699 aa17.47■□□□□ 0.39
ITSN1-209ENST00000399352 ZMYM3Q14202 1370 aa17.46■□□□□ 0.39
ITSN1-209ENST00000399352 CDC25AP30304 524 aa17.46■□□□□ 0.39
ITSN1-209ENST00000399352 PIK3CAP42336 1068 aa17.46■□□□□ 0.39
ITSN1-209ENST00000399352 MFAP3P55082 362 aa17.46■□□□□ 0.39
ITSN1-209ENST00000399352 ZBED6P86452 979 aa17.46■□□□□ 0.39
ITSN1-209ENST00000399352 ART3Q13508 389 aa17.46■□□□□ 0.39
ITSN1-209ENST00000399352 CUL4AQ13619 759 aa17.46■□□□□ 0.39
ITSN1-209ENST00000399352 ZNF658Q5TYW1 1059 aaPredicted RBP17.46■□□□□ 0.39
ITSN1-209ENST00000399352 ENOX1Q8TC92 643 aaKnown RBP17.46■□□□□ 0.39
ITSN1-209ENST00000399352 GPHNQ9NQX3 736 aaPredicted RBP17.46■□□□□ 0.39
ITSN1-209ENST00000399352 GPATCH8Q9UKJ3 1502 aaKnown RBP17.46■□□□□ 0.39
ITSN1-209ENST00000399352 AFPP02771 609 aaKnown RBP17.46■□□□□ 0.39
ITSN1-209ENST00000399352 ACTN1P12814 892 aa17.46■□□□□ 0.39
ITSN1-209ENST00000399352 EIF4A1P60842 406 aaKnown RBP17.46■□□□□ 0.39
ITSN1-209ENST00000399352 PABPC4Q13310 644 aaKnown RBP eCLIP17.46■□□□□ 0.39
ITSN1-209ENST00000399352 TRAIPQ9BWF2 469 aa17.46■□□□□ 0.39
ITSN1-209ENST00000399352 THOC2Q8NI27 1593 aaKnown RBP17.46■□□□□ 0.39
ITSN1-209ENST00000399352 SRGAP2O75044 1071 aa17.46■□□□□ 0.39
ITSN1-209ENST00000399352 GGCXP38435 758 aa17.46■□□□□ 0.39
ITSN1-209ENST00000399352 EIF3BP55884 814 aaKnown RBP17.46■□□□□ 0.39
ITSN1-209ENST00000399352 GNPTABQ3T906 1256 aa17.46■□□□□ 0.39
ITSN1-209ENST00000399352 MAP7D3Q8IWC1 876 aa17.46■□□□□ 0.39
ITSN1-209ENST00000399352 TNRQ92752 1358 aa17.46■□□□□ 0.39
ITSN1-209ENST00000399352 A6NJR5 290 aa17.46■□□□□ 0.39
ITSN1-209ENST00000399352 CYP21A2P08686 494 aa17.46■□□□□ 0.39
ITSN1-209ENST00000399352 TMEM191BP0C7N4 346 aa17.46■□□□□ 0.39
ITSN1-209ENST00000399352 KIF11P52732 1056 aa17.46■□□□□ 0.39
ITSN1-209ENST00000399352 TBC1D10BQ4KMP7 808 aaPredicted RBP17.46■□□□□ 0.39
ITSN1-209ENST00000399352 FAM47EQ6ZV65 393 aa17.46■□□□□ 0.39
ITSN1-209ENST00000399352 NT5C1BQ96P26 610 aa17.46■□□□□ 0.39
ITSN1-209ENST00000399352 PITPNM3Q9BZ71 974 aa17.46■□□□□ 0.39
ITSN1-209ENST00000399352 MED23Q9ULK4 1368 aa17.46■□□□□ 0.39
ITSN1-209ENST00000399352 A0A0G2JND7 137 aa17.46■□□□□ 0.38
ITSN1-209ENST00000399352 KMT5BQ4FZB7 885 aa17.46■□□□□ 0.38
ITSN1-209ENST00000399352 SKA2Q8WVK7 121 aaPredicted RBP17.46■□□□□ 0.38
ITSN1-209ENST00000399352 PANX2Q96RD6 677 aa17.46■□□□□ 0.38
ITSN1-209ENST00000399352 SLC52A2Q9HAB3 445 aa17.46■□□□□ 0.38
ITSN1-209ENST00000399352 KIF23Q02241 960 aaPredicted RBP17.45■□□□□ 0.38
ITSN1-209ENST00000399352 AOC3Q16853 763 aa17.45■□□□□ 0.38
ITSN1-209ENST00000399352 TOGARAM2Q6ZUX3 1019 aa17.45■□□□□ 0.38
ITSN1-209ENST00000399352 ZNF496Q96IT1 587 aaPredicted RBP17.45■□□□□ 0.38
ITSN1-209ENST00000399352 PCDHB4Q9Y5E5 795 aa17.45■□□□□ 0.38
ITSN1-209ENST00000399352 MAST3O60307 1309 aa17.45■□□□□ 0.38
ITSN1-209ENST00000399352 GNL3Q9BVP2 549 aaKnown RBP eCLIP17.45■□□□□ 0.38
ITSN1-209ENST00000399352 FOXP1Q9H334 677 aaPredicted RBP17.45■□□□□ 0.38
ITSN1-209ENST00000399352 KCNG1Q9UIX4 513 aa17.45■□□□□ 0.38
ITSN1-209ENST00000399352 EIF2AK4Q9P2K8 1649 aaKnown RBP17.45■□□□□ 0.38
ITSN1-209ENST00000399352 SPAG7O75391 227 aa17.45■□□□□ 0.38
ITSN1-209ENST00000399352 KRT1P04264 644 aa17.45■□□□□ 0.38
ITSN1-209ENST00000399352 SLFN14P0C7P3 912 aa17.45■□□□□ 0.38
ITSN1-209ENST00000399352 PLS3P13797 630 aa17.45■□□□□ 0.38
ITSN1-209ENST00000399352 C6orf118Q5T5N4 469 aa17.45■□□□□ 0.38
ITSN1-209ENST00000399352 SYT2Q8N9I0 419 aaPredicted RBP17.45■□□□□ 0.38
Retrieved 100 of 20,778 RNA–protein pairs in 97.8 ms